RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.65□□□□□ -0.22
RN7SKP249-201ENST00000365490 WASHC2AQ641Q2 1341 aa13.64□□□□□ -0.23
RN7SKP249-201ENST00000365490 ADGRB2O60241 1585 aa13.64□□□□□ -0.23
RN7SKP249-201ENST00000365490 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
RN7SKP249-201ENST00000365490 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
RN7SKP249-201ENST00000365490 KIF7Q2M1P5 1343 aa13.64□□□□□ -0.23
RN7SKP249-201ENST00000365490 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
RN7SKP249-201ENST00000365490 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.23
RN7SKP249-201ENST00000365490 TULP4Q9NRJ4 1543 aa13.63□□□□□ -0.23
RN7SKP249-201ENST00000365490 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
RN7SKP249-201ENST00000365490 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
RN7SKP249-201ENST00000365490 CDCA8Q53HL2 280 aa13.62□□□□□ -0.23
RN7SKP249-201ENST00000365490 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
RN7SKP249-201ENST00000365490 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP249-201ENST00000365490 PROSER2Q86WR7 435 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP249-201ENST00000365490 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
RN7SKP249-201ENST00000365490 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
RN7SKP249-201ENST00000365490 NALCNQ8IZF0 1738 aa13.59□□□□□ -0.23
RN7SKP249-201ENST00000365490 ADGRL3Q9HAR2 1447 aa13.59□□□□□ -0.23
RN7SKP249-201ENST00000365490 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
RN7SKP249-201ENST00000365490 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
RN7SKP249-201ENST00000365490 XIRP1Q702N8 1843 aaKnown RBP13.58□□□□□ -0.24
RN7SKP249-201ENST00000365490 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
RN7SKP249-201ENST00000365490 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
RN7SKP249-201ENST00000365490 C19orf44Q9H6X5 657 aa13.57□□□□□ -0.24
RN7SKP249-201ENST00000365490 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
RN7SKP249-201ENST00000365490 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
RN7SKP249-201ENST00000365490 DCCP43146 1447 aa13.56□□□□□ -0.24
RN7SKP249-201ENST00000365490 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
RN7SKP249-201ENST00000365490 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
RN7SKP249-201ENST00000365490 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
RN7SKP249-201ENST00000365490 ANKARQ7Z5J8 1434 aa13.54□□□□□ -0.24
RN7SKP249-201ENST00000365490 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
RN7SKP249-201ENST00000365490 MYOM1P52179 1685 aa13.53□□□□□ -0.24
RN7SKP249-201ENST00000365490 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
RN7SKP249-201ENST00000365490 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
RN7SKP249-201ENST00000365490 PRR36Q9H6K5 1346 aa13.53□□□□□ -0.24
RN7SKP249-201ENST00000365490 ATP7BP35670 1465 aa13.53□□□□□ -0.24
RN7SKP249-201ENST00000365490 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.25
RN7SKP249-201ENST00000365490 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
RN7SKP249-201ENST00000365490 MSH6P52701 1360 aa13.51□□□□□ -0.25
RN7SKP249-201ENST00000365490 PLEKHG3A1L390 1219 aa13.51□□□□□ -0.25
RN7SKP249-201ENST00000365490 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
RN7SKP249-201ENST00000365490 SLC12A5Q9H2X9 1139 aa13.51□□□□□ -0.25
RN7SKP249-201ENST00000365490 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
RN7SKP249-201ENST00000365490 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
RN7SKP249-201ENST00000365490 PER1O15534 1290 aaPredicted RBP13.49□□□□□ -0.25
RN7SKP249-201ENST00000365490 ATF3P18847 181 aa13.49□□□□□ -0.25
RN7SKP249-201ENST00000365490 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
RN7SKP249-201ENST00000365490 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
RN7SKP249-201ENST00000365490 CD163L1Q9NR16 1453 aa13.48□□□□□ -0.25
RN7SKP249-201ENST00000365490 MST1RQ04912 1400 aa13.48□□□□□ -0.25
RN7SKP249-201ENST00000365490 PPIP5K1Q6PFW1 1433 aa13.48□□□□□ -0.25
RN7SKP249-201ENST00000365490 ITSN1Q15811 1721 aa13.48□□□□□ -0.25
RN7SKP249-201ENST00000365490 PANK3Q9H999 370 aa13.48□□□□□ -0.25
RN7SKP249-201ENST00000365490 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
RN7SKP249-201ENST00000365490 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
RN7SKP249-201ENST00000365490 TMC1Q8TDI8 760 aa13.47□□□□□ -0.25
RN7SKP249-201ENST00000365490 C1orf167Q5SNV9 1468 aa13.47□□□□□ -0.25
RN7SKP249-201ENST00000365490 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
RN7SKP249-201ENST00000365490 NUTM2FA1L443 756 aa13.46□□□□□ -0.25
RN7SKP249-201ENST00000365490 CARD14Q9BXL6 1004 aa13.46□□□□□ -0.25
RN7SKP249-201ENST00000365490 IQSEC2Q5JU85 1478 aa13.45□□□□□ -0.26
RN7SKP249-201ENST00000365490 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
RN7SKP249-201ENST00000365490 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
RN7SKP249-201ENST00000365490 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
RN7SKP249-201ENST00000365490 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
RN7SKP249-201ENST00000365490 SLAIN2Q9P270 581 aa13.44□□□□□ -0.26
RN7SKP249-201ENST00000365490 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
RN7SKP249-201ENST00000365490 ACEP12821 1306 aa13.43□□□□□ -0.26
RN7SKP249-201ENST00000365490 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
RN7SKP249-201ENST00000365490 SSH2Q76I76 1423 aa13.42□□□□□ -0.26
RN7SKP249-201ENST00000365490 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
RN7SKP249-201ENST00000365490 HDGFL2Q7Z4V5 671 aaPredicted RBP13.42□□□□□ -0.26
RN7SKP249-201ENST00000365490 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
RN7SKP249-201ENST00000365490 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
RN7SKP249-201ENST00000365490 KIF1AQ12756 1690 aa13.41□□□□□ -0.26
RN7SKP249-201ENST00000365490 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
RN7SKP249-201ENST00000365490 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
RN7SKP249-201ENST00000365490 NPC1L1Q9UHC9 1359 aa13.41□□□□□ -0.26
RN7SKP249-201ENST00000365490 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
RN7SKP249-201ENST00000365490 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
RN7SKP249-201ENST00000365490 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
RN7SKP249-201ENST00000365490 USP6P35125 1406 aa13.39□□□□□ -0.27
RN7SKP249-201ENST00000365490 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
RN7SKP249-201ENST00000365490 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
RN7SKP249-201ENST00000365490 NGDNQ8NEJ9 315 aaKnown RBP13.39□□□□□ -0.27
RN7SKP249-201ENST00000365490 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
RN7SKP249-201ENST00000365490 NSD3Q9BZ95 1437 aa13.39□□□□□ -0.27
RN7SKP249-201ENST00000365490 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
RN7SKP249-201ENST00000365490 FOXO3O43524 673 aa13.37□□□□□ -0.27
RN7SKP249-201ENST00000365490 FYB1O15117 783 aa13.36□□□□□ -0.27
RN7SKP249-201ENST00000365490 TOM1O60784 492 aa13.36□□□□□ -0.27
RN7SKP249-201ENST00000365490 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
RN7SKP249-201ENST00000365490 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
RN7SKP249-201ENST00000365490 TTC21AQ8NDW8 1320 aa13.36□□□□□ -0.27
RN7SKP249-201ENST00000365490 NSD2O96028 1365 aa13.35□□□□□ -0.27
RN7SKP249-201ENST00000365490 PSME1Q06323 249 aa13.35□□□□□ -0.27
RN7SKP249-201ENST00000365490 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
RN7SKP249-201ENST00000365490 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 463.3 ms