RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 TTC37Q6PGP7 1564 aa9.54□□□□□ -0.88
APP-206ENST00000359726 ABCA6Q8N139 1617 aa9.54□□□□□ -0.88
APP-206ENST00000359726 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
APP-206ENST00000359726 E9PSI1 815 aa9.53□□□□□ -0.88
APP-206ENST00000359726 RLBP1P12271 317 aa9.53□□□□□ -0.88
APP-206ENST00000359726 RBM25P49756 843 aaKnown RBP9.53□□□□□ -0.88
APP-206ENST00000359726 CCDC173Q0VFZ6 552 aa9.53□□□□□ -0.88
APP-206ENST00000359726 KIF2CQ99661 725 aa9.53□□□□□ -0.88
APP-206ENST00000359726 INO80Q9ULG1 1556 aaPredicted RBP9.53□□□□□ -0.88
APP-206ENST00000359726 PDZRN3Q9UPQ7 1066 aa9.53□□□□□ -0.88
APP-206ENST00000359726 HS1BP3Q53T59 392 aa9.53□□□□□ -0.88
APP-206ENST00000359726 UTP14CQ5TAP6 766 aaKnown RBP9.53□□□□□ -0.88
APP-206ENST00000359726 TNPO1Q92973 898 aaKnown RBP9.53□□□□□ -0.88
APP-206ENST00000359726 IFT172Q9UG01 1749 aa9.52□□□□□ -0.88
APP-206ENST00000359726 PANK1Q8TE04 598 aa9.52□□□□□ -0.89
APP-206ENST00000359726 MAP7D2Q96T17 732 aa9.52□□□□□ -0.89
APP-206ENST00000359726 ARXQ96QS3 562 aa9.51□□□□□ -0.89
APP-206ENST00000359726 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
APP-206ENST00000359726 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
APP-206ENST00000359726 ZSCAN20P17040 1043 aaPredicted RBP9.5□□□□□ -0.89
APP-206ENST00000359726 NOL7Q9UMY1 257 aaKnown RBP9.5□□□□□ -0.89
APP-206ENST00000359726 TNNQ9UQP3 1299 aa9.5□□□□□ -0.89
APP-206ENST00000359726 NEURL4Q96JN8 1562 aa9.5□□□□□ -0.89
APP-206ENST00000359726 DMTNQ08495 405 aa9.5□□□□□ -0.89
APP-206ENST00000359726 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
APP-206ENST00000359726 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
APP-206ENST00000359726 NGEFQ8N5V2 710 aa9.5□□□□□ -0.89
APP-206ENST00000359726 PMFBP1Q8TBY8 1022 aa9.5□□□□□ -0.89
APP-206ENST00000359726 RARSP54136 660 aaKnown RBP9.49□□□□□ -0.89
APP-206ENST00000359726 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.49□□□□□ -0.89
APP-206ENST00000359726 REREQ9P2R6 1566 aa9.49□□□□□ -0.89
APP-206ENST00000359726 ZNF445P59923 1031 aa9.48□□□□□ -0.89
APP-206ENST00000359726 PLB1Q6P1J6 1458 aa9.48□□□□□ -0.89
APP-206ENST00000359726 POLR3AO14802 1390 aaPredicted RBP9.48□□□□□ -0.89
APP-206ENST00000359726 APAF1O14727 1248 aa9.48□□□□□ -0.89
APP-206ENST00000359726 SKOR2Q2VWA4 1001 aaPredicted RBP9.48□□□□□ -0.89
APP-206ENST00000359726 WWC1Q8IX03 1113 aa9.48□□□□□ -0.89
APP-206ENST00000359726 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
APP-206ENST00000359726 CFDP1Q9UEE9 299 aaPredicted RBP9.47□□□□□ -0.89
APP-206ENST00000359726 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
APP-206ENST00000359726 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
APP-206ENST00000359726 TMF1P82094 1093 aa9.47□□□□□ -0.89
APP-206ENST00000359726 FBLN2P98095 1184 aa9.47□□□□□ -0.89
APP-206ENST00000359726 CCDC146Q8IYE0 955 aa9.47□□□□□ -0.89
APP-206ENST00000359726 DYNC1I1O14576 645 aa9.46□□□□□ -0.89
APP-206ENST00000359726 TRHP20396 242 aaPredicted RBP9.46□□□□□ -0.89
APP-206ENST00000359726 ERVK-7P63135 1459 aa9.46□□□□□ -0.89
APP-206ENST00000359726 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.89
APP-206ENST00000359726 CYP2E1P05181 493 aaPredicted RBP9.46□□□□□ -0.89
APP-206ENST00000359726 HSP90AB1P08238 724 aaKnown RBP9.46□□□□□ -0.89
APP-206ENST00000359726 WDR43Q15061 677 aaKnown RBP eCLIP9.46□□□□□ -0.89
APP-206ENST00000359726 CYB5RLQ6IPT4 315 aa9.46□□□□□ -0.89
APP-206ENST00000359726 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.9
APP-206ENST00000359726 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
APP-206ENST00000359726 SCAF11Q99590 1463 aaKnown RBP9.46□□□□□ -0.9
APP-206ENST00000359726 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
APP-206ENST00000359726 TRPM2O94759 1503 aa9.45□□□□□ -0.9
APP-206ENST00000359726 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
APP-206ENST00000359726 TRIM44Q96DX7 344 aaPredicted RBP9.45□□□□□ -0.9
APP-206ENST00000359726 DEPDC5O75140 1603 aa9.45□□□□□ -0.9
APP-206ENST00000359726 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
APP-206ENST00000359726 ADGRL1O94910 1474 aa9.44□□□□□ -0.9
APP-206ENST00000359726 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
APP-206ENST00000359726 PTMSP20962 102 aa9.44□□□□□ -0.9
APP-206ENST00000359726 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
APP-206ENST00000359726 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
APP-206ENST00000359726 UQCRHLA0A096LP55 91 aa9.43□□□□□ -0.9
APP-206ENST00000359726 UQCRHP07919 91 aa9.43□□□□□ -0.9
APP-206ENST00000359726 CCDC94Q9BW85 323 aaPredicted RBP9.43□□□□□ -0.9
APP-206ENST00000359726 MED14O60244 1454 aa9.43□□□□□ -0.9
APP-206ENST00000359726 KNDC1Q76NI1 1749 aa9.43□□□□□ -0.9
APP-206ENST00000359726 NOS1P29475 1434 aa9.43□□□□□ -0.9
APP-206ENST00000359726 GTF2F1P35269 517 aaKnown RBP eCLIP9.43□□□□□ -0.9
APP-206ENST00000359726 ARID3CA6NKF2 412 aa9.43□□□□□ -0.9
APP-206ENST00000359726 GTF2E1P29083 439 aaPredicted RBP9.42□□□□□ -0.9
APP-206ENST00000359726 MVPQ14764 893 aaKnown RBP9.42□□□□□ -0.9
APP-206ENST00000359726 ZKSCAN5Q9Y2L8 839 aa9.42□□□□□ -0.9
APP-206ENST00000359726 ZNF518AQ6AHZ1 1483 aa9.42□□□□□ -0.9
APP-206ENST00000359726 IFT140Q96RY7 1462 aa9.42□□□□□ -0.9
APP-206ENST00000359726 MCM5P33992 734 aa9.42□□□□□ -0.9
APP-206ENST00000359726 CCDC27Q2M243 656 aa9.42□□□□□ -0.9
APP-206ENST00000359726 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
APP-206ENST00000359726 R3HCC1Q9Y3T6 440 aaKnown RBP9.42□□□□□ -0.9
APP-206ENST00000359726 HSCBQ8IWL3 235 aa9.41□□□□□ -0.9
APP-206ENST00000359726 RWDD1Q9H446 243 aaPredicted RBP9.41□□□□□ -0.9
APP-206ENST00000359726 MAP3K4Q9Y6R4 1608 aa9.41□□□□□ -0.9
APP-206ENST00000359726 A0A0U1RQG5 324 aaPredicted RBP9.41□□□□□ -0.9
APP-206ENST00000359726 MFAP1P55081 439 aaKnown RBP9.41□□□□□ -0.9
APP-206ENST00000359726 GBP4Q96PP9 640 aa9.41□□□□□ -0.9
APP-206ENST00000359726 FAM13BQ9NYF5 915 aa9.41□□□□□ -0.9
APP-206ENST00000359726 ATP10BO94823 1461 aa9.41□□□□□ -0.9
APP-206ENST00000359726 LMBRD1Q9NUN5 540 aa9.41□□□□□ -0.9
APP-206ENST00000359726 BAG4O95429 457 aaKnown RBP9.4□□□□□ -0.9
APP-206ENST00000359726 SSFA2P28290 1259 aa9.4□□□□□ -0.9
APP-206ENST00000359726 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.9
APP-206ENST00000359726 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
APP-206ENST00000359726 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
APP-206ENST00000359726 ZSCAN23Q3MJ62 389 aa9.4□□□□□ -0.9
APP-206ENST00000359726 SASS6Q6UVJ0 657 aa9.4□□□□□ -0.9
APP-206ENST00000359726 SYCP2Q9BX26 1530 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms