RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 USB1Q9BQ65 265 aaKnown RBP4.55□□□□□ -1.68
RNU4-41P-201ENST00000364426 PRDM9Q9NQV7 894 aa4.55□□□□□ -1.68
RNU4-41P-201ENST00000364426 CD2BP2O95400 341 aaKnown RBP4.54□□□□□ -1.68
RNU4-41P-201ENST00000364426 MYT1Q01538 1121 aa4.54□□□□□ -1.68
RNU4-41P-201ENST00000364426 AMHR2Q16671 573 aa4.54□□□□□ -1.68
RNU4-41P-201ENST00000364426 PKDCCQ504Y2 493 aa4.54□□□□□ -1.68
RNU4-41P-201ENST00000364426 REPIN1Q9BWE0 567 aaKnown RBP4.53□□□□□ -1.68
RNU4-41P-201ENST00000364426 TOR4AQ9NXH8 423 aa4.53□□□□□ -1.68
RNU4-41P-201ENST00000364426 TNFRSF10AO00220 468 aa4.52□□□□□ -1.69
RNU4-41P-201ENST00000364426 ZBTB24O43167 697 aaPredicted RBP4.52□□□□□ -1.69
RNU4-41P-201ENST00000364426 AVPP01185 164 aa4.52□□□□□ -1.69
RNU4-41P-201ENST00000364426 CRIPAKQ8N1N5 446 aa4.52□□□□□ -1.69
RNU4-41P-201ENST00000364426 ZC3H15Q8WU90 426 aaKnown RBP4.52□□□□□ -1.69
RNU4-41P-201ENST00000364426 HLA-CQ95604 372 aa4.52□□□□□ -1.69
RNU4-41P-201ENST00000364426 FAM187AA6NFU0 413 aa4.51□□□□□ -1.69
RNU4-41P-201ENST00000364426 WNT7AO00755 349 aa4.51□□□□□ -1.69
RNU4-41P-201ENST00000364426 SSTR3P32745 418 aaPredicted RBP4.51□□□□□ -1.69
RNU4-41P-201ENST00000364426 TRIM32Q13049 653 aa4.51□□□□□ -1.69
RNU4-41P-201ENST00000364426 RETREG3Q86VR2 466 aa4.51□□□□□ -1.69
RNU4-41P-201ENST00000364426 NUTM1Q86Y26 1132 aa4.51□□□□□ -1.69
RNU4-41P-201ENST00000364426 KRI1Q8N9T8 703 aaKnown RBP4.51□□□□□ -1.69
RNU4-41P-201ENST00000364426 JUNDP17535 347 aa4.5□□□□□ -1.69
RNU4-41P-201ENST00000364426 GJA5P36382 358 aa4.5□□□□□ -1.69
RNU4-41P-201ENST00000364426 SMCPP49901 116 aaPredicted RBP4.5□□□□□ -1.69
RNU4-41P-201ENST00000364426 GUCA2AQ02747 115 aa4.5□□□□□ -1.69
RNU4-41P-201ENST00000364426 FOXC1Q12948 553 aa4.5□□□□□ -1.69
RNU4-41P-201ENST00000364426 ZNF787Q6DD87 383 aa4.5□□□□□ -1.69
RNU4-41P-201ENST00000364426 AAASQ9NRG9 546 aa4.5□□□□□ -1.69
RNU4-41P-201ENST00000364426 FDX1P10109 184 aa4.49□□□□□ -1.69
RNU4-41P-201ENST00000364426 WNT7BP56706 349 aa4.49□□□□□ -1.69
RNU4-41P-201ENST00000364426 CTC1Q2NKJ3 1217 aa4.49□□□□□ -1.69
RNU4-41P-201ENST00000364426 GIGYF2Q6Y7W6 1299 aaKnown RBP4.49□□□□□ -1.69
RNU4-41P-201ENST00000364426 CYP4X1Q8N118 509 aa4.49□□□□□ -1.69
RNU4-41P-201ENST00000364426 SPIRE2Q8WWL2 714 aa4.49□□□□□ -1.69
RNU4-41P-201ENST00000364426 PCDHGC3Q9UN70 934 aa4.49□□□□□ -1.69
RNU4-41P-201ENST00000364426 SNIP1Q8TAD8 396 aaKnown RBP4.48□□□□□ -1.69
RNU4-41P-201ENST00000364426 SPDYE5A6NIY4 337 aa4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 TRIM66O15016 1216 aa4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 TTLL12Q14166 644 aaPredicted RBP4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 DIXDC1Q155Q3 683 aa4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 DESI1Q6ICB0 168 aa4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 PARP9Q8IXQ6 854 aa4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 SYMPKQ92797 1274 aaKnown RBP4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 AK7Q96M32 723 aa4.47□□□□□ -1.69
RNU4-41P-201ENST00000364426 MOXD2PA6NHM9 499 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 ST8SIA5O15466 376 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 SMPD1P17405 629 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 SKOR1P84550 965 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 PTPRNQ16849 979 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 MRGPRX2Q96LB1 330 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 NUDT12Q9BQG2 462 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 BEGAINQ9BUH8 593 aa4.46□□□□□ -1.7
RNU4-41P-201ENST00000364426 TTC24A2A3L6 582 aaPredicted RBP4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 POTECB2RU33 542 aa4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 C6orf229H3BNL8 230 aa4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 CCNYL3P0C7X3 344 aa4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 MS4A1P11836 297 aa4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 MTMR2Q13614 643 aa4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 RC3H1Q5TC82 1133 aaKnown RBP4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 CCDC24Q8N4L8 307 aa4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 ZNF775Q96BV0 537 aaPredicted RBP4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 EVA1BQ9NVM1 165 aa4.45□□□□□ -1.7
RNU4-41P-201ENST00000364426 AXIN1O15169 862 aa4.44□□□□□ -1.7
RNU4-41P-201ENST00000364426 SPTLC1O15269 473 aa4.44□□□□□ -1.7
RNU4-41P-201ENST00000364426 NDUFV2P19404 249 aa4.44□□□□□ -1.7
RNU4-41P-201ENST00000364426 TUSC1Q2TAM9 212 aa4.44□□□□□ -1.7
RNU4-41P-201ENST00000364426 PTCRAQ6ISU1 281 aaPredicted RBP4.44□□□□□ -1.7
RNU4-41P-201ENST00000364426 RSBN1LQ6PCB5 846 aaPredicted RBP4.44□□□□□ -1.7
RNU4-41P-201ENST00000364426 TBC1D2Q9BYX2 928 aa4.44□□□□□ -1.7
RNU4-41P-201ENST00000364426 J3QL48 77 aa4.43□□□□□ -1.7
RNU4-41P-201ENST00000364426 SIAH2O43255 324 aa4.43□□□□□ -1.7
RNU4-41P-201ENST00000364426 PRPF38BQ5VTL8 546 aaKnown RBP4.43□□□□□ -1.7
RNU4-41P-201ENST00000364426 PRR7Q8TB68 274 aa4.43□□□□□ -1.7
RNU4-41P-201ENST00000364426 PDE4DQ08499 809 aa4.42□□□□□ -1.7
RNU4-41P-201ENST00000364426 KCNH2Q12809 1159 aa4.42□□□□□ -1.7
RNU4-41P-201ENST00000364426 MPNDQ8N594 471 aa4.42□□□□□ -1.7
RNU4-41P-201ENST00000364426 DACH1Q9UI36 760 aa4.42□□□□□ -1.7
RNU4-41P-201ENST00000364426 SH3BP2P78314 561 aa4.41□□□□□ -1.7
RNU4-41P-201ENST00000364426 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
RNU4-41P-201ENST00000364426 LYPD8Q6UX82 237 aa4.41□□□□□ -1.7
RNU4-41P-201ENST00000364426 HPS1Q92902 700 aa4.41□□□□□ -1.7
RNU4-41P-201ENST00000364426 UNC93B1Q9H1C4 597 aa4.41□□□□□ -1.7
RNU4-41P-201ENST00000364426 ZBTB3Q9H5J0 574 aa4.41□□□□□ -1.7
RNU4-41P-201ENST00000364426 CFAP99D6REC4 459 aa4.4□□□□□ -1.71
RNU4-41P-201ENST00000364426 HRCP23327 699 aa4.4□□□□□ -1.71
RNU4-41P-201ENST00000364426 RIC3Q7Z5B4 369 aa4.4□□□□□ -1.71
RNU4-41P-201ENST00000364426 EHBP1Q8NDI1 1231 aa4.4□□□□□ -1.71
RNU4-41P-201ENST00000364426 ATP13A2Q9NQ11 1180 aa4.4□□□□□ -1.71
RNU4-41P-201ENST00000364426 GMPR2Q9P2T1 348 aaKnown RBP4.4□□□□□ -1.71
RNU4-41P-201ENST00000364426 PCDHB15Q9Y5E8 787 aa4.4□□□□□ -1.71
RNU4-41P-201ENST00000364426 ALDH1A1P00352 501 aa4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 F12P00748 615 aaPredicted RBP4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 VARSP26640 1264 aaKnown RBP4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 MYSM1Q5VVJ2 828 aa4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 ZNF511Q8NB15 262 aa4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 TRIM47Q96LD4 638 aa4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 SLC24A3Q9HC58 644 aa4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 SENP2Q9HC62 589 aa4.39□□□□□ -1.71
RNU4-41P-201ENST00000364426 C11orf95C9JLR9 678 aaPredicted RBP4.38□□□□□ -1.71
RNU4-41P-201ENST00000364426 LILRB3O75022 631 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms