RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 MYOM2P54296 1465 aa26.44■■□□□ 1.82
COL13A1-202ENST00000357811 U2AF1L5P0DN76 240 aaPredicted RBP26.43■■□□□ 1.82
COL13A1-202ENST00000357811 U2AF1Q01081 240 aaKnown RBP eCLIP26.43■■□□□ 1.82
COL13A1-202ENST00000357811 SLC24A1O60721 1099 aa26.43■■□□□ 1.82
COL13A1-202ENST00000357811 KIDINS220Q9ULH0 1771 aa26.42■■□□□ 1.82
COL13A1-202ENST00000357811 RUNDC1Q96C34 613 aa26.41■■□□□ 1.82
COL13A1-202ENST00000357811 RLBP1P12271 317 aa26.4■■□□□ 1.82
COL13A1-202ENST00000357811 POLR3AO14802 1390 aaPredicted RBP26.39■■□□□ 1.82
COL13A1-202ENST00000357811 PPM1GO15355 546 aaPredicted RBP26.39■■□□□ 1.81
COL13A1-202ENST00000357811 U2SURPO15042 1029 aaKnown RBP26.38■■□□□ 1.81
COL13A1-202ENST00000357811 CD109Q6YHK3 1445 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 ZNF518AQ6AHZ1 1483 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 CGNL1Q0VF96 1302 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 SEC24BO95487 1268 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 RARSP54136 660 aaKnown RBP26.37■■□□□ 1.81
COL13A1-202ENST00000357811 GGNBP2Q9H3C7 697 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
COL13A1-202ENST00000357811 SRPK2P78362 688 aaKnown RBP26.36■■□□□ 1.81
COL13A1-202ENST00000357811 RTN4Q9NQC3 1192 aaKnown RBP26.36■■□□□ 1.81
COL13A1-202ENST00000357811 NFKBIBQ15653 356 aa26.35■■□□□ 1.81
COL13A1-202ENST00000357811 TSR2Q969E8 191 aaKnown RBP26.35■■□□□ 1.81
COL13A1-202ENST00000357811 CFAP53Q96M91 514 aa26.34■■□□□ 1.81
COL13A1-202ENST00000357811 PDE3AQ14432 1141 aa26.33■■□□□ 1.81
COL13A1-202ENST00000357811 IL27Q8NEV9 243 aa26.33■■□□□ 1.81
COL13A1-202ENST00000357811 PCDHB15Q9Y5E8 787 aa26.33■■□□□ 1.81
COL13A1-202ENST00000357811 MINK1Q8N4C8 1332 aaPredicted RBP26.32■■□□□ 1.8
COL13A1-202ENST00000357811 IDI1Q13907 227 aa26.32■■□□□ 1.8
COL13A1-202ENST00000357811 EVC2Q86UK5 1308 aa26.31■■□□□ 1.8
COL13A1-202ENST00000357811 SBNO2Q9Y2G9 1366 aa26.31■■□□□ 1.8
COL13A1-202ENST00000357811 ADGRB3O60242 1522 aa26.3■■□□□ 1.8
COL13A1-202ENST00000357811 NRXN1Q9ULB1 1477 aa26.3■■□□□ 1.8
COL13A1-202ENST00000357811 VGFO15240 615 aaPredicted RBP26.28■■□□□ 1.8
COL13A1-202ENST00000357811 FBLN1P23142 703 aa26.27■■□□□ 1.8
COL13A1-202ENST00000357811 IFT172Q9UG01 1749 aa26.27■■□□□ 1.8
COL13A1-202ENST00000357811 USP35Q9P2H5 1018 aa26.26■■□□□ 1.79
COL13A1-202ENST00000357811 POGZQ7Z3K3 1410 aa26.26■■□□□ 1.79
COL13A1-202ENST00000357811 QRICH2Q9H0J4 1663 aa26.26■■□□□ 1.79
COL13A1-202ENST00000357811 ADGRB1O14514 1584 aa26.25■■□□□ 1.79
COL13A1-202ENST00000357811 FRAT2O75474 233 aaPredicted RBP26.25■■□□□ 1.79
COL13A1-202ENST00000357811 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
COL13A1-202ENST00000357811 FRMPD1Q5SYB0 1578 aa26.24■■□□□ 1.79
COL13A1-202ENST00000357811 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
COL13A1-202ENST00000357811 POGKQ9P215 609 aa26.22■■□□□ 1.79
COL13A1-202ENST00000357811 WDR63Q8IWG1 891 aa26.21■■□□□ 1.79
COL13A1-202ENST00000357811 FTSJ3Q8IY81 847 aaKnown RBP26.21■■□□□ 1.79
COL13A1-202ENST00000357811 PRAM1Q96QH2 718 aa26.21■■□□□ 1.79
COL13A1-202ENST00000357811 SLKQ9H2G2 1235 aaPredicted RBP26.21■■□□□ 1.79
COL13A1-202ENST00000357811 PDZRN3Q9UPQ7 1066 aa26.21■■□□□ 1.79
COL13A1-202ENST00000357811 FBXO31Q5XUX0 539 aaPredicted RBP26.2■■□□□ 1.79
COL13A1-202ENST00000357811 SHPRHQ149N8 1683 aa26.2■■□□□ 1.79
COL13A1-202ENST00000357811 USP19O94966 1318 aa26.2■■□□□ 1.78
COL13A1-202ENST00000357811 EXOSC9Q06265 439 aaKnown RBP26.2■■□□□ 1.78
COL13A1-202ENST00000357811 RPGRIP1LQ68CZ1 1315 aa26.2■■□□□ 1.78
COL13A1-202ENST00000357811 NEURL4Q96JN8 1562 aa26.19■■□□□ 1.78
COL13A1-202ENST00000357811 LMTK2Q8IWU2 1503 aa26.19■■□□□ 1.78
COL13A1-202ENST00000357811 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
COL13A1-202ENST00000357811 SMC4Q9NTJ3 1288 aa26.19■■□□□ 1.78
COL13A1-202ENST00000357811 A0A1W2PP64 1363 aa26.18■■□□□ 1.78
COL13A1-202ENST00000357811 MYH16Q9H6N6 1097 aa26.18■■□□□ 1.78
COL13A1-202ENST00000357811 ANKRD36BQ8N2N9 1353 aa26.18■■□□□ 1.78
COL13A1-202ENST00000357811 ABCC3O15438 1527 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 MYO3AQ8NEV4 1616 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 PPLO60437 1756 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 SETBP1Q9Y6X0 1596 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 TULP4Q9NRJ4 1543 aa26.16■■□□□ 1.78
COL13A1-202ENST00000357811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.16■■□□□ 1.78
COL13A1-202ENST00000357811 SPRYD3Q8NCJ5 442 aa26.16■■□□□ 1.78
COL13A1-202ENST00000357811 STAG3Q9UJ98 1225 aa26.15■■□□□ 1.78
COL13A1-202ENST00000357811 MAPK8IP3Q9UPT6 1336 aa26.15■■□□□ 1.78
COL13A1-202ENST00000357811 GSE1Q14687 1217 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 PMFBP1Q8TBY8 1022 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 GLI2P10070 1586 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 IQSEC2Q5JU85 1478 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 MLH3Q9UHC1 1453 aa26.14■■□□□ 1.77
COL13A1-202ENST00000357811 FYB1O15117 783 aa26.13■■□□□ 1.77
COL13A1-202ENST00000357811 TMPOP42166 694 aaKnown RBP26.13■■□□□ 1.77
COL13A1-202ENST00000357811 ITPRIPQ8IWB1 547 aa26.13■■□□□ 1.77
COL13A1-202ENST00000357811 BRPF3Q9ULD4 1205 aa26.13■■□□□ 1.77
COL13A1-202ENST00000357811 ZKSCAN2Q63HK3 967 aa26.12■■□□□ 1.77
COL13A1-202ENST00000357811 DZIP1LQ8IYY4 767 aaKnown RBP26.12■■□□□ 1.77
COL13A1-202ENST00000357811 SIGLEC1Q9BZZ2 1709 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 SSH1Q8WYL5 1049 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 RIPK4P57078 832 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 MVPQ14764 893 aaKnown RBP26.11■■□□□ 1.77
COL13A1-202ENST00000357811 CABP1Q9NZU7 370 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.11■■□□□ 1.77
COL13A1-202ENST00000357811 HECW2Q9P2P5 1572 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 TRIM35Q9UPQ4 493 aa26.1■■□□□ 1.77
COL13A1-202ENST00000357811 YEATS2Q9ULM3 1422 aa26.1■■□□□ 1.77
COL13A1-202ENST00000357811 RWDD1Q9H446 243 aaPredicted RBP26.09■■□□□ 1.77
COL13A1-202ENST00000357811 TRIM27P14373 513 aa26.09■■□□□ 1.77
COL13A1-202ENST00000357811 CCDC27Q2M243 656 aa26.09■■□□□ 1.77
COL13A1-202ENST00000357811 NINLQ9Y2I6 1382 aa26.09■■□□□ 1.77
COL13A1-202ENST00000357811 ZC3H13Q5T200 1668 aaKnown RBP26.08■■□□□ 1.76
COL13A1-202ENST00000357811 WAPLQ7Z5K2 1190 aa26.07■■□□□ 1.76
COL13A1-202ENST00000357811 NOB1Q9ULX3 412 aaKnown RBP26.07■■□□□ 1.76
COL13A1-202ENST00000357811 PLEKHF1Q96S99 279 aa26.07■■□□□ 1.76
COL13A1-202ENST00000357811 MLECQ14165 292 aa26.06■■□□□ 1.76
COL13A1-202ENST00000357811 CDK19Q9BWU1 502 aa26.06■■□□□ 1.76
COL13A1-202ENST00000357811 TERF2IPQ9NYB0 399 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms