RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 FOXO3O43524 673 aa7.72□□□□□ -1.17
RNU1-43P-201ENST00000365052 ADAMTS2O95450 1211 aa7.72□□□□□ -1.17
RNU1-43P-201ENST00000365052 PRAM1Q96QH2 718 aa7.72□□□□□ -1.17
RNU1-43P-201ENST00000365052 POGKQ9P215 609 aa7.72□□□□□ -1.17
RNU1-43P-201ENST00000365052 SPATA31A6Q5VVP1 1343 aa7.72□□□□□ -1.17
RNU1-43P-201ENST00000365052 ASXL1Q8IXJ9 1541 aa7.72□□□□□ -1.17
RNU1-43P-201ENST00000365052 LRPPRCP42704 1394 aaKnown RBP7.71□□□□□ -1.17
RNU1-43P-201ENST00000365052 YTHDC2Q9H6S0 1430 aaKnown RBP7.71□□□□□ -1.17
RNU1-43P-201ENST00000365052 C8orf37Q96NL8 207 aa7.71□□□□□ -1.18
RNU1-43P-201ENST00000365052 HIRIP3Q9BW71 556 aaPredicted RBP7.71□□□□□ -1.18
RNU1-43P-201ENST00000365052 IFT172Q9UG01 1749 aa7.71□□□□□ -1.18
RNU1-43P-201ENST00000365052 ABCC11Q96J66 1382 aa7.71□□□□□ -1.18
RNU1-43P-201ENST00000365052 LRP6O75581 1613 aa7.7□□□□□ -1.18
RNU1-43P-201ENST00000365052 AHDC1Q5TGY3 1603 aaPredicted RBP7.7□□□□□ -1.18
RNU1-43P-201ENST00000365052 PTCH1Q13635 1447 aa7.7□□□□□ -1.18
RNU1-43P-201ENST00000365052 NGLY1Q96IV0 654 aa7.7□□□□□ -1.18
RNU1-43P-201ENST00000365052 AFF2P51816 1311 aa7.7□□□□□ -1.18
RNU1-43P-201ENST00000365052 PIK3C2GO75747 1445 aa7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 NEUROD1Q13562 356 aa7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 ZNF772Q68DY9 489 aaPredicted RBP7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 LMOD2Q6P5Q4 547 aa7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 KRT28Q7Z3Y7 464 aa7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 PMFBP1Q8TBY8 1022 aa7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 SIN3AQ96ST3 1273 aa7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 QTRT2Q9H974 415 aaKnown RBP7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 SOS2Q07890 1332 aaPredicted RBP7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 MINK1Q8N4C8 1332 aaPredicted RBP7.69□□□□□ -1.18
RNU1-43P-201ENST00000365052 NHSL1Q5SYE7 1610 aa7.68□□□□□ -1.18
RNU1-43P-201ENST00000365052 SHPRHQ149N8 1683 aa7.68□□□□□ -1.18
RNU1-43P-201ENST00000365052 RXRBP28702 533 aa7.68□□□□□ -1.18
RNU1-43P-201ENST00000365052 SIRT1Q96EB6 747 aa7.68□□□□□ -1.18
RNU1-43P-201ENST00000365052 PNPLA6Q8IY17 1366 aa7.68□□□□□ -1.18
RNU1-43P-201ENST00000365052 PHF8Q9UPP1 1060 aa7.67□□□□□ -1.18
RNU1-43P-201ENST00000365052 NPHP3Q7Z494 1330 aa7.67□□□□□ -1.18
RNU1-43P-201ENST00000365052 RGPD8O14715 1765 aaPredicted RBP7.66□□□□□ -1.18
RNU1-43P-201ENST00000365052 PSME1Q06323 249 aa7.66□□□□□ -1.18
RNU1-43P-201ENST00000365052 NBPF1Q3BBV0 1214 aa7.66□□□□□ -1.18
RNU1-43P-201ENST00000365052 CABLES1Q8TDN4 633 aa7.66□□□□□ -1.18
RNU1-43P-201ENST00000365052 TECPR2O15040 1411 aa7.66□□□□□ -1.18
RNU1-43P-201ENST00000365052 MYOM2P54296 1465 aa7.66□□□□□ -1.18
RNU1-43P-201ENST00000365052 HAP1P54257 671 aaPredicted RBP7.65□□□□□ -1.18
RNU1-43P-201ENST00000365052 STAC3Q96MF2 364 aa7.65□□□□□ -1.18
RNU1-43P-201ENST00000365052 USP21Q9UK80 565 aa7.65□□□□□ -1.18
RNU1-43P-201ENST00000365052 NRXN1Q9ULB1 1477 aa7.65□□□□□ -1.18
RNU1-43P-201ENST00000365052 KNDC1Q76NI1 1749 aa7.64□□□□□ -1.19
RNU1-43P-201ENST00000365052 PRAG1Q86YV5 1406 aa7.64□□□□□ -1.19
RNU1-43P-201ENST00000365052 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
RNU1-43P-201ENST00000365052 L3MBTL2Q969R5 705 aa7.64□□□□□ -1.19
RNU1-43P-201ENST00000365052 CDC42BPGQ6DT37 1551 aa7.63□□□□□ -1.19
RNU1-43P-201ENST00000365052 SPATA31A3Q5VYP0 1347 aa7.63□□□□□ -1.19
RNU1-43P-201ENST00000365052 PAK3O75914 559 aaPredicted RBP7.63□□□□□ -1.19
RNU1-43P-201ENST00000365052 RBM6P78332 1123 aaKnown RBP7.63□□□□□ -1.19
RNU1-43P-201ENST00000365052 NGDNQ8NEJ9 315 aaKnown RBP7.63□□□□□ -1.19
RNU1-43P-201ENST00000365052 CDK19Q9BWU1 502 aa7.63□□□□□ -1.19
RNU1-43P-201ENST00000365052 FMN2Q9NZ56 1722 aa7.63□□□□□ -1.19
RNU1-43P-201ENST00000365052 PRR36Q9H6K5 1346 aa7.62□□□□□ -1.19
RNU1-43P-201ENST00000365052 NUDT16Q96DE0 195 aaKnown RBP7.62□□□□□ -1.19
RNU1-43P-201ENST00000365052 LAMC1P11047 1609 aa7.62□□□□□ -1.19
RNU1-43P-201ENST00000365052 ADGRB1O14514 1584 aa7.62□□□□□ -1.19
RNU1-43P-201ENST00000365052 PXDNQ92626 1479 aa7.62□□□□□ -1.19
RNU1-43P-201ENST00000365052 NUTM2GQ5VZR2 741 aa7.61□□□□□ -1.19
RNU1-43P-201ENST00000365052 FNBP4Q8N3X1 1017 aaPredicted RBP7.61□□□□□ -1.19
RNU1-43P-201ENST00000365052 UPF1Q92900 1129 aaKnown RBP eCLIP7.61□□□□□ -1.19
RNU1-43P-201ENST00000365052 TRPC5Q9UL62 973 aaPredicted RBP7.61□□□□□ -1.19
RNU1-43P-201ENST00000365052 CCDC9Q9Y3X0 531 aaKnown RBP7.6□□□□□ -1.19
RNU1-43P-201ENST00000365052 DLC1Q96QB1 1528 aa7.6□□□□□ -1.19
RNU1-43P-201ENST00000365052 FAM83GA6ND36 823 aa7.59□□□□□ -1.19
RNU1-43P-201ENST00000365052 SRPK2P78362 688 aaKnown RBP7.59□□□□□ -1.19
RNU1-43P-201ENST00000365052 TRIM26Q12899 539 aaPredicted RBP7.59□□□□□ -1.19
RNU1-43P-201ENST00000365052 CABP2Q9NPB3 220 aa7.59□□□□□ -1.19
RNU1-43P-201ENST00000365052 GPRASP1Q5JY77 1395 aa7.59□□□□□ -1.2
RNU1-43P-201ENST00000365052 KIF1AQ12756 1690 aa7.58□□□□□ -1.2
RNU1-43P-201ENST00000365052 NBPF8Q3BBV2 869 aa7.58□□□□□ -1.2
RNU1-43P-201ENST00000365052 UNC5CLQ8IV45 518 aa7.58□□□□□ -1.2
RNU1-43P-201ENST00000365052 GJD4Q96KN9 370 aaPredicted RBP7.58□□□□□ -1.2
RNU1-43P-201ENST00000365052 USP32Q8NFA0 1604 aa7.58□□□□□ -1.2
RNU1-43P-201ENST00000365052 TNS3Q68CZ2 1445 aa7.58□□□□□ -1.2
RNU1-43P-201ENST00000365052 ACEP12821 1306 aa7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 CENPJQ9HC77 1338 aaPredicted RBP7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 COL22A1Q8NFW1 1626 aaPredicted RBP7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 ZC3H6P61129 1189 aaKnown RBP7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 CCDC61Q9Y6R9 512 aa7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 RGS12O14924 1447 aa7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 ANKARQ7Z5J8 1434 aa7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 ARHGEF28Q8N1W1 1705 aaKnown RBP7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 SBNO1A3KN83 1393 aa7.57□□□□□ -1.2
RNU1-43P-201ENST00000365052 BCL9LQ86UU0 1499 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 ATRNO75882 1429 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 A0A0G2JS52 829 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 ZBTB7CA1YPR0 619 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 MYT1Q01538 1121 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 CHRNA2Q15822 529 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 BTG4Q9NY30 223 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 CABP1Q9NZU7 370 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 TULP4Q9NRJ4 1543 aa7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 EIF3AQ14152 1382 aaKnown RBP7.56□□□□□ -1.2
RNU1-43P-201ENST00000365052 MARF1Q9Y4F3 1742 aaKnown RBP7.55□□□□□ -1.2
RNU1-43P-201ENST00000365052 ABTB2Q8N961 1025 aa7.55□□□□□ -1.2
RNU1-43P-201ENST00000365052 ARHGEF10O15013 1369 aa7.55□□□□□ -1.2
RNU1-43P-201ENST00000365052 ADGRB2O60241 1585 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms