RNA–Protein interactions for RNA: ENST00000358923.10

PDE4D-204, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-204ENST00000358923 UBE2Q2Q8WVN8 375 aa23.9■■□□□ 1.42
PDE4D-204ENST00000358923 NCKAP5LQ9HCH0 1330 aa23.89■■□□□ 1.42
PDE4D-204ENST00000358923 SETBP1Q9Y6X0 1596 aa23.89■■□□□ 1.42
PDE4D-204ENST00000358923 KDM5AP29375 1690 aaKnown RBP23.89■■□□□ 1.42
PDE4D-204ENST00000358923 YTHDC2Q9H6S0 1430 aaKnown RBP23.89■■□□□ 1.41
PDE4D-204ENST00000358923 NUTM2FA1L443 756 aa23.89■■□□□ 1.41
PDE4D-204ENST00000358923 METP08581 1390 aa23.89■■□□□ 1.41
PDE4D-204ENST00000358923 CCDC146Q8IYE0 955 aa23.88■■□□□ 1.41
PDE4D-204ENST00000358923 SPATA31D1Q6ZQQ2 1576 aa23.88■■□□□ 1.41
PDE4D-204ENST00000358923 NSD3Q9BZ95 1437 aa23.87■■□□□ 1.41
PDE4D-204ENST00000358923 EVC2Q86UK5 1308 aa23.87■■□□□ 1.41
PDE4D-204ENST00000358923 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
PDE4D-204ENST00000358923 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
PDE4D-204ENST00000358923 PTPRMP28827 1452 aa23.86■■□□□ 1.41
PDE4D-204ENST00000358923 LRPPRCP42704 1394 aaKnown RBP23.86■■□□□ 1.41
PDE4D-204ENST00000358923 TULP4Q9NRJ4 1543 aa23.85■■□□□ 1.41
PDE4D-204ENST00000358923 FBLN1P23142 703 aa23.85■■□□□ 1.41
PDE4D-204ENST00000358923 CDK19Q9BWU1 502 aa23.84■■□□□ 1.41
PDE4D-204ENST00000358923 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
PDE4D-204ENST00000358923 ZFYVE9O95405 1425 aa23.83■■□□□ 1.41
PDE4D-204ENST00000358923 SBNO2Q9Y2G9 1366 aa23.82■■□□□ 1.4
PDE4D-204ENST00000358923 CABP1Q9NZU7 370 aa23.82■■□□□ 1.4
PDE4D-204ENST00000358923 GGNBP2Q9H3C7 697 aa23.81■■□□□ 1.4
PDE4D-204ENST00000358923 MORC1Q86VD1 984 aa23.81■■□□□ 1.4
PDE4D-204ENST00000358923 MYO3AQ8NEV4 1616 aa23.79■■□□□ 1.4
PDE4D-204ENST00000358923 DNAJC5Q9H3Z4 198 aa23.79■■□□□ 1.4
PDE4D-204ENST00000358923 WDR43Q15061 677 aaKnown RBP eCLIP23.77■■□□□ 1.4
PDE4D-204ENST00000358923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.77■■□□□ 1.4
PDE4D-204ENST00000358923 TMEM2Q9UHN6 1383 aa23.76■■□□□ 1.39
PDE4D-204ENST00000358923 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
PDE4D-204ENST00000358923 A0A1W2PP64 1363 aa23.75■■□□□ 1.39
PDE4D-204ENST00000358923 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
PDE4D-204ENST00000358923 NBR1Q14596 966 aa23.72■■□□□ 1.39
PDE4D-204ENST00000358923 NUDCQ9Y266 331 aa23.72■■□□□ 1.39
PDE4D-204ENST00000358923 MTHFSP49914 203 aa23.71■■□□□ 1.39
PDE4D-204ENST00000358923 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDE4D-204ENST00000358923 NEUROD2Q15784 382 aa23.7■■□□□ 1.38
PDE4D-204ENST00000358923 ZRANB1Q9UGI0 708 aa23.69■■□□□ 1.38
PDE4D-204ENST00000358923 CGNL1Q0VF96 1302 aa23.68■■□□□ 1.38
PDE4D-204ENST00000358923 NRXN3Q9Y4C0 1643 aa23.68■■□□□ 1.38
PDE4D-204ENST00000358923 APAF1O14727 1248 aa23.68■■□□□ 1.38
PDE4D-204ENST00000358923 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.68■■□□□ 1.38
PDE4D-204ENST00000358923 RRP7AQ9Y3A4 280 aaKnown RBP23.68■■□□□ 1.38
PDE4D-204ENST00000358923 ROBO2Q9HCK4 1378 aa23.67■■□□□ 1.38
PDE4D-204ENST00000358923 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
PDE4D-204ENST00000358923 FYB1O15117 783 aa23.66■■□□□ 1.38
PDE4D-204ENST00000358923 PPM1GO15355 546 aaPredicted RBP23.65■■□□□ 1.38
PDE4D-204ENST00000358923 C3P01024 1663 aa23.64■■□□□ 1.38
PDE4D-204ENST00000358923 UBR1Q8IWV7 1749 aa23.64■■□□□ 1.38
PDE4D-204ENST00000358923 DMRT2Q9Y5R5 561 aa23.64■■□□□ 1.37
PDE4D-204ENST00000358923 EID1Q9Y6B2 187 aa23.64■■□□□ 1.37
PDE4D-204ENST00000358923 WASLO00401 505 aaPredicted RBP23.63■■□□□ 1.37
PDE4D-204ENST00000358923 HDGFP51858 240 aaKnown RBP23.63■■□□□ 1.37
PDE4D-204ENST00000358923 B4GALNT3Q6L9W6 998 aa23.63■■□□□ 1.37
PDE4D-204ENST00000358923 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
PDE4D-204ENST00000358923 SMG6Q86US8 1419 aaKnown RBP23.62■■□□□ 1.37
PDE4D-204ENST00000358923 ABCC11Q96J66 1382 aa23.62■■□□□ 1.37
PDE4D-204ENST00000358923 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
PDE4D-204ENST00000358923 PLIN1O60240 522 aa23.61■■□□□ 1.37
PDE4D-204ENST00000358923 IL27Q8NEV9 243 aa23.61■■□□□ 1.37
PDE4D-204ENST00000358923 SPINK5Q9NQ38 1064 aaPredicted RBP23.61■■□□□ 1.37
PDE4D-204ENST00000358923 RTN4Q9NQC3 1192 aaKnown RBP23.61■■□□□ 1.37
PDE4D-204ENST00000358923 FER1L4A9Z1Z3 1794 aa23.61■■□□□ 1.37
PDE4D-204ENST00000358923 CD163L1Q9NR16 1453 aa23.61■■□□□ 1.37
PDE4D-204ENST00000358923 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
PDE4D-204ENST00000358923 SETD1AO15047 1707 aaKnown RBP23.6■■□□□ 1.37
PDE4D-204ENST00000358923 NUDT16Q96DE0 195 aaKnown RBP23.6■■□□□ 1.37
PDE4D-204ENST00000358923 TERF2IPQ9NYB0 399 aa23.6■■□□□ 1.37
PDE4D-204ENST00000358923 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
PDE4D-204ENST00000358923 PRR36Q9H6K5 1346 aa23.59■■□□□ 1.37
PDE4D-204ENST00000358923 NME9Q86XW9 330 aa23.58■■□□□ 1.37
PDE4D-204ENST00000358923 BLMP54132 1417 aaPredicted RBP23.58■■□□□ 1.37
PDE4D-204ENST00000358923 PTPRUQ92729 1446 aa23.58■■□□□ 1.37
PDE4D-204ENST00000358923 SOX12O15370 315 aa23.57■■□□□ 1.36
PDE4D-204ENST00000358923 HDGFL2Q7Z4V5 671 aaPredicted RBP23.57■■□□□ 1.36
PDE4D-204ENST00000358923 ATAD2Q6PL18 1390 aa23.57■■□□□ 1.36
PDE4D-204ENST00000358923 THEMISQ8N1K5 641 aaPredicted RBP23.56■■□□□ 1.36
PDE4D-204ENST00000358923 U2SURPO15042 1029 aaKnown RBP23.55■■□□□ 1.36
PDE4D-204ENST00000358923 PMFBP1Q8TBY8 1022 aa23.55■■□□□ 1.36
PDE4D-204ENST00000358923 RTL5Q5HYW3 569 aaPredicted RBP23.54■■□□□ 1.36
PDE4D-204ENST00000358923 U2AF1L5P0DN76 240 aaPredicted RBP23.53■■□□□ 1.36
PDE4D-204ENST00000358923 U2AF1Q01081 240 aaKnown RBP eCLIP23.53■■□□□ 1.36
PDE4D-204ENST00000358923 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
PDE4D-204ENST00000358923 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
PDE4D-204ENST00000358923 KCNA6P17658 529 aa23.52■■□□□ 1.36
PDE4D-204ENST00000358923 NLRP1Q9C000 1473 aa23.52■■□□□ 1.36
PDE4D-204ENST00000358923 PUS7Q96PZ0 661 aaKnown RBP23.51■■□□□ 1.35
PDE4D-204ENST00000358923 PLEKHG1Q9ULL1 1385 aa23.51■■□□□ 1.35
PDE4D-204ENST00000358923 RIMS1Q86UR5 1692 aaKnown RBP23.51■■□□□ 1.35
PDE4D-204ENST00000358923 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
PDE4D-204ENST00000358923 CCDC61Q9Y6R9 512 aa23.49■■□□□ 1.35
PDE4D-204ENST00000358923 EMILIN1Q9Y6C2 1016 aa23.49■■□□□ 1.35
PDE4D-204ENST00000358923 PLEKHG5O94827 1062 aa23.48■■□□□ 1.35
PDE4D-204ENST00000358923 TCP11L2Q8N4U5 519 aa23.46■■□□□ 1.35
PDE4D-204ENST00000358923 POLR3AO14802 1390 aaPredicted RBP23.46■■□□□ 1.35
PDE4D-204ENST00000358923 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.34
PDE4D-204ENST00000358923 DUSP27Q5VZP5 1158 aa23.44■■□□□ 1.34
PDE4D-204ENST00000358923 GOLGA2Q08379 1002 aa23.44■■□□□ 1.34
PDE4D-204ENST00000358923 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
PDE4D-204ENST00000358923 C20orf194Q5TEA3 1177 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms