RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 CD2BP2O95400 341 aaKnown RBP2.66□□□□□ -1.98
RNU4-58P-201ENST00000363192 SNRPBP14678 240 aaKnown RBP2.66□□□□□ -1.98
RNU4-58P-201ENST00000363192 RSPH4AQ5TD94 716 aa2.66□□□□□ -1.98
RNU4-58P-201ENST00000363192 CYP4X1Q8N118 509 aa2.66□□□□□ -1.98
RNU4-58P-201ENST00000363192 C11orf95C9JLR9 678 aaPredicted RBP2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 J3QL48 77 aa2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 DXOO77932 396 aaKnown RBP2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 CD46P15529 392 aa2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 SKOR1P84550 965 aa2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 TRIM32Q13049 653 aa2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 SULF1Q8IWU6 871 aa2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 SNIP1Q8TAD8 396 aaKnown RBP2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 MRGPRX2Q96LB1 330 aa2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 ATP13A2Q9NQ11 1180 aa2.65□□□□□ -1.99
RNU4-58P-201ENST00000363192 LORP23490 312 aaPredicted RBP2.64□□□□□ -1.99
RNU4-58P-201ENST00000363192 HPS1Q92902 700 aa2.64□□□□□ -1.99
RNU4-58P-201ENST00000363192 HLA-CQ95604 372 aa2.64□□□□□ -1.99
RNU4-58P-201ENST00000363192 TRIM47Q96LD4 638 aa2.64□□□□□ -1.99
RNU4-58P-201ENST00000363192 TTC24A2A3L6 582 aaPredicted RBP2.63□□□□□ -1.99
RNU4-58P-201ENST00000363192 TERTO14746 1132 aaKnown RBP2.63□□□□□ -1.99
RNU4-58P-201ENST00000363192 Q3C1V9 767 aa2.63□□□□□ -1.99
RNU4-58P-201ENST00000363192 SMYD5Q6GMV2 418 aa2.63□□□□□ -1.99
RNU4-58P-201ENST00000363192 USB1Q9BQ65 265 aaKnown RBP2.63□□□□□ -1.99
RNU4-58P-201ENST00000363192 STK17AQ9UEE5 414 aa2.63□□□□□ -1.99
RNU4-58P-201ENST00000363192 ZBTB24O43167 697 aaPredicted RBP2.62□□□□□ -1.99
RNU4-58P-201ENST00000363192 SIAH2O43255 324 aa2.62□□□□□ -1.99
RNU4-58P-201ENST00000363192 HOXA2O43364 376 aa2.62□□□□□ -1.99
RNU4-58P-201ENST00000363192 KDM4AO75164 1064 aa2.62□□□□□ -1.99
RNU4-58P-201ENST00000363192 WNT7BP56706 349 aa2.62□□□□□ -1.99
RNU4-58P-201ENST00000363192 RC3H1Q5TC82 1133 aaKnown RBP2.62□□□□□ -1.99
RNU4-58P-201ENST00000363192 GPIHBP1Q8IV16 184 aa2.62□□□□□ -1.99
RNU4-58P-201ENST00000363192 IRF6O14896 467 aa2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 USP46P62068 366 aa2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 GUCA2AQ02747 115 aa2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 MAP2K5Q13163 448 aa2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 GRIPAP1Q4V328 841 aa2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 PTCRAQ6ISU1 281 aaPredicted RBP2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 TRIM46Q7Z4K8 759 aa2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 REPIN1Q9BWE0 567 aaKnown RBP2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 SENP2Q9HC62 589 aa2.61□□□□□ -1.99
RNU4-58P-201ENST00000363192 JUNDP17535 347 aa2.6□□□□□ -1.99
RNU4-58P-201ENST00000363192 MDM2Q00987 491 aaPredicted RBP2.6□□□□□ -1.99
RNU4-58P-201ENST00000363192 INSM1Q01101 510 aaPredicted RBP2.6□□□□□ -1.99
RNU4-58P-201ENST00000363192 SYMPKQ92797 1274 aaKnown RBP2.6□□□□□ -1.99
RNU4-58P-201ENST00000363192 KIFC2Q96AC6 838 aa2.6□□□□□ -1.99
RNU4-58P-201ENST00000363192 FAM217BQ9NTX9 383 aaPredicted RBP2.6□□□□□ -1.99
RNU4-58P-201ENST00000363192 PCDHGC3Q9UN70 934 aa2.6□□□□□ -1.99
RNU4-58P-201ENST00000363192 ALDH1A1P00352 501 aa2.59□□□□□ -1.99
RNU4-58P-201ENST00000363192 BMP1P13497 986 aa2.59□□□□□ -1.99
RNU4-58P-201ENST00000363192 PLCB2Q00722 1185 aa2.59□□□□□ -1.99
RNU4-58P-201ENST00000363192 CCDC24Q8N4L8 307 aa2.59□□□□□ -1.99
RNU4-58P-201ENST00000363192 CCDC102AQ96A19 550 aa2.59□□□□□ -1.99
RNU4-58P-201ENST00000363192 NXF1Q9UBU9 619 aaKnown RBP2.59□□□□□ -1.99
RNU4-58P-201ENST00000363192 KDM2AQ9Y2K7 1162 aa2.59□□□□□ -1.99
RNU4-58P-201ENST00000363192 H3BM21 787 aa2.58□□□□□ -2
RNU4-58P-201ENST00000363192 GMPRP36959 345 aa2.58□□□□□ -2
RNU4-58P-201ENST00000363192 SH3BP2P78314 561 aa2.58□□□□□ -2
RNU4-58P-201ENST00000363192 RETREG3Q86VR2 466 aa2.58□□□□□ -2
RNU4-58P-201ENST00000363192 NPAS3Q8IXF0 933 aa2.58□□□□□ -2
RNU4-58P-201ENST00000363192 NUDT12Q9BQG2 462 aa2.58□□□□□ -2
RNU4-58P-201ENST00000363192 ERBB4Q15303 1308 aa2.58□□□□□ -2
RNU4-58P-201ENST00000363192 MINK1Q8N4C8 1332 aaPredicted RBP2.58□□□□□ -2
RNU4-58P-201ENST00000363192 LOC100996750A0A140TA64 210 aa2.57□□□□□ -2
RNU4-58P-201ENST00000363192 CAPN5O15484 640 aaPredicted RBP2.57□□□□□ -2
RNU4-58P-201ENST00000363192 CCNYL3P0C7X3 344 aa2.57□□□□□ -2
RNU4-58P-201ENST00000363192 MPNDQ8N594 471 aa2.57□□□□□ -2
RNU4-58P-201ENST00000363192 EHBP1Q8NDI1 1231 aa2.57□□□□□ -2
RNU4-58P-201ENST00000363192 KLF16Q9BXK1 252 aaPredicted RBP2.57□□□□□ -2
RNU4-58P-201ENST00000363192 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
RNU4-58P-201ENST00000363192 GPCPD1Q9NPB8 672 aa2.57□□□□□ -2
RNU4-58P-201ENST00000363192 VSIG8P0DPA2 414 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 FDX1P10109 184 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 CLCN1P35523 988 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 VEGFBP49765 207 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 PTPRNQ16849 979 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 ZSCAN1Q8NBB4 408 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 SPIRE2Q8WWL2 714 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 BAP1Q92560 729 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 ZFP42Q96MM3 310 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 UNC93B1Q9H1C4 597 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 EVA1BQ9NVM1 165 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 TLL2Q9Y6L7 1015 aa2.56□□□□□ -2
RNU4-58P-201ENST00000363192 MS4A1P11836 297 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 TIMP2P16035 220 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 NDUFV2P19404 249 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 GSK3AP49840 483 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 LINC01559Q495D7 138 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 ZNF511Q8NB15 262 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 SLC16A10Q8TF71 515 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 IRF7Q92985 503 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 WASF2Q9Y6W5 498 aa2.55□□□□□ -2
RNU4-58P-201ENST00000363192 MOXD2PA6NHM9 499 aa2.54□□□□□ -2
RNU4-58P-201ENST00000363192 C6orf229H3BNL8 230 aa2.54□□□□□ -2
RNU4-58P-201ENST00000363192 F12P00748 615 aaPredicted RBP2.54□□□□□ -2
RNU4-58P-201ENST00000363192 VARSP26640 1264 aaKnown RBP2.54□□□□□ -2
RNU4-58P-201ENST00000363192 SSTR3P32745 418 aaPredicted RBP2.54□□□□□ -2
RNU4-58P-201ENST00000363192 KCNH2Q12809 1159 aa2.54□□□□□ -2
RNU4-58P-201ENST00000363192 NNTQ13423 1086 aa2.54□□□□□ -2
RNU4-58P-201ENST00000363192 DESI1Q6ICB0 168 aa2.54□□□□□ -2
RNU4-58P-201ENST00000363192 MRPL14Q6P1L8 145 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms