RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TRPM2O94759 1503 aa15.46■□□□□ 0.07
SMARCAL1-201ENST00000357276 COG6Q9Y2V7 657 aa15.46■□□□□ 0.07
SMARCAL1-201ENST00000357276 DIP2BQ9P265 1576 aa15.46■□□□□ 0.07
SMARCAL1-201ENST00000357276 POLR3AO14802 1390 aaPredicted RBP15.45■□□□□ 0.06
SMARCAL1-201ENST00000357276 ZNF518AQ6AHZ1 1483 aa15.45■□□□□ 0.06
SMARCAL1-201ENST00000357276 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 NEURL4Q96JN8 1562 aa15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 PANK2Q9BZ23 570 aa15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 UPF2Q9HAU5 1272 aaKnown RBP15.44■□□□□ 0.06
SMARCAL1-201ENST00000357276 NCOA3Q9Y6Q9 1424 aa15.43■□□□□ 0.06
SMARCAL1-201ENST00000357276 PNNQ9H307 717 aaKnown RBP15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 RRP9O43818 475 aaKnown RBP15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 RARSP54136 660 aaKnown RBP15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 ERVK-7P63135 1459 aa15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 KANK1Q14678 1352 aa15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 MRE11P49959 708 aa15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 ISY1Q9ULR0 285 aaKnown RBP15.42■□□□□ 0.06
SMARCAL1-201ENST00000357276 PTPRTO14522 1441 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 POGZQ7Z3K3 1410 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 CLTCL1P53675 1640 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 MYO3AQ8NEV4 1616 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 DDIT3P35638 169 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 GLIPR1L2Q4G1C9 344 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 CHMP5Q9NZZ3 219 aa15.41■□□□□ 0.06
SMARCAL1-201ENST00000357276 HECW2Q9P2P5 1572 aa15.4■□□□□ 0.06
SMARCAL1-201ENST00000357276 RLBP1P12271 317 aa15.4■□□□□ 0.06
SMARCAL1-201ENST00000357276 SPAG9O60271 1321 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-201ENST00000357276 PPRC1Q5VV67 1664 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-201ENST00000357276 TRAK2O60296 914 aa15.39■□□□□ 0.05
SMARCAL1-201ENST00000357276 PKNOX2Q96KN3 472 aa15.39■□□□□ 0.05
SMARCAL1-201ENST00000357276 VWDEQ8N2E2 1590 aa15.39■□□□□ 0.05
SMARCAL1-201ENST00000357276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■■□□ 16.8
SMARCAL1-201ENST00000357276 CYB5RLQ6IPT4 315 aa15.38■□□□□ 0.05
SMARCAL1-201ENST00000357276 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
SMARCAL1-201ENST00000357276 KIF13AQ9H1H9 1805 aa15.37■□□□□ 0.05
SMARCAL1-201ENST00000357276 NAP1L5Q96NT1 182 aaPredicted RBP15.37■□□□□ 0.05
SMARCAL1-201ENST00000357276 CANXP27824 592 aaKnown RBP15.36■□□□□ 0.05
SMARCAL1-201ENST00000357276 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
SMARCAL1-201ENST00000357276 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
SMARCAL1-201ENST00000357276 GRPEL1Q9HAV7 217 aa15.36■□□□□ 0.05
SMARCAL1-201ENST00000357276 USP32Q8NFA0 1604 aa15.36■□□□□ 0.05
SMARCAL1-201ENST00000357276 WDR63Q8IWG1 891 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 HSP90AA1P07900 732 aaKnown RBP15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 C22orf23Q9BZE7 217 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 TNNQ9UQP3 1299 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 TET3O43151 1660 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 IFT172Q9UG01 1749 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 ERBB4Q15303 1308 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 HSP90AA2PQ14568 343 aaPredicted RBP15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 CCDC27Q2M243 656 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 ABCA6Q8N139 1617 aa15.35■□□□□ 0.05
SMARCAL1-201ENST00000357276 DDX11L8A8MPP1 907 aa15.34■□□□□ 0.05
SMARCAL1-201ENST00000357276 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
SMARCAL1-201ENST00000357276 ESPNB1AK53 854 aa15.34■□□□□ 0.05
SMARCAL1-201ENST00000357276 GZF1Q9H116 711 aaPredicted RBP15.34■□□□□ 0.05
SMARCAL1-201ENST00000357276 MROH1Q8NDA8 1641 aa15.33■□□□□ 0.05
SMARCAL1-201ENST00000357276 ADGRB2O60241 1585 aa15.33■□□□□ 0.05
SMARCAL1-201ENST00000357276 MYOM2P54296 1465 aa15.33■□□□□ 0.04
SMARCAL1-201ENST00000357276 SBNO2Q9Y2G9 1366 aa15.33■□□□□ 0.04
SMARCAL1-201ENST00000357276 RUNDC1Q96C34 613 aa15.32■□□□□ 0.04
SMARCAL1-201ENST00000357276 AFAP1Q8N556 730 aa15.32■□□□□ 0.04
SMARCAL1-201ENST00000357276 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
SMARCAL1-201ENST00000357276 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
SMARCAL1-201ENST00000357276 MVPQ14764 893 aaKnown RBP15.32■□□□□ 0.04
SMARCAL1-201ENST00000357276 MYH16Q9H6N6 1097 aa15.32■□□□□ 0.04
SMARCAL1-201ENST00000357276 LMTK2Q8IWU2 1503 aa15.31■□□□□ 0.04
SMARCAL1-201ENST00000357276 ZMYND15Q9H091 742 aa15.31■□□□□ 0.04
SMARCAL1-201ENST00000357276 SNX21Q969T3 373 aa15.31■□□□□ 0.04
SMARCAL1-201ENST00000357276 HDAC1Q13547 482 aaPredicted RBP15.3■□□□□ 0.04
SMARCAL1-201ENST00000357276 RBM25P49756 843 aaKnown RBP15.3■□□□□ 0.04
SMARCAL1-201ENST00000357276 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
SMARCAL1-201ENST00000357276 SMC5Q8IY18 1101 aa15.29■□□□□ 0.04
SMARCAL1-201ENST00000357276 ARXQ96QS3 562 aa15.29■□□□□ 0.04
SMARCAL1-201ENST00000357276 REREQ9P2R6 1566 aa15.29■□□□□ 0.04
SMARCAL1-201ENST00000357276 NRXN1Q9ULB1 1477 aa15.29■□□□□ 0.04
SMARCAL1-201ENST00000357276 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
SMARCAL1-201ENST00000357276 TCP11L2Q8N4U5 519 aa15.28■□□□□ 0.04
SMARCAL1-201ENST00000357276 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
SMARCAL1-201ENST00000357276 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
SMARCAL1-201ENST00000357276 GAS2L3Q86XJ1 694 aa15.27■□□□□ 0.03
SMARCAL1-201ENST00000357276 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
SMARCAL1-201ENST00000357276 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
SMARCAL1-201ENST00000357276 SETBP1Q9Y6X0 1596 aa15.26■□□□□ 0.03
SMARCAL1-201ENST00000357276 TPM2P07951 284 aa15.26■□□□□ 0.03
SMARCAL1-201ENST00000357276 MFAP1P55081 439 aaKnown RBP15.26■□□□□ 0.03
SMARCAL1-201ENST00000357276 HSCBQ8IWL3 235 aa15.26■□□□□ 0.03
SMARCAL1-201ENST00000357276 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
SMARCAL1-201ENST00000357276 TNPO1Q92973 898 aaKnown RBP15.25■□□□□ 0.03
SMARCAL1-201ENST00000357276 ZKSCAN2Q63HK3 967 aa15.24■□□□□ 0.03
SMARCAL1-201ENST00000357276 TSPOAP1O95153 1857 aa15.24■□□□□ 0.03
SMARCAL1-201ENST00000357276 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
SMARCAL1-201ENST00000357276 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms