RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 HIRIP3Q9BW71 556 aaPredicted RBP9.12□□□□□ -0.95
SUDS3-201ENST00000360286 FAM135BQ49AJ0 1406 aa9.12□□□□□ -0.95
SUDS3-201ENST00000360286 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
SUDS3-201ENST00000360286 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
SUDS3-201ENST00000360286 IQSEC2Q5JU85 1478 aa9.11□□□□□ -0.95
SUDS3-201ENST00000360286 RALGAPBQ86X10 1494 aa9.11□□□□□ -0.95
SUDS3-201ENST00000360286 NUTM2FA1L443 756 aa9.11□□□□□ -0.95
SUDS3-201ENST00000360286 ATF3P18847 181 aa9.11□□□□□ -0.95
SUDS3-201ENST00000360286 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
SUDS3-201ENST00000360286 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
SUDS3-201ENST00000360286 SLAIN2Q9P270 581 aa9.1□□□□□ -0.95
SUDS3-201ENST00000360286 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
SUDS3-201ENST00000360286 NALCNQ8IZF0 1738 aa9.1□□□□□ -0.95
SUDS3-201ENST00000360286 ARHGEF28Q8N1W1 1705 aaKnown RBP9.1□□□□□ -0.95
SUDS3-201ENST00000360286 CENPJQ9HC77 1338 aaPredicted RBP9.09□□□□□ -0.95
SUDS3-201ENST00000360286 FBXO41Q8TF61 875 aa9.09□□□□□ -0.95
SUDS3-201ENST00000360286 ST20-MTHFSA0A0A6YYL1 179 aa9.08□□□□□ -0.96
SUDS3-201ENST00000360286 WASLO00401 505 aaPredicted RBP9.08□□□□□ -0.96
SUDS3-201ENST00000360286 CDK19Q9BWU1 502 aa9.08□□□□□ -0.96
SUDS3-201ENST00000360286 ORAI2Q96SN7 254 aa9.07□□□□□ -0.96
SUDS3-201ENST00000360286 MST1RQ04912 1400 aa9.06□□□□□ -0.96
SUDS3-201ENST00000360286 ILDR1Q86SU0 546 aaPredicted RBP9.06□□□□□ -0.96
SUDS3-201ENST00000360286 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
SUDS3-201ENST00000360286 DCCP43146 1447 aa9.05□□□□□ -0.96
SUDS3-201ENST00000360286 RGPD8O14715 1765 aaPredicted RBP9.05□□□□□ -0.96
SUDS3-201ENST00000360286 QRICH2Q9H0J4 1663 aa9.05□□□□□ -0.96
SUDS3-201ENST00000360286 C1orf167Q5SNV9 1468 aa9.05□□□□□ -0.96
SUDS3-201ENST00000360286 EIF3AQ14152 1382 aaKnown RBP9.05□□□□□ -0.96
SUDS3-201ENST00000360286 USP47Q96K76 1375 aa9.05□□□□□ -0.96
SUDS3-201ENST00000360286 HSPA5P11021 654 aaKnown RBP9.05□□□□□ -0.96
SUDS3-201ENST00000360286 ESCO1Q5FWF5 840 aa9.05□□□□□ -0.96
SUDS3-201ENST00000360286 BRINP3Q76B58 766 aa9.05□□□□□ -0.96
SUDS3-201ENST00000360286 DDX17Q92841 729 aaKnown RBP9.05□□□□□ -0.96
SUDS3-201ENST00000360286 PRR36Q9H6K5 1346 aa9.05□□□□□ -0.96
SUDS3-201ENST00000360286 SRPK2P78362 688 aaKnown RBP9.04□□□□□ -0.96
SUDS3-201ENST00000360286 PMFBP1Q8TBY8 1022 aa9.04□□□□□ -0.96
SUDS3-201ENST00000360286 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
SUDS3-201ENST00000360286 TESK2Q96S53 571 aa9.04□□□□□ -0.96
SUDS3-201ENST00000360286 CDC42BPGQ6DT37 1551 aa9.03□□□□□ -0.96
SUDS3-201ENST00000360286 FMN2Q9NZ56 1722 aa9.03□□□□□ -0.96
SUDS3-201ENST00000360286 HSPA1LP34931 641 aa9.03□□□□□ -0.96
SUDS3-201ENST00000360286 EIF4G2P78344 907 aaKnown RBP eCLIP9.03□□□□□ -0.96
SUDS3-201ENST00000360286 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
SUDS3-201ENST00000360286 ROBO1Q9Y6N7 1651 aa9.02□□□□□ -0.97
SUDS3-201ENST00000360286 PHF8Q9UPP1 1060 aa9.02□□□□□ -0.97
SUDS3-201ENST00000360286 ADGRB2O60241 1585 aa9.02□□□□□ -0.97
SUDS3-201ENST00000360286 USP32Q8NFA0 1604 aa9.02□□□□□ -0.97
SUDS3-201ENST00000360286 TULP4Q9NRJ4 1543 aa9.01□□□□□ -0.97
SUDS3-201ENST00000360286 FOXO3O43524 673 aa9.01□□□□□ -0.97
SUDS3-201ENST00000360286 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
SUDS3-201ENST00000360286 TMF1P82094 1093 aa9□□□□□ -0.97
SUDS3-201ENST00000360286 XPCQ01831 940 aaPredicted RBP9□□□□□ -0.97
SUDS3-201ENST00000360286 CABP1Q9NZU7 370 aa9□□□□□ -0.97
SUDS3-201ENST00000360286 CCDC61Q9Y6R9 512 aa9□□□□□ -0.97
SUDS3-201ENST00000360286 DISP3Q9P2K9 1392 aa8.99□□□□□ -0.97
SUDS3-201ENST00000360286 SBNO2Q9Y2G9 1366 aa8.99□□□□□ -0.97
SUDS3-201ENST00000360286 ANKARQ7Z5J8 1434 aa8.99□□□□□ -0.97
SUDS3-201ENST00000360286 C11orf95C9JLR9 678 aaPredicted RBP8.99□□□□□ -0.97
SUDS3-201ENST00000360286 PSME1Q06323 249 aa8.99□□□□□ -0.97
SUDS3-201ENST00000360286 KRT28Q7Z3Y7 464 aa8.99□□□□□ -0.97
SUDS3-201ENST00000360286 ATP7BP35670 1465 aa8.98□□□□□ -0.97
SUDS3-201ENST00000360286 PLEKHG3A1L390 1219 aa8.98□□□□□ -0.97
SUDS3-201ENST00000360286 SLC24A1O60721 1099 aa8.98□□□□□ -0.97
SUDS3-201ENST00000360286 NGDNQ8NEJ9 315 aaKnown RBP8.98□□□□□ -0.97
SUDS3-201ENST00000360286 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
SUDS3-201ENST00000360286 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
SUDS3-201ENST00000360286 SLC12A5Q9H2X9 1139 aa8.98□□□□□ -0.97
SUDS3-201ENST00000360286 ACEP12821 1306 aa8.98□□□□□ -0.97
SUDS3-201ENST00000360286 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
SUDS3-201ENST00000360286 PHLPP1O60346 1717 aa8.97□□□□□ -0.97
SUDS3-201ENST00000360286 PUS7Q96PZ0 661 aaKnown RBP8.97□□□□□ -0.97
SUDS3-201ENST00000360286 SOS2Q07890 1332 aaPredicted RBP8.97□□□□□ -0.97
SUDS3-201ENST00000360286 NPHP3Q7Z494 1330 aa8.97□□□□□ -0.97
SUDS3-201ENST00000360286 NHSL1Q5SYE7 1610 aa8.95□□□□□ -0.98
SUDS3-201ENST00000360286 AHDC1Q5TGY3 1603 aaPredicted RBP8.95□□□□□ -0.98
SUDS3-201ENST00000360286 LRRC59Q96AG4 307 aaKnown RBP8.95□□□□□ -0.98
SUDS3-201ENST00000360286 ATAD2Q6PL18 1390 aa8.95□□□□□ -0.98
SUDS3-201ENST00000360286 KIF1AQ12756 1690 aa8.94□□□□□ -0.98
SUDS3-201ENST00000360286 TOPAZ1Q8N9V7 1692 aa8.94□□□□□ -0.98
SUDS3-201ENST00000360286 ITSN1Q15811 1721 aa8.94□□□□□ -0.98
SUDS3-201ENST00000360286 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
SUDS3-201ENST00000360286 PLEKHG5O94827 1062 aa8.94□□□□□ -0.98
SUDS3-201ENST00000360286 CDCA8Q53HL2 280 aa8.94□□□□□ -0.98
SUDS3-201ENST00000360286 LMOD2Q6P5Q4 547 aa8.94□□□□□ -0.98
SUDS3-201ENST00000360286 POLR3AO14802 1390 aaPredicted RBP8.94□□□□□ -0.98
SUDS3-201ENST00000360286 PXDNQ92626 1479 aa8.94□□□□□ -0.98
SUDS3-201ENST00000360286 COL16A1Q07092 1604 aaPredicted RBP8.94□□□□□ -0.98
SUDS3-201ENST00000360286 ZNF692Q9BU19 519 aaPredicted RBP8.93□□□□□ -0.98
SUDS3-201ENST00000360286 SPATA31A3Q5VYP0 1347 aa8.93□□□□□ -0.98
SUDS3-201ENST00000360286 CD163L1Q9NR16 1453 aa8.92□□□□□ -0.98
SUDS3-201ENST00000360286 KIF7Q2M1P5 1343 aa8.92□□□□□ -0.98
SUDS3-201ENST00000360286 NUTM2GQ5VZR2 741 aa8.92□□□□□ -0.98
SUDS3-201ENST00000360286 HDGFL2Q7Z4V5 671 aaPredicted RBP8.92□□□□□ -0.98
SUDS3-201ENST00000360286 CPSF1Q10570 1443 aaKnown RBP8.91□□□□□ -0.98
SUDS3-201ENST00000360286 SBNO1A3KN83 1393 aa8.91□□□□□ -0.98
SUDS3-201ENST00000360286 KTN1Q86UP2 1357 aaKnown RBP8.91□□□□□ -0.98
SUDS3-201ENST00000360286 PNPLA6Q8IY17 1366 aa8.91□□□□□ -0.98
SUDS3-201ENST00000360286 JCADQ9P266 1359 aa8.91□□□□□ -0.98
SUDS3-201ENST00000360286 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
SUDS3-201ENST00000360286 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms