RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 AFAP1Q8N556 730 aa13.45□□□□□ -0.26
FN1-205ENST00000357867 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
FN1-205ENST00000357867 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
FN1-205ENST00000357867 MAGI1Q96QZ7 1491 aaPredicted RBP13.45□□□□□ -0.26
FN1-205ENST00000357867 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
FN1-205ENST00000357867 ZKSCAN1P17029 563 aaPredicted RBP13.44□□□□□ -0.26
FN1-205ENST00000357867 CCDC27Q2M243 656 aa13.44□□□□□ -0.26
FN1-205ENST00000357867 GNAI1P63096 354 aa13.44□□□□□ -0.26
FN1-205ENST00000357867 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
FN1-205ENST00000357867 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
FN1-205ENST00000357867 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
FN1-205ENST00000357867 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
FN1-205ENST00000357867 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
FN1-205ENST00000357867 ERC2O15083 957 aa13.43□□□□□ -0.26
FN1-205ENST00000357867 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
FN1-205ENST00000357867 SLC3A2P08195 630 aaKnown RBP13.42□□□□□ -0.26
FN1-205ENST00000357867 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
FN1-205ENST00000357867 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
FN1-205ENST00000357867 SPG7Q9UQ90 795 aa13.42□□□□□ -0.26
FN1-205ENST00000357867 WWC2Q6AWC2 1192 aa13.42□□□□□ -0.26
FN1-205ENST00000357867 TPM1P09493 284 aa13.42□□□□□ -0.26
FN1-205ENST00000357867 AIMP1Q12904 312 aaKnown RBP13.42□□□□□ -0.26
FN1-205ENST00000357867 CPLX1O14810 134 aa13.42□□□□□ -0.26
FN1-205ENST00000357867 TPM3P06753 285 aa13.42□□□□□ -0.26
FN1-205ENST00000357867 HMOX1P09601 288 aa13.41□□□□□ -0.26
FN1-205ENST00000357867 REC8O95072 547 aa13.41□□□□□ -0.26
FN1-205ENST00000357867 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
FN1-205ENST00000357867 R3HCC1Q9Y3T6 440 aaKnown RBP13.41□□□□□ -0.26
FN1-205ENST00000357867 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
FN1-205ENST00000357867 CABP4P57796 275 aa13.41□□□□□ -0.26
FN1-205ENST00000357867 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
FN1-205ENST00000357867 CD109Q6YHK3 1445 aa13.4□□□□□ -0.26
FN1-205ENST00000357867 GNL3LQ9NVN8 582 aaKnown RBP13.4□□□□□ -0.26
FN1-205ENST00000357867 HFM1A2PYH4 1435 aa13.4□□□□□ -0.26
FN1-205ENST00000357867 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
FN1-205ENST00000357867 NAP1L5Q96NT1 182 aaPredicted RBP13.4□□□□□ -0.26
FN1-205ENST00000357867 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
FN1-205ENST00000357867 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
FN1-205ENST00000357867 NOL8Q76FK4 1167 aaKnown RBP13.4□□□□□ -0.26
FN1-205ENST00000357867 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
FN1-205ENST00000357867 PRAM1Q96QH2 718 aa13.39□□□□□ -0.27
FN1-205ENST00000357867 TMEM132EQ6IEE7 984 aa13.39□□□□□ -0.27
FN1-205ENST00000357867 PRDM11Q9NQV5 511 aa13.39□□□□□ -0.27
FN1-205ENST00000357867 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
FN1-205ENST00000357867 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
FN1-205ENST00000357867 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
FN1-205ENST00000357867 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
FN1-205ENST00000357867 PLIN1O60240 522 aa13.39□□□□□ -0.27
FN1-205ENST00000357867 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
FN1-205ENST00000357867 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
FN1-205ENST00000357867 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
FN1-205ENST00000357867 XBP1P17861 261 aa13.38□□□□□ -0.27
FN1-205ENST00000357867 SAFBQ15424 915 aaKnown RBP eCLIP13.38□□□□□ -0.27
FN1-205ENST00000357867 ANKRD20A12PQ8NF67 263 aa13.38□□□□□ -0.27
FN1-205ENST00000357867 BCL2L13Q9BXK5 485 aa13.37□□□□□ -0.27
FN1-205ENST00000357867 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
FN1-205ENST00000357867 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
FN1-205ENST00000357867 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
FN1-205ENST00000357867 PBRM1Q86U86 1689 aa13.36□□□□□ -0.27
FN1-205ENST00000357867 FYB1O15117 783 aa13.36□□□□□ -0.27
FN1-205ENST00000357867 PDE4CQ08493 712 aa13.36□□□□□ -0.27
FN1-205ENST00000357867 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
FN1-205ENST00000357867 RAPGEF3O95398 923 aa13.36□□□□□ -0.27
FN1-205ENST00000357867 GOLGA6L19H0YKK7 550 aa13.36□□□□□ -0.27
FN1-205ENST00000357867 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
FN1-205ENST00000357867 CDK19Q9BWU1 502 aa13.36□□□□□ -0.27
FN1-205ENST00000357867 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
FN1-205ENST00000357867 AMER1Q5JTC6 1135 aaPredicted RBP13.36□□□□□ -0.27
FN1-205ENST00000357867 ERBINQ96RT1 1412 aa13.35□□□□□ -0.27
FN1-205ENST00000357867 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
FN1-205ENST00000357867 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
FN1-205ENST00000357867 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
FN1-205ENST00000357867 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
FN1-205ENST00000357867 MTHFSP49914 203 aa13.35□□□□□ -0.27
FN1-205ENST00000357867 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
FN1-205ENST00000357867 GOLGA6L1Q8N7Z2 621 aa13.34□□□□□ -0.27
FN1-205ENST00000357867 CNNM1Q9NRU3 951 aa13.34□□□□□ -0.27
FN1-205ENST00000357867 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
FN1-205ENST00000357867 ZNF652Q9Y2D9 606 aa13.34□□□□□ -0.27
FN1-205ENST00000357867 APAF1O14727 1248 aa13.34□□□□□ -0.27
FN1-205ENST00000357867 WASHC4Q2M389 1173 aa13.34□□□□□ -0.27
FN1-205ENST00000357867 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
FN1-205ENST00000357867 WDHD1O75717 1129 aaPredicted RBP13.33□□□□□ -0.28
FN1-205ENST00000357867 GGNBP2Q9H3C7 697 aa13.33□□□□□ -0.28
FN1-205ENST00000357867 TEX14Q8IWB6 1497 aa13.33□□□□□ -0.28
FN1-205ENST00000357867 DZIP1LQ8IYY4 767 aaKnown RBP13.33□□□□□ -0.28
FN1-205ENST00000357867 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
FN1-205ENST00000357867 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
FN1-205ENST00000357867 SLKQ9H2G2 1235 aaPredicted RBP13.32□□□□□ -0.28
FN1-205ENST00000357867 CCDC141Q6ZP82 1450 aa13.32□□□□□ -0.28
FN1-205ENST00000357867 KCNH5Q8NCM2 988 aa13.32□□□□□ -0.28
FN1-205ENST00000357867 DAPK1P53355 1430 aa13.32□□□□□ -0.28
FN1-205ENST00000357867 PCMTD1Q96MG8 357 aaPredicted RBP13.31□□□□□ -0.28
FN1-205ENST00000357867 MPHOSPH8Q99549 860 aa13.31□□□□□ -0.28
FN1-205ENST00000357867 STARD3NLO95772 234 aa13.31□□□□□ -0.28
FN1-205ENST00000357867 ERC1Q8IUD2 1116 aa13.31□□□□□ -0.28
FN1-205ENST00000357867 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
FN1-205ENST00000357867 RBM5P52756 815 aaKnown RBP eCLIP13.3□□□□□ -0.281e-19■■□□□ 13
FN1-205ENST00000357867 CCDC70Q6NSX1 233 aa13.3□□□□□ -0.28
FN1-205ENST00000357867 CNTROBQ8N137 903 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms