RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 RFX1P22670 979 aa6.47□□□□□ -1.37
RNVU1-3-201ENST00000364313 MTMR2Q13614 643 aa6.47□□□□□ -1.37
RNVU1-3-201ENST00000364313 B4GALNT3Q6L9W6 998 aa6.47□□□□□ -1.37
RNVU1-3-201ENST00000364313 TFIP11Q9UBB9 837 aaKnown RBP6.47□□□□□ -1.37
RNVU1-3-201ENST00000364313 PNMA3Q9UL41 463 aa6.47□□□□□ -1.37
RNVU1-3-201ENST00000364313 MAFBQ9Y5Q3 323 aaPredicted RBP6.47□□□□□ -1.37
RNVU1-3-201ENST00000364313 PTPREP23469 700 aa6.46□□□□□ -1.38
RNVU1-3-201ENST00000364313 LMOD1P29536 600 aaPredicted RBP6.46□□□□□ -1.38
RNVU1-3-201ENST00000364313 VAC14Q08AM6 782 aa6.46□□□□□ -1.38
RNVU1-3-201ENST00000364313 PRR7Q8TB68 274 aa6.46□□□□□ -1.38
RNVU1-3-201ENST00000364313 IVNS1ABPQ9Y6Y0 642 aa6.46□□□□□ -1.38
RNVU1-3-201ENST00000364313 RIMBP2O15034 1052 aa6.45□□□□□ -1.38
RNVU1-3-201ENST00000364313 RDH13Q8NBN7 331 aa6.45□□□□□ -1.38
RNVU1-3-201ENST00000364313 ZNF428Q96B54 188 aa6.45□□□□□ -1.38
RNVU1-3-201ENST00000364313 SLC10A3P09131 477 aa6.44□□□□□ -1.38
RNVU1-3-201ENST00000364313 ERCC3P19447 782 aa6.44□□□□□ -1.38
RNVU1-3-201ENST00000364313 ARSIQ5FYB1 569 aa6.44□□□□□ -1.38
RNVU1-3-201ENST00000364313 SLF2Q8IX21 1173 aa6.44□□□□□ -1.38
RNVU1-3-201ENST00000364313 NFATC2IPQ8NCF5 419 aa6.44□□□□□ -1.38
RNVU1-3-201ENST00000364313 ATP9BO43861 1147 aa6.43□□□□□ -1.38
RNVU1-3-201ENST00000364313 GRIPAP1Q4V328 841 aa6.43□□□□□ -1.38
RNVU1-3-201ENST00000364313 DESI1Q6ICB0 168 aa6.43□□□□□ -1.38
RNVU1-3-201ENST00000364313 TXNDC2Q86VQ3 553 aa6.43□□□□□ -1.38
RNVU1-3-201ENST00000364313 PNMA1Q8ND90 353 aa6.43□□□□□ -1.38
RNVU1-3-201ENST00000364313 LRRN4Q8WUT4 740 aa6.43□□□□□ -1.38
RNVU1-3-201ENST00000364313 LHX6Q9UPM6 363 aa6.43□□□□□ -1.38
RNVU1-3-201ENST00000364313 SHROOM4Q9ULL8 1493 aa6.42□□□□□ -1.38
RNVU1-3-201ENST00000364313 LOC105371045A0A1W2PR82 267 aa6.42□□□□□ -1.38
RNVU1-3-201ENST00000364313 RBM47A0AV96 593 aaKnown RBP6.42□□□□□ -1.38
RNVU1-3-201ENST00000364313 CFAP99D6REC4 459 aa6.42□□□□□ -1.38
RNVU1-3-201ENST00000364313 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
RNVU1-3-201ENST00000364313 SEMA3FQ13275 785 aa6.42□□□□□ -1.38
RNVU1-3-201ENST00000364313 KANK4Q5T7N3 995 aaPredicted RBP6.42□□□□□ -1.38
RNVU1-3-201ENST00000364313 KHSRPQ92945 711 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNVU1-3-201ENST00000364313 IGSF5Q9NSI5 407 aa6.41□□□□□ -1.38
RNVU1-3-201ENST00000364313 CARNS1A5YM72 827 aa6.4□□□□□ -1.38
RNVU1-3-201ENST00000364313 IGSF3O75054 1194 aa6.4□□□□□ -1.38
RNVU1-3-201ENST00000364313 TBC1D9Q6ZT07 1266 aa6.4□□□□□ -1.38
RNVU1-3-201ENST00000364313 EPS8L1Q8TE68 723 aa6.4□□□□□ -1.38
RNVU1-3-201ENST00000364313 SLC4A5Q9BY07 1137 aa6.4□□□□□ -1.38
RNVU1-3-201ENST00000364313 POTEIP0CG38 1075 aa6.39□□□□□ -1.39
RNVU1-3-201ENST00000364313 NR1H3Q13133 447 aa6.39□□□□□ -1.39
RNVU1-3-201ENST00000364313 PLEKHM2Q8IWE5 1019 aa6.39□□□□□ -1.39
RNVU1-3-201ENST00000364313 CCER1Q8TC90 406 aaPredicted RBP6.39□□□□□ -1.39
RNVU1-3-201ENST00000364313 ATP6V1AP38606 617 aa6.38□□□□□ -1.39
RNVU1-3-201ENST00000364313 GUCA2AQ02747 115 aa6.38□□□□□ -1.39
RNVU1-3-201ENST00000364313 FAM196BA6NMK8 535 aa6.37□□□□□ -1.39
RNVU1-3-201ENST00000364313 SMAPO00193 183 aa6.37□□□□□ -1.39
RNVU1-3-201ENST00000364313 NR6A1Q15406 480 aa6.37□□□□□ -1.39
RNVU1-3-201ENST00000364313 PHLDB3Q6NSJ2 640 aa6.37□□□□□ -1.39
RNVU1-3-201ENST00000364313 RETREG3Q86VR2 466 aa6.37□□□□□ -1.39
RNVU1-3-201ENST00000364313 HLA-CQ95604 372 aa6.37□□□□□ -1.39
RNVU1-3-201ENST00000364313 ZC3H4Q9UPT8 1303 aaKnown RBP6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 C6orf229H3BNL8 230 aa6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 SSFA2P28290 1259 aa6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 ARID4AP29374 1257 aaPredicted RBP6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 SWT1Q5T5J6 900 aaKnown RBP6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 ZBED2Q9BTP6 218 aa6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 KIAA1468Q9P260 1216 aa6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 RABGEF1Q9UJ41 708 aa6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 ZMIZ1Q9ULJ6 1067 aa6.36□□□□□ -1.39
RNVU1-3-201ENST00000364313 LZTS3O60299 673 aaPredicted RBP6.35□□□□□ -1.39
RNVU1-3-201ENST00000364313 SLC4A3P48751 1232 aa6.35□□□□□ -1.39
RNVU1-3-201ENST00000364313 FUT2Q10981 343 aa6.35□□□□□ -1.39
RNVU1-3-201ENST00000364313 PROX2Q3B8N5 592 aa6.35□□□□□ -1.39
RNVU1-3-201ENST00000364313 TMEM164Q5U3C3 297 aa6.35□□□□□ -1.39
RNVU1-3-201ENST00000364313 LYPD8Q6UX82 237 aa6.35□□□□□ -1.39
RNVU1-3-201ENST00000364313 DNAJC14Q6Y2X3 702 aaPredicted RBP6.35□□□□□ -1.39
RNVU1-3-201ENST00000364313 ZBBXA8MT70 800 aa6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 PER1O15534 1290 aaPredicted RBP6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 HDGFP51858 240 aaKnown RBP6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 MCCD1P59942 119 aaPredicted RBP6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 CDCA8Q53HL2 280 aa6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 ZNF592Q92610 1267 aa6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 CLP1Q92989 425 aaKnown RBP6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 SALL2Q9Y467 1007 aaPredicted RBP6.34□□□□□ -1.39
RNVU1-3-201ENST00000364313 UNCXA6NJT0 531 aa6.33□□□□□ -1.4
RNVU1-3-201ENST00000364313 HOXB1P14653 301 aaPredicted RBP6.33□□□□□ -1.4
RNVU1-3-201ENST00000364313 FAM69CQ0P6D2 419 aa6.33□□□□□ -1.4
RNVU1-3-201ENST00000364313 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
RNVU1-3-201ENST00000364313 SIRT1Q96EB6 747 aa6.33□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L3A6NCW0 530 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L4A6NCW7 530 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 FBXO45P0C2W1 286 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 FAM98CQ17RN3 349 aaKnown RBP6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 Q3C1V9 767 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 MORN1Q5T089 497 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L2Q6R6M4 530 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L1Q7RTZ2 530 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 TSC1Q92574 1164 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 KCNH8Q96L42 1107 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 CDCA7Q9BWT1 371 aaPredicted RBP6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 CHIC2Q9UKJ5 165 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 NOVA2Q9UNW9 492 aaKnown RBP6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 GPSM3Q9Y4H4 160 aa6.32□□□□□ -1.4
RNVU1-3-201ENST00000364313 LAPTM4BQ86VI4 370 aa6.31□□□□□ -1.4
RNVU1-3-201ENST00000364313 STK32AQ8WU08 396 aa6.31□□□□□ -1.4
RNVU1-3-201ENST00000364313 FKBPLQ9UIM3 349 aa6.31□□□□□ -1.4
RNVU1-3-201ENST00000364313 USP17L5A8MUK1 530 aa6.3□□□□□ -1.4
RNVU1-3-201ENST00000364313 ATP5J2-PTCD1G3V325 749 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms