RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 MYOM2P54296 1465 aa26.44■■□□□ 1.82
COL13A1-202ENST00000357811 U2AF1L5P0DN76 240 aaPredicted RBP26.43■■□□□ 1.82
COL13A1-202ENST00000357811 U2AF1Q01081 240 aaKnown RBP eCLIP26.43■■□□□ 1.82
COL13A1-202ENST00000357811 SLC24A1O60721 1099 aa26.43■■□□□ 1.82
COL13A1-202ENST00000357811 KIDINS220Q9ULH0 1771 aa26.42■■□□□ 1.82
COL13A1-202ENST00000357811 RUNDC1Q96C34 613 aa26.41■■□□□ 1.82
COL13A1-202ENST00000357811 RLBP1P12271 317 aa26.4■■□□□ 1.82
COL13A1-202ENST00000357811 POLR3AO14802 1390 aaPredicted RBP26.39■■□□□ 1.82
COL13A1-202ENST00000357811 PPM1GO15355 546 aaPredicted RBP26.39■■□□□ 1.81
COL13A1-202ENST00000357811 U2SURPO15042 1029 aaKnown RBP26.38■■□□□ 1.81
COL13A1-202ENST00000357811 CD109Q6YHK3 1445 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 ZNF518AQ6AHZ1 1483 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 CGNL1Q0VF96 1302 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 SEC24BO95487 1268 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 RARSP54136 660 aaKnown RBP26.37■■□□□ 1.81
COL13A1-202ENST00000357811 GGNBP2Q9H3C7 697 aa26.37■■□□□ 1.81
COL13A1-202ENST00000357811 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
COL13A1-202ENST00000357811 SRPK2P78362 688 aaKnown RBP26.36■■□□□ 1.81
COL13A1-202ENST00000357811 RTN4Q9NQC3 1192 aaKnown RBP26.36■■□□□ 1.81
COL13A1-202ENST00000357811 NFKBIBQ15653 356 aa26.35■■□□□ 1.81
COL13A1-202ENST00000357811 TSR2Q969E8 191 aaKnown RBP26.35■■□□□ 1.81
COL13A1-202ENST00000357811 CFAP53Q96M91 514 aa26.34■■□□□ 1.81
COL13A1-202ENST00000357811 PDE3AQ14432 1141 aa26.33■■□□□ 1.81
COL13A1-202ENST00000357811 IL27Q8NEV9 243 aa26.33■■□□□ 1.81
COL13A1-202ENST00000357811 PCDHB15Q9Y5E8 787 aa26.33■■□□□ 1.81
COL13A1-202ENST00000357811 MINK1Q8N4C8 1332 aaPredicted RBP26.32■■□□□ 1.8
COL13A1-202ENST00000357811 IDI1Q13907 227 aa26.32■■□□□ 1.8
COL13A1-202ENST00000357811 EVC2Q86UK5 1308 aa26.31■■□□□ 1.8
COL13A1-202ENST00000357811 SBNO2Q9Y2G9 1366 aa26.31■■□□□ 1.8
COL13A1-202ENST00000357811 ADGRB3O60242 1522 aa26.3■■□□□ 1.8
COL13A1-202ENST00000357811 NRXN1Q9ULB1 1477 aa26.3■■□□□ 1.8
COL13A1-202ENST00000357811 VGFO15240 615 aaPredicted RBP26.28■■□□□ 1.8
COL13A1-202ENST00000357811 FBLN1P23142 703 aa26.27■■□□□ 1.8
COL13A1-202ENST00000357811 IFT172Q9UG01 1749 aa26.27■■□□□ 1.8
COL13A1-202ENST00000357811 USP35Q9P2H5 1018 aa26.26■■□□□ 1.79
COL13A1-202ENST00000357811 POGZQ7Z3K3 1410 aa26.26■■□□□ 1.79
COL13A1-202ENST00000357811 QRICH2Q9H0J4 1663 aa26.26■■□□□ 1.79
COL13A1-202ENST00000357811 ADGRB1O14514 1584 aa26.25■■□□□ 1.79
COL13A1-202ENST00000357811 FRAT2O75474 233 aaPredicted RBP26.25■■□□□ 1.79
COL13A1-202ENST00000357811 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
COL13A1-202ENST00000357811 FRMPD1Q5SYB0 1578 aa26.24■■□□□ 1.79
COL13A1-202ENST00000357811 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
COL13A1-202ENST00000357811 POGKQ9P215 609 aa26.22■■□□□ 1.79
COL13A1-202ENST00000357811 WDR63Q8IWG1 891 aa26.21■■□□□ 1.79
COL13A1-202ENST00000357811 FTSJ3Q8IY81 847 aaKnown RBP26.21■■□□□ 1.79
COL13A1-202ENST00000357811 PRAM1Q96QH2 718 aa26.21■■□□□ 1.79
COL13A1-202ENST00000357811 SLKQ9H2G2 1235 aaPredicted RBP26.21■■□□□ 1.79
COL13A1-202ENST00000357811 PDZRN3Q9UPQ7 1066 aa26.21■■□□□ 1.79
COL13A1-202ENST00000357811 FBXO31Q5XUX0 539 aaPredicted RBP26.2■■□□□ 1.79
COL13A1-202ENST00000357811 SHPRHQ149N8 1683 aa26.2■■□□□ 1.79
COL13A1-202ENST00000357811 USP19O94966 1318 aa26.2■■□□□ 1.78
COL13A1-202ENST00000357811 EXOSC9Q06265 439 aaKnown RBP26.2■■□□□ 1.78
COL13A1-202ENST00000357811 RPGRIP1LQ68CZ1 1315 aa26.2■■□□□ 1.78
COL13A1-202ENST00000357811 NEURL4Q96JN8 1562 aa26.19■■□□□ 1.78
COL13A1-202ENST00000357811 LMTK2Q8IWU2 1503 aa26.19■■□□□ 1.78
COL13A1-202ENST00000357811 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
COL13A1-202ENST00000357811 SMC4Q9NTJ3 1288 aa26.19■■□□□ 1.78
COL13A1-202ENST00000357811 A0A1W2PP64 1363 aa26.18■■□□□ 1.78
COL13A1-202ENST00000357811 MYH16Q9H6N6 1097 aa26.18■■□□□ 1.78
COL13A1-202ENST00000357811 ANKRD36BQ8N2N9 1353 aa26.18■■□□□ 1.78
COL13A1-202ENST00000357811 ABCC3O15438 1527 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 MYO3AQ8NEV4 1616 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 PPLO60437 1756 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 SETBP1Q9Y6X0 1596 aa26.17■■□□□ 1.78
COL13A1-202ENST00000357811 TULP4Q9NRJ4 1543 aa26.16■■□□□ 1.78
COL13A1-202ENST00000357811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.16■■□□□ 1.78
COL13A1-202ENST00000357811 SPRYD3Q8NCJ5 442 aa26.16■■□□□ 1.78
COL13A1-202ENST00000357811 STAG3Q9UJ98 1225 aa26.15■■□□□ 1.78
COL13A1-202ENST00000357811 MAPK8IP3Q9UPT6 1336 aa26.15■■□□□ 1.78
COL13A1-202ENST00000357811 GSE1Q14687 1217 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 PMFBP1Q8TBY8 1022 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 GLI2P10070 1586 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 IQSEC2Q5JU85 1478 aa26.14■■□□□ 1.78
COL13A1-202ENST00000357811 MLH3Q9UHC1 1453 aa26.14■■□□□ 1.77
COL13A1-202ENST00000357811 FYB1O15117 783 aa26.13■■□□□ 1.77
COL13A1-202ENST00000357811 TMPOP42166 694 aaKnown RBP26.13■■□□□ 1.77
COL13A1-202ENST00000357811 ITPRIPQ8IWB1 547 aa26.13■■□□□ 1.77
COL13A1-202ENST00000357811 BRPF3Q9ULD4 1205 aa26.13■■□□□ 1.77
COL13A1-202ENST00000357811 ZKSCAN2Q63HK3 967 aa26.12■■□□□ 1.77
COL13A1-202ENST00000357811 DZIP1LQ8IYY4 767 aaKnown RBP26.12■■□□□ 1.77
COL13A1-202ENST00000357811 SIGLEC1Q9BZZ2 1709 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 SSH1Q8WYL5 1049 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 RIPK4P57078 832 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 MVPQ14764 893 aaKnown RBP26.11■■□□□ 1.77
COL13A1-202ENST00000357811 CABP1Q9NZU7 370 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.11■■□□□ 1.77
COL13A1-202ENST00000357811 HECW2Q9P2P5 1572 aa26.11■■□□□ 1.77
COL13A1-202ENST00000357811 TRIM35Q9UPQ4 493 aa26.1■■□□□ 1.77
COL13A1-202ENST00000357811 YEATS2Q9ULM3 1422 aa26.1■■□□□ 1.77
COL13A1-202ENST00000357811 RWDD1Q9H446 243 aaPredicted RBP26.09■■□□□ 1.77
COL13A1-202ENST00000357811 TRIM27P14373 513 aa26.09■■□□□ 1.77
COL13A1-202ENST00000357811 CCDC27Q2M243 656 aa26.09■■□□□ 1.77
COL13A1-202ENST00000357811 NINLQ9Y2I6 1382 aa26.09■■□□□ 1.77
COL13A1-202ENST00000357811 ZC3H13Q5T200 1668 aaKnown RBP26.08■■□□□ 1.76
COL13A1-202ENST00000357811 WAPLQ7Z5K2 1190 aa26.07■■□□□ 1.76
COL13A1-202ENST00000357811 NOB1Q9ULX3 412 aaKnown RBP26.07■■□□□ 1.76
COL13A1-202ENST00000357811 PLEKHF1Q96S99 279 aa26.07■■□□□ 1.76
COL13A1-202ENST00000357811 MLECQ14165 292 aa26.06■■□□□ 1.76
COL13A1-202ENST00000357811 CDK19Q9BWU1 502 aa26.06■■□□□ 1.76
COL13A1-202ENST00000357811 TERF2IPQ9NYB0 399 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms