RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ERLIN1O75477 346 aa15.44■□□□□ 0.06
SMC4-202ENST00000357388 HSP90AB3PQ58FF7 597 aa15.44■□□□□ 0.06
SMC4-202ENST00000357388 DEF6Q9H4E7 631 aa15.44■□□□□ 0.06
SMC4-202ENST00000357388 CT47A1Q5JQC4 288 aaPredicted RBP15.44■□□□□ 0.06
SMC4-202ENST00000357388 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
SMC4-202ENST00000357388 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
SMC4-202ENST00000357388 MCM2P49736 904 aa15.43■□□□□ 0.06
SMC4-202ENST00000357388 HSP90AB4PQ58FF6 505 aa15.43■□□□□ 0.06
SMC4-202ENST00000357388 ERLIN2O94905 339 aa15.43■□□□□ 0.06
SMC4-202ENST00000357388 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
SMC4-202ENST00000357388 ERICH2A1L162 156 aa15.42■□□□□ 0.06
SMC4-202ENST00000357388 ODF2Q5BJF6 829 aa15.42■□□□□ 0.06
SMC4-202ENST00000357388 AXDND1Q5T1B0 1012 aaPredicted RBP15.42■□□□□ 0.06
SMC4-202ENST00000357388 COG6Q9Y2V7 657 aa15.42■□□□□ 0.06
SMC4-202ENST00000357388 DZIP1LQ8IYY4 767 aaKnown RBP15.42■□□□□ 0.06
SMC4-202ENST00000357388 RBM33Q96EV2 1170 aaKnown RBP15.42■□□□□ 0.06
SMC4-202ENST00000357388 TRIM5Q9C035 493 aa15.42■□□□□ 0.06
SMC4-202ENST00000357388 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
SMC4-202ENST00000357388 GOLGA6L10A6NI86 522 aa15.42■□□□□ 0.06
SMC4-202ENST00000357388 CT47B1P0C2W7 299 aaPredicted RBP15.42■□□□□ 0.06
SMC4-202ENST00000357388 TXLNBQ8N3L3 684 aa15.41■□□□□ 0.06
SMC4-202ENST00000357388 CDC45O75419 566 aa15.41■□□□□ 0.06
SMC4-202ENST00000357388 IFIT2P09913 472 aaKnown RBP15.41■□□□□ 0.06
SMC4-202ENST00000357388 RABEP1Q15276 862 aa15.41■□□□□ 0.06
SMC4-202ENST00000357388 FILIP1LQ4L180 1135 aa15.41■□□□□ 0.06
SMC4-202ENST00000357388 FBXW7Q969H0 707 aa15.41■□□□□ 0.06
SMC4-202ENST00000357388 PSME1Q06323 249 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 CCDC144AA2RUR9 1427 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 HSP90AB2PQ58FF8 381 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 SYTL4Q96C24 671 aaPredicted RBP15.4■□□□□ 0.06
SMC4-202ENST00000357388 ERC2O15083 957 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 OFD1O75665 1012 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 PDILTQ8N807 584 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 CCDC112Q8NEF3 446 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
SMC4-202ENST00000357388 PSMA5P28066 241 aa15.39■□□□□ 0.05
SMC4-202ENST00000357388 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
SMC4-202ENST00000357388 PLIN1O60240 522 aa15.38■□□□□ 0.05
SMC4-202ENST00000357388 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.051e-39■■■■■ 140
SMC4-202ENST00000357388 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
SMC4-202ENST00000357388 PLCD4Q9BRC7 762 aa15.38■□□□□ 0.05
SMC4-202ENST00000357388 EIF2S2P20042 333 aaKnown RBP15.37■□□□□ 0.05
SMC4-202ENST00000357388 PDCP20941 246 aa15.37■□□□□ 0.05
SMC4-202ENST00000357388 SDF4Q9BRK5 362 aa15.37■□□□□ 0.05
SMC4-202ENST00000357388 JPH4Q96JJ6 628 aa15.37■□□□□ 0.05
SMC4-202ENST00000357388 NINLQ9Y2I6 1382 aa15.37■□□□□ 0.05
SMC4-202ENST00000357388 EPS15P42566 896 aa15.37■□□□□ 0.05
SMC4-202ENST00000357388 RAPGEF4Q8WZA2 1011 aa15.36■□□□□ 0.05
SMC4-202ENST00000357388 XBP1P17861 261 aa15.36■□□□□ 0.05
SMC4-202ENST00000357388 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
SMC4-202ENST00000357388 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
SMC4-202ENST00000357388 ATF3P18847 181 aa15.36■□□□□ 0.05
SMC4-202ENST00000357388 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
SMC4-202ENST00000357388 NFXL1Q6ZNB6 911 aa15.36■□□□□ 0.05
SMC4-202ENST00000357388 LUC7LQ9NQ29 371 aaKnown RBP15.36■□□□□ 0.05
SMC4-202ENST00000357388 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
SMC4-202ENST00000357388 KLHL34Q8N239 644 aa15.35■□□□□ 0.05
SMC4-202ENST00000357388 UQCRHLA0A096LP55 91 aa15.35■□□□□ 0.05
SMC4-202ENST00000357388 UQCRHP07919 91 aa15.35■□□□□ 0.05
SMC4-202ENST00000357388 RBM10P98175 930 aaKnown RBP15.35■□□□□ 0.05
SMC4-202ENST00000357388 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
SMC4-202ENST00000357388 SMC2O95347 1197 aa15.34■□□□□ 0.05
SMC4-202ENST00000357388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■■■■■ 397.5
SMC4-202ENST00000357388 BRPF3Q9ULD4 1205 aa15.34■□□□□ 0.05
SMC4-202ENST00000357388 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
SMC4-202ENST00000357388 RNF214Q8ND24 703 aa15.34■□□□□ 0.05
SMC4-202ENST00000357388 RRP7AQ9Y3A4 280 aaKnown RBP15.34■□□□□ 0.05
SMC4-202ENST00000357388 ZNF396Q96N95 335 aaPredicted RBP15.33■□□□□ 0.05
SMC4-202ENST00000357388 GIMAP7Q8NHV1 300 aa15.33■□□□□ 0.05
SMC4-202ENST00000357388 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.05
SMC4-202ENST00000357388 DYDC1Q8WWB3 177 aa15.33■□□□□ 0.04
SMC4-202ENST00000357388 DACH1Q9UI36 760 aa15.33■□□□□ 0.04
SMC4-202ENST00000357388 CCDC192P0DO97 292 aa15.33■□□□□ 0.04
SMC4-202ENST00000357388 KANK4Q5T7N3 995 aaPredicted RBP15.33■□□□□ 0.04
SMC4-202ENST00000357388 PANK3Q9H999 370 aa15.33■□□□□ 0.04
SMC4-202ENST00000357388 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
SMC4-202ENST00000357388 MAGEC2Q9UBF1 373 aaPredicted RBP15.32■□□□□ 0.04
SMC4-202ENST00000357388 MINK1Q8N4C8 1332 aaPredicted RBP15.32■□□□□ 0.04
SMC4-202ENST00000357388 BCL2L13Q9BXK5 485 aa15.32■□□□□ 0.04
SMC4-202ENST00000357388 CBFA2T2O43439 604 aa15.32■□□□□ 0.04
SMC4-202ENST00000357388 GRPEL1Q9HAV7 217 aa15.31■□□□□ 0.04
SMC4-202ENST00000357388 RALYLQ86SE5 291 aaKnown RBP15.31■□□□□ 0.04
SMC4-202ENST00000357388 KIF2AO00139 706 aaPredicted RBP15.31■□□□□ 0.04
SMC4-202ENST00000357388 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
SMC4-202ENST00000357388 GBP3Q9H0R5 595 aa15.31■□□□□ 0.04
SMC4-202ENST00000357388 WWC2Q6AWC2 1192 aa15.3■□□□□ 0.04
SMC4-202ENST00000357388 FAM107BQ9H098 131 aa15.3■□□□□ 0.04
SMC4-202ENST00000357388 EZRP15311 586 aaKnown RBP15.3■□□□□ 0.04
SMC4-202ENST00000357388 FKBP5Q13451 457 aaPredicted RBP15.3■□□□□ 0.04
SMC4-202ENST00000357388 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
SMC4-202ENST00000357388 AEBP1Q8IUX7 1158 aa15.29■□□□□ 0.04
SMC4-202ENST00000357388 CALCOCO1Q9P1Z2 691 aa15.29■□□□□ 0.04
SMC4-202ENST00000357388 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
SMC4-202ENST00000357388 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
SMC4-202ENST00000357388 JMYQ8N9B5 988 aa15.28■□□□□ 0.04
SMC4-202ENST00000357388 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
SMC4-202ENST00000357388 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
SMC4-202ENST00000357388 ESPNB1AK53 854 aa15.28■□□□□ 0.04
SMC4-202ENST00000357388 HIP1O00291 1037 aa15.28■□□□□ 0.04
SMC4-202ENST00000357388 RAPGEF2Q9Y4G8 1499 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms