RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SENP2Q9HC62 589 aa7.23□□□□□ -1.25
RNU6-238P-201ENST00000363313 DDX11L8A8MPP1 907 aa7.22□□□□□ -1.25
RNU6-238P-201ENST00000363313 MMP16P51512 607 aa7.22□□□□□ -1.25
RNU6-238P-201ENST00000363313 REPIN1Q9BWE0 567 aaKnown RBP7.22□□□□□ -1.25
RNU6-238P-201ENST00000363313 RTN4Q9NQC3 1192 aaKnown RBP7.22□□□□□ -1.25
RNU6-238P-201ENST00000363313 DACH1Q9UI36 760 aa7.22□□□□□ -1.25
RNU6-238P-201ENST00000363313 KIFC2Q96AC6 838 aa7.2□□□□□ -1.26
RNU6-238P-201ENST00000363313 SMPD1P17405 629 aa7.19□□□□□ -1.26
RNU6-238P-201ENST00000363313 ATP13A2Q9NQ11 1180 aa7.19□□□□□ -1.26
RNU6-238P-201ENST00000363313 GPR37O15354 613 aa7.18□□□□□ -1.26
RNU6-238P-201ENST00000363313 TRIM32Q13049 653 aa7.18□□□□□ -1.26
RNU6-238P-201ENST00000363313 TRIM47Q96LD4 638 aa7.18□□□□□ -1.26
RNU6-238P-201ENST00000363313 TERTO14746 1132 aaKnown RBP7.17□□□□□ -1.26
RNU6-238P-201ENST00000363313 RBM26Q5T8P6 1007 aaKnown RBP7.17□□□□□ -1.26
RNU6-238P-201ENST00000363313 FECHP22830 423 aa7.16□□□□□ -1.26
RNU6-238P-201ENST00000363313 WNT7BP56706 349 aa7.16□□□□□ -1.26
RNU6-238P-201ENST00000363313 USP46P62068 366 aa7.16□□□□□ -1.26
RNU6-238P-201ENST00000363313 DXOO77932 396 aaKnown RBP7.15□□□□□ -1.26
RNU6-238P-201ENST00000363313 RNF19BQ6ZMZ0 732 aa7.15□□□□□ -1.26
RNU6-238P-201ENST00000363313 MRGPRX2Q96LB1 330 aa7.15□□□□□ -1.26
RNU6-238P-201ENST00000363313 USB1Q9BQ65 265 aaKnown RBP7.15□□□□□ -1.26
RNU6-238P-201ENST00000363313 PRDM9Q9NQV7 894 aa7.15□□□□□ -1.26
RNU6-238P-201ENST00000363313 FAM181BA6NEQ2 426 aa7.14□□□□□ -1.27
RNU6-238P-201ENST00000363313 NPAS3Q8IXF0 933 aa7.14□□□□□ -1.27
RNU6-238P-201ENST00000363313 CD46P15529 392 aa7.13□□□□□ -1.27
RNU6-238P-201ENST00000363313 KDM4AO75164 1064 aa7.12□□□□□ -1.27
RNU6-238P-201ENST00000363313 SLC16A10Q8TF71 515 aa7.12□□□□□ -1.27
RNU6-238P-201ENST00000363313 PHOX2BQ99453 314 aa7.12□□□□□ -1.27
RNU6-238P-201ENST00000363313 J3QL48 77 aa7.11□□□□□ -1.27
RNU6-238P-201ENST00000363313 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
RNU6-238P-201ENST00000363313 RC3H1Q5TC82 1133 aaKnown RBP7.11□□□□□ -1.27
RNU6-238P-201ENST00000363313 GPIHBP1Q8IV16 184 aa7.08□□□□□ -1.28
RNU6-238P-201ENST00000363313 HPS1Q92902 700 aa7.08□□□□□ -1.28
RNU6-238P-201ENST00000363313 NLRP7Q8WX94 980 aa7.07□□□□□ -1.28
RNU6-238P-201ENST00000363313 NXF1Q9UBU9 619 aaKnown RBP7.07□□□□□ -1.28
RNU6-238P-201ENST00000363313 SKOR1P84550 965 aa7.06□□□□□ -1.28
RNU6-238P-201ENST00000363313 MAP2K5Q13163 448 aa7.06□□□□□ -1.28
RNU6-238P-201ENST00000363313 IRF7Q92985 503 aa7.06□□□□□ -1.28
RNU6-238P-201ENST00000363313 SIAH2O43255 324 aa7.05□□□□□ -1.28
RNU6-238P-201ENST00000363313 JUNDP17535 347 aa7.05□□□□□ -1.28
RNU6-238P-201ENST00000363313 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
RNU6-238P-201ENST00000363313 CCDC24Q8N4L8 307 aa7.05□□□□□ -1.28
RNU6-238P-201ENST00000363313 HOXA2O43364 376 aa7.04□□□□□ -1.28
RNU6-238P-201ENST00000363313 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
RNU6-238P-201ENST00000363313 IRF6O14896 467 aa7.03□□□□□ -1.28
RNU6-238P-201ENST00000363313 ALDH1A1P00352 501 aa7.03□□□□□ -1.28
RNU6-238P-201ENST00000363313 MPNDQ8N594 471 aa7.03□□□□□ -1.28
RNU6-238P-201ENST00000363313 RETREG3Q86VR2 466 aa7.02□□□□□ -1.29
RNU6-238P-201ENST00000363313 CAPN5O15484 640 aaPredicted RBP7.01□□□□□ -1.29
RNU6-238P-201ENST00000363313 ZSCAN1Q8NBB4 408 aa7.01□□□□□ -1.29
RNU6-238P-201ENST00000363313 WASF2Q9Y6W5 498 aa7.01□□□□□ -1.29
RNU6-238P-201ENST00000363313 H3BM21 787 aa7□□□□□ -1.29
RNU6-238P-201ENST00000363313 TULP1O00294 542 aaPredicted RBP7□□□□□ -1.29
RNU6-238P-201ENST00000363313 CLCN1P35523 988 aa7□□□□□ -1.29
RNU6-238P-201ENST00000363313 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
RNU6-238P-201ENST00000363313 NUDT12Q9BQG2 462 aa7□□□□□ -1.29
RNU6-238P-201ENST00000363313 PLEKHG3A1L390 1219 aa6.99□□□□□ -1.29
RNU6-238P-201ENST00000363313 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
RNU6-238P-201ENST00000363313 TRIM46Q7Z4K8 759 aa6.98□□□□□ -1.29
RNU6-238P-201ENST00000363313 GPCPD1Q9NPB8 672 aa6.98□□□□□ -1.29
RNU6-238P-201ENST00000363313 GMPRP36959 345 aa6.97□□□□□ -1.29
RNU6-238P-201ENST00000363313 MDM2Q00987 491 aaPredicted RBP6.97□□□□□ -1.29
RNU6-238P-201ENST00000363313 PTCRAQ6ISU1 281 aaPredicted RBP6.97□□□□□ -1.29
RNU6-238P-201ENST00000363313 NUTM1Q86Y26 1132 aa6.97□□□□□ -1.29
RNU6-238P-201ENST00000363313 EVA1BQ9NVM1 165 aa6.97□□□□□ -1.29
RNU6-238P-201ENST00000363313 CCNYL3P0C7X3 344 aa6.96□□□□□ -1.3
RNU6-238P-201ENST00000363313 VARSP26640 1264 aaKnown RBP6.96□□□□□ -1.3
RNU6-238P-201ENST00000363313 SH3BP2P78314 561 aa6.96□□□□□ -1.3
RNU6-238P-201ENST00000363313 PTPRNQ16849 979 aa6.96□□□□□ -1.3
RNU6-238P-201ENST00000363313 DESI1Q6ICB0 168 aa6.96□□□□□ -1.3
RNU6-238P-201ENST00000363313 FAM217BQ9NTX9 383 aaPredicted RBP6.96□□□□□ -1.3
RNU6-238P-201ENST00000363313 SPDYE5A6NIY4 337 aa6.95□□□□□ -1.3
RNU6-238P-201ENST00000363313 MS4A1P11836 297 aa6.95□□□□□ -1.3
RNU6-238P-201ENST00000363313 HLA-CQ95604 372 aa6.95□□□□□ -1.3
RNU6-238P-201ENST00000363313 FDX1P10109 184 aa6.94□□□□□ -1.3
RNU6-238P-201ENST00000363313 PLCB2Q00722 1185 aa6.94□□□□□ -1.3
RNU6-238P-201ENST00000363313 SCARF1Q14162 830 aa6.94□□□□□ -1.3
RNU6-238P-201ENST00000363313 VSIG8P0DPA2 414 aa6.93□□□□□ -1.3
RNU6-238P-201ENST00000363313 BMP1P13497 986 aa6.92□□□□□ -1.3
RNU6-238P-201ENST00000363313 GJA5P36382 358 aa6.92□□□□□ -1.3
RNU6-238P-201ENST00000363313 KCNH2Q12809 1159 aa6.92□□□□□ -1.3
RNU6-238P-201ENST00000363313 SYMPKQ92797 1274 aaKnown RBP6.92□□□□□ -1.3
RNU6-238P-201ENST00000363313 ZFP42Q96MM3 310 aa6.92□□□□□ -1.3
RNU6-238P-201ENST00000363313 UNC93B1Q9H1C4 597 aa6.92□□□□□ -1.3
RNU6-238P-201ENST00000363313 GUCA2AQ02747 115 aa6.91□□□□□ -1.3
RNU6-238P-201ENST00000363313 MRPL14Q6P1L8 145 aaKnown RBP6.91□□□□□ -1.3
RNU6-238P-201ENST00000363313 KRI1Q8N9T8 703 aaKnown RBP6.91□□□□□ -1.3
RNU6-238P-201ENST00000363313 C6orf229H3BNL8 230 aa6.9□□□□□ -1.3
RNU6-238P-201ENST00000363313 ZNF511Q8NB15 262 aa6.9□□□□□ -1.3
RNU6-238P-201ENST00000363313 CCDC102AQ96A19 550 aa6.9□□□□□ -1.3
RNU6-238P-201ENST00000363313 PCDHGC3Q9UN70 934 aa6.9□□□□□ -1.3
RNU6-238P-201ENST00000363313 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
RNU6-238P-201ENST00000363313 ADH1CP00326 375 aa6.89□□□□□ -1.31
RNU6-238P-201ENST00000363313 BAP1Q92560 729 aa6.89□□□□□ -1.31
RNU6-238P-201ENST00000363313 CDK15Q96Q40 435 aa6.89□□□□□ -1.31
RNU6-238P-201ENST00000363313 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
RNU6-238P-201ENST00000363313 ERBB4Q15303 1308 aa6.89□□□□□ -1.31
RNU6-238P-201ENST00000363313 NNTQ13423 1086 aa6.88□□□□□ -1.31
RNU6-238P-201ENST00000363313 DIXDC1Q155Q3 683 aa6.88□□□□□ -1.31
RNU6-238P-201ENST00000363313 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms