RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 SIN3AQ96ST3 1273 aa19.7■□□□□ 0.74
SHANK2-202ENST00000357171 C1orf167Q5SNV9 1468 aa19.7■□□□□ 0.74
SHANK2-202ENST00000357171 FMN2Q9NZ56 1722 aa19.68■□□□□ 0.74
SHANK2-202ENST00000357171 MED1Q15648 1581 aaPredicted RBP19.68■□□□□ 0.74
SHANK2-202ENST00000357171 ARHGEF28Q8N1W1 1705 aaKnown RBP19.67■□□□□ 0.74
SHANK2-202ENST00000357171 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
SHANK2-202ENST00000357171 ADGRB2O60241 1585 aa19.65■□□□□ 0.74
SHANK2-202ENST00000357171 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
SHANK2-202ENST00000357171 SHPRHQ149N8 1683 aa19.63■□□□□ 0.73
SHANK2-202ENST00000357171 RGPD8O14715 1765 aaPredicted RBP19.62■□□□□ 0.73
SHANK2-202ENST00000357171 TRPM1Q7Z4N2 1603 aa19.61■□□□□ 0.73
SHANK2-202ENST00000357171 JCADQ9P266 1359 aa19.61■□□□□ 0.73
SHANK2-202ENST00000357171 DISP3Q9P2K9 1392 aa19.61■□□□□ 0.73
SHANK2-202ENST00000357171 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
SHANK2-202ENST00000357171 NEUROD1Q13562 356 aa19.6■□□□□ 0.73
SHANK2-202ENST00000357171 ORAI2Q96SN7 254 aa19.6■□□□□ 0.73
SHANK2-202ENST00000357171 NBPF1Q3BBV0 1214 aa19.59■□□□□ 0.73
SHANK2-202ENST00000357171 USP32Q8NFA0 1604 aa19.58■□□□□ 0.72
SHANK2-202ENST00000357171 POGKQ9P215 609 aa19.57■□□□□ 0.72
SHANK2-202ENST00000357171 SOS2Q07890 1332 aaPredicted RBP19.57■□□□□ 0.72
SHANK2-202ENST00000357171 KIF1AQ12756 1690 aa19.57■□□□□ 0.72
SHANK2-202ENST00000357171 SAFB2Q14151 953 aaKnown RBP eCLIP19.55■□□□□ 0.72
SHANK2-202ENST00000357171 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
SHANK2-202ENST00000357171 ANKARQ7Z5J8 1434 aa19.54■□□□□ 0.72
SHANK2-202ENST00000357171 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
SHANK2-202ENST00000357171 ESCO1Q5FWF5 840 aa19.53■□□□□ 0.72
SHANK2-202ENST00000357171 LRRC59Q96AG4 307 aaKnown RBP19.53■□□□□ 0.72
SHANK2-202ENST00000357171 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
SHANK2-202ENST00000357171 PXDNQ92626 1479 aa19.53■□□□□ 0.72
SHANK2-202ENST00000357171 NBPF8Q3BBV2 869 aa19.51■□□□□ 0.71
SHANK2-202ENST00000357171 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
SHANK2-202ENST00000357171 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
SHANK2-202ENST00000357171 MINK1Q8N4C8 1332 aaPredicted RBP19.51■□□□□ 0.71
SHANK2-202ENST00000357171 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
SHANK2-202ENST00000357171 NUTM2FA1L443 756 aa19.5■□□□□ 0.71
SHANK2-202ENST00000357171 LRP6O75581 1613 aa19.5■□□□□ 0.71
SHANK2-202ENST00000357171 COL22A1Q8NFW1 1626 aaPredicted RBP19.5■□□□□ 0.71
SHANK2-202ENST00000357171 EIF3AQ14152 1382 aaKnown RBP19.49■□□□□ 0.71
SHANK2-202ENST00000357171 PNPLA6Q8IY17 1366 aa19.49■□□□□ 0.71
SHANK2-202ENST00000357171 TONSLQ96HA7 1378 aa19.49■□□□□ 0.71
SHANK2-202ENST00000357171 WASLO00401 505 aaPredicted RBP19.49■□□□□ 0.71
SHANK2-202ENST00000357171 HIRIP3Q9BW71 556 aaPredicted RBP19.48■□□□□ 0.71
SHANK2-202ENST00000357171 QRICH2Q9H0J4 1663 aa19.48■□□□□ 0.71
SHANK2-202ENST00000357171 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
SHANK2-202ENST00000357171 FOXO3O43524 673 aa19.47■□□□□ 0.71
SHANK2-202ENST00000357171 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
SHANK2-202ENST00000357171 ITSN1Q15811 1721 aa19.47■□□□□ 0.71
SHANK2-202ENST00000357171 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
SHANK2-202ENST00000357171 ILDR2Q71H61 639 aa19.46■□□□□ 0.71
SHANK2-202ENST00000357171 PHF8Q9UPP1 1060 aa19.46■□□□□ 0.71
SHANK2-202ENST00000357171 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.71
SHANK2-202ENST00000357171 ATP7BP35670 1465 aa19.45■□□□□ 0.7
SHANK2-202ENST00000357171 RALGAPBQ86X10 1494 aa19.45■□□□□ 0.7
SHANK2-202ENST00000357171 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
SHANK2-202ENST00000357171 CENPJQ9HC77 1338 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-202ENST00000357171 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-202ENST00000357171 TRPM3Q9HCF6 1732 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-202ENST00000357171 CDK19Q9BWU1 502 aa19.41■□□□□ 0.7
SHANK2-202ENST00000357171 KRT28Q7Z3Y7 464 aa19.4■□□□□ 0.7
SHANK2-202ENST00000357171 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
SHANK2-202ENST00000357171 SBNO1A3KN83 1393 aa19.4■□□□□ 0.7
SHANK2-202ENST00000357171 XPCQ01831 940 aaPredicted RBP19.39■□□□□ 0.69
SHANK2-202ENST00000357171 NUDT16Q96DE0 195 aaKnown RBP19.39■□□□□ 0.69
SHANK2-202ENST00000357171 TIMELESSQ9UNS1 1208 aa19.39■□□□□ 0.69
SHANK2-202ENST00000357171 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
SHANK2-202ENST00000357171 ALS2Q96Q42 1657 aa19.38■□□□□ 0.69
SHANK2-202ENST00000357171 SBNO2Q9Y2G9 1366 aa19.37■□□□□ 0.69
SHANK2-202ENST00000357171 PMFBP1Q8TBY8 1022 aa19.37■□□□□ 0.69
SHANK2-202ENST00000357171 TNS3Q68CZ2 1445 aa19.36■□□□□ 0.69
SHANK2-202ENST00000357171 PSME1Q06323 249 aa19.36■□□□□ 0.69
SHANK2-202ENST00000357171 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
SHANK2-202ENST00000357171 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-202ENST00000357171 NUTM2BA6NNL0 878 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-202ENST00000357171 NUTM2EB1AL46 878 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-202ENST00000357171 NUTM2AQ8IVF1 878 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-202ENST00000357171 PLEKHG3A1L390 1219 aa19.34■□□□□ 0.69
SHANK2-202ENST00000357171 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
SHANK2-202ENST00000357171 ABCA3Q99758 1704 aa19.33■□□□□ 0.69
SHANK2-202ENST00000357171 POTEAQ6S8J7 498 aa19.33■□□□□ 0.69
SHANK2-202ENST00000357171 MEX3CQ5U5Q3 659 aaKnown RBP19.32■□□□□ 0.68
SHANK2-202ENST00000357171 ARHGEF10O15013 1369 aa19.31■□□□□ 0.68
SHANK2-202ENST00000357171 EVC2Q86UK5 1308 aa19.31■□□□□ 0.68
SHANK2-202ENST00000357171 CRYBG1Q9Y4K1 1723 aa19.31■□□□□ 0.68
SHANK2-202ENST00000357171 NGDNQ8NEJ9 315 aaKnown RBP19.31■□□□□ 0.68
SHANK2-202ENST00000357171 SRPK2P78362 688 aaKnown RBP19.3■□□□□ 0.68
SHANK2-202ENST00000357171 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
SHANK2-202ENST00000357171 CABP2Q9NPB3 220 aa19.3■□□□□ 0.68
SHANK2-202ENST00000357171 PPIP5K1Q6PFW1 1433 aa19.29■□□□□ 0.68
SHANK2-202ENST00000357171 ACEP12821 1306 aa19.28■□□□□ 0.68
SHANK2-202ENST00000357171 AFF2P51816 1311 aa19.27■□□□□ 0.68
SHANK2-202ENST00000357171 ADAMTS2O95450 1211 aa19.27■□□□□ 0.68
SHANK2-202ENST00000357171 FNBP4Q8N3X1 1017 aaPredicted RBP19.27■□□□□ 0.68
SHANK2-202ENST00000357171 SOCS7O14512 581 aa19.26■□□□□ 0.67
SHANK2-202ENST00000357171 CCER1Q8TC90 406 aaPredicted RBP19.26■□□□□ 0.67
SHANK2-202ENST00000357171 C8orf37Q96NL8 207 aa19.26■□□□□ 0.67
SHANK2-202ENST00000357171 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
SHANK2-202ENST00000357171 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.25■□□□□ 0.67
SHANK2-202ENST00000357171 BRD4O60885 1362 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-202ENST00000357171 TESK2Q96S53 571 aa19.24■□□□□ 0.67
SHANK2-202ENST00000357171 NGLY1Q96IV0 654 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms