RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ZNF521Q96K83 1311 aa13.91□□□□□ -0.18
SMC3-201ENST00000361804 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
SMC3-201ENST00000361804 BCAR3O75815 825 aa13.89□□□□□ -0.19
SMC3-201ENST00000361804 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
SMC3-201ENST00000361804 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
SMC3-201ENST00000361804 INSRP06213 1382 aa13.89□□□□□ -0.19
SMC3-201ENST00000361804 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
SMC3-201ENST00000361804 APAF1O14727 1248 aa13.88□□□□□ -0.19
SMC3-201ENST00000361804 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
SMC3-201ENST00000361804 SPATA31D1Q6ZQQ2 1576 aa13.87□□□□□ -0.19
SMC3-201ENST00000361804 MS4A1P11836 297 aa13.87□□□□□ -0.19
SMC3-201ENST00000361804 KDM2BQ8NHM5 1336 aa13.86□□□□□ -0.19
SMC3-201ENST00000361804 NPC1L1Q9UHC9 1359 aa13.86□□□□□ -0.19
SMC3-201ENST00000361804 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
SMC3-201ENST00000361804 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
SMC3-201ENST00000361804 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
SMC3-201ENST00000361804 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
SMC3-201ENST00000361804 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
SMC3-201ENST00000361804 AGLP35573 1532 aa13.85□□□□□ -0.19
SMC3-201ENST00000361804 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
SMC3-201ENST00000361804 KANK1Q14678 1352 aa13.83□□□□□ -0.19
SMC3-201ENST00000361804 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
SMC3-201ENST00000361804 ZFYVE9O95405 1425 aa13.83□□□□□ -0.2
SMC3-201ENST00000361804 RRP7AQ9Y3A4 280 aaKnown RBP13.83□□□□□ -0.2
SMC3-201ENST00000361804 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
SMC3-201ENST00000361804 ANO8Q9HCE9 1232 aaPredicted RBP13.82□□□□□ -0.2
SMC3-201ENST00000361804 SLFN5Q08AF3 891 aa13.81□□□□□ -0.2
SMC3-201ENST00000361804 TMEM132EQ6IEE7 984 aa13.81□□□□□ -0.2
SMC3-201ENST00000361804 COL3A1P02461 1466 aaPredicted RBP13.81□□□□□ -0.2
SMC3-201ENST00000361804 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
SMC3-201ENST00000361804 IGHDP01880 384 aa13.8□□□□□ -0.2
SMC3-201ENST00000361804 NFKBIBQ15653 356 aa13.8□□□□□ -0.2
SMC3-201ENST00000361804 TNNQ9UQP3 1299 aa13.8□□□□□ -0.2
SMC3-201ENST00000361804 IDI1Q13907 227 aa13.8□□□□□ -0.2
SMC3-201ENST00000361804 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
SMC3-201ENST00000361804 ADGRB2O60241 1585 aa13.8□□□□□ -0.2
SMC3-201ENST00000361804 GGT6Q6P531 493 aa13.79□□□□□ -0.2
SMC3-201ENST00000361804 UBR1Q8IWV7 1749 aa13.79□□□□□ -0.2
SMC3-201ENST00000361804 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
SMC3-201ENST00000361804 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
SMC3-201ENST00000361804 KIF20BQ96Q89 1820 aa13.79□□□□□ -0.2
SMC3-201ENST00000361804 CYB5RLQ6IPT4 315 aa13.78□□□□□ -0.2
SMC3-201ENST00000361804 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
SMC3-201ENST00000361804 FBXO31Q5XUX0 539 aaPredicted RBP13.78□□□□□ -0.2
SMC3-201ENST00000361804 COG6Q9Y2V7 657 aa13.78□□□□□ -0.2
SMC3-201ENST00000361804 A2ML1A8K2U0 1454 aa13.77□□□□□ -0.2
SMC3-201ENST00000361804 SEC24BO95487 1268 aa13.77□□□□□ -0.2
SMC3-201ENST00000361804 CHGAP10645 457 aaKnown RBP13.77□□□□□ -0.2
SMC3-201ENST00000361804 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.2
SMC3-201ENST00000361804 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.2
SMC3-201ENST00000361804 FRAT1Q92837 279 aaPredicted RBP13.77□□□□□ -0.2
SMC3-201ENST00000361804 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
SMC3-201ENST00000361804 KNDC1Q76NI1 1749 aa13.76□□□□□ -0.21
SMC3-201ENST00000361804 FRAT2O75474 233 aaPredicted RBP13.76□□□□□ -0.21
SMC3-201ENST00000361804 DAXXQ9UER7 740 aaPredicted RBP13.76□□□□□ -0.21
SMC3-201ENST00000361804 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.75□□□□□ -0.21
SMC3-201ENST00000361804 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
SMC3-201ENST00000361804 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
SMC3-201ENST00000361804 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
SMC3-201ENST00000361804 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
SMC3-201ENST00000361804 TRAK1Q9UPV9 953 aa13.73□□□□□ -0.21
SMC3-201ENST00000361804 NRKQ7Z2Y5 1582 aa13.73□□□□□ -0.21
SMC3-201ENST00000361804 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
SMC3-201ENST00000361804 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
SMC3-201ENST00000361804 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.72□□□□□ -0.21
SMC3-201ENST00000361804 MON2Q7Z3U7 1717 aa13.72□□□□□ -0.21
SMC3-201ENST00000361804 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
SMC3-201ENST00000361804 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
SMC3-201ENST00000361804 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.72□□□□□ -0.21
SMC3-201ENST00000361804 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
SMC3-201ENST00000361804 MED14O60244 1454 aa13.71□□□□□ -0.21
SMC3-201ENST00000361804 RLBP1P12271 317 aa13.7□□□□□ -0.22
SMC3-201ENST00000361804 GSE1Q14687 1217 aa13.7□□□□□ -0.22
SMC3-201ENST00000361804 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
SMC3-201ENST00000361804 NKTRP30414 1462 aaKnown RBP13.7□□□□□ -0.22
SMC3-201ENST00000361804 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
SMC3-201ENST00000361804 MAP2P11137 1827 aaKnown RBP13.7□□□□□ -0.22
SMC3-201ENST00000361804 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
SMC3-201ENST00000361804 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
SMC3-201ENST00000361804 USP35Q9P2H5 1018 aa13.7□□□□□ -0.22
SMC3-201ENST00000361804 C3P01024 1663 aa13.7□□□□□ -0.22
SMC3-201ENST00000361804 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
SMC3-201ENST00000361804 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
SMC3-201ENST00000361804 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMC3-201ENST00000361804 USP19O94966 1318 aa13.68□□□□□ -0.22
SMC3-201ENST00000361804 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
SMC3-201ENST00000361804 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
SMC3-201ENST00000361804 YTHDC2Q9H6S0 1430 aaKnown RBP13.68□□□□□ -0.22
SMC3-201ENST00000361804 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
SMC3-201ENST00000361804 E9PSI1 815 aa13.68□□□□□ -0.22
SMC3-201ENST00000361804 POLR3AO14802 1390 aaPredicted RBP13.68□□□□□ -0.22
SMC3-201ENST00000361804 SPRYD3Q8NCJ5 442 aa13.67□□□□□ -0.22
SMC3-201ENST00000361804 DLG5Q8TDM6 1919 aa13.67□□□□□ -0.22
SMC3-201ENST00000361804 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
SMC3-201ENST00000361804 ARXQ96QS3 562 aa13.67□□□□□ -0.22
SMC3-201ENST00000361804 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMC3-201ENST00000361804 FAM69CQ0P6D2 419 aa13.66□□□□□ -0.22
SMC3-201ENST00000361804 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
SMC3-201ENST00000361804 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
SMC3-201ENST00000361804 PCDHB15Q9Y5E8 787 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms