RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
ATN1-201ENST00000356654 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
ATN1-201ENST00000356654 RAPGEF4Q8WZA2 1011 aa17.43■□□□□ 0.38
ATN1-201ENST00000356654 C9orf78Q9NZ63 289 aaPredicted RBP17.43■□□□□ 0.38
ATN1-201ENST00000356654 TTC5Q8N0Z6 440 aa17.43■□□□□ 0.38
ATN1-201ENST00000356654 GOLGA6L4A6NEF3 574 aa17.43■□□□□ 0.38
ATN1-201ENST00000356654 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
ATN1-201ENST00000356654 GPATCH3Q96I76 525 aa17.41■□□□□ 0.38
ATN1-201ENST00000356654 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
ATN1-201ENST00000356654 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
ATN1-201ENST00000356654 NOS1P29475 1434 aa17.4■□□□□ 0.38
ATN1-201ENST00000356654 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
ATN1-201ENST00000356654 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
ATN1-201ENST00000356654 DENND4BO75064 1496 aaPredicted RBP17.4■□□□□ 0.38
ATN1-201ENST00000356654 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
ATN1-201ENST00000356654 TWISTNBQ3B726 338 aaPredicted RBP17.39■□□□□ 0.37
ATN1-201ENST00000356654 KIAA0556O60303 1618 aa17.39■□□□□ 0.37
ATN1-201ENST00000356654 WWC1Q8IX03 1113 aa17.39■□□□□ 0.37
ATN1-201ENST00000356654 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
ATN1-201ENST00000356654 GPRASP1Q5JY77 1395 aa17.39■□□□□ 0.37
ATN1-201ENST00000356654 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
ATN1-201ENST00000356654 NEXNQ0ZGT2 675 aa17.38■□□□□ 0.37
ATN1-201ENST00000356654 GBP4Q96PP9 640 aa17.38■□□□□ 0.37
ATN1-201ENST00000356654 XPCQ01831 940 aaPredicted RBP17.38■□□□□ 0.37
ATN1-201ENST00000356654 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
ATN1-201ENST00000356654 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
ATN1-201ENST00000356654 WDR62O43379 1518 aa17.38■□□□□ 0.37
ATN1-201ENST00000356654 DISP1Q96F81 1524 aa17.38■□□□□ 0.37
ATN1-201ENST00000356654 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
ATN1-201ENST00000356654 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
ATN1-201ENST00000356654 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
ATN1-201ENST00000356654 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
ATN1-201ENST00000356654 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
ATN1-201ENST00000356654 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
ATN1-201ENST00000356654 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
ATN1-201ENST00000356654 WDR63Q8IWG1 891 aa17.36■□□□□ 0.37
ATN1-201ENST00000356654 C1orf115Q9H7X2 142 aa17.36■□□□□ 0.37
ATN1-201ENST00000356654 SLFN5Q08AF3 891 aa17.36■□□□□ 0.37
ATN1-201ENST00000356654 NME9Q86XW9 330 aa17.36■□□□□ 0.37
ATN1-201ENST00000356654 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
ATN1-201ENST00000356654 FOXD4L5Q5VV16 416 aaPredicted RBP17.35■□□□□ 0.37
ATN1-201ENST00000356654 GAS2L2Q8NHY3 880 aa17.35■□□□□ 0.37
ATN1-201ENST00000356654 FOXD4L4Q8WXT5 416 aaPredicted RBP17.35■□□□□ 0.37
ATN1-201ENST00000356654 GTF2E1P29083 439 aaPredicted RBP17.35■□□□□ 0.37
ATN1-201ENST00000356654 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
ATN1-201ENST00000356654 TCOF1Q13428 1488 aaKnown RBP17.34■□□□□ 0.37
ATN1-201ENST00000356654 EIF4G3O43432 1585 aaKnown RBP17.34■□□□□ 0.37
ATN1-201ENST00000356654 NUP160Q12769 1436 aa17.33■□□□□ 0.37
ATN1-201ENST00000356654 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.37
ATN1-201ENST00000356654 FCHSD2O94868 740 aa17.33■□□□□ 0.36
ATN1-201ENST00000356654 ST18O60284 1047 aa17.32■□□□□ 0.36
ATN1-201ENST00000356654 FBLN1P23142 703 aa17.32■□□□□ 0.36
ATN1-201ENST00000356654 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
ATN1-201ENST00000356654 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
ATN1-201ENST00000356654 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
ATN1-201ENST00000356654 DDX58O95786 925 aaKnown RBP17.32■□□□□ 0.36
ATN1-201ENST00000356654 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
ATN1-201ENST00000356654 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
ATN1-201ENST00000356654 C20orf194Q5TEA3 1177 aa17.31■□□□□ 0.36
ATN1-201ENST00000356654 AMOTL2Q9Y2J4 779 aa17.31■□□□□ 0.36
ATN1-201ENST00000356654 POGZQ7Z3K3 1410 aa17.31■□□□□ 0.36
ATN1-201ENST00000356654 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
ATN1-201ENST00000356654 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
ATN1-201ENST00000356654 ATF7IPQ6VMQ6 1270 aa17.3■□□□□ 0.36
ATN1-201ENST00000356654 AAMPQ13685 434 aa17.29■□□□□ 0.36
ATN1-201ENST00000356654 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
ATN1-201ENST00000356654 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
ATN1-201ENST00000356654 RIC3Q7Z5B4 369 aa17.29■□□□□ 0.36
ATN1-201ENST00000356654 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
ATN1-201ENST00000356654 FOXD4L6Q3SYB3 417 aaPredicted RBP17.28■□□□□ 0.36
ATN1-201ENST00000356654 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
ATN1-201ENST00000356654 FOXD4L3Q6VB84 417 aaPredicted RBP17.28■□□□□ 0.36
ATN1-201ENST00000356654 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
ATN1-201ENST00000356654 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
ATN1-201ENST00000356654 TESK2Q96S53 571 aa17.28■□□□□ 0.36
ATN1-201ENST00000356654 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
ATN1-201ENST00000356654 IFIT2P09913 472 aaKnown RBP17.27■□□□□ 0.36
ATN1-201ENST00000356654 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
ATN1-201ENST00000356654 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
ATN1-201ENST00000356654 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.36
ATN1-201ENST00000356654 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
ATN1-201ENST00000356654 ANO2Q9NQ90 1003 aa17.27■□□□□ 0.36
ATN1-201ENST00000356654 HSP90B1P14625 803 aaKnown RBP17.27■□□□□ 0.35
ATN1-201ENST00000356654 WDR7Q9Y4E6 1490 aa17.27■□□□□ 0.35
ATN1-201ENST00000356654 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
ATN1-201ENST00000356654 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
ATN1-201ENST00000356654 G3BP1Q13283 466 aaKnown RBP eCLIP17.26■□□□□ 0.35
ATN1-201ENST00000356654 A2MP01023 1474 aa17.26■□□□□ 0.35
ATN1-201ENST00000356654 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
ATN1-201ENST00000356654 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
ATN1-201ENST00000356654 C22orf23Q9BZE7 217 aa17.26■□□□□ 0.35
ATN1-201ENST00000356654 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
ATN1-201ENST00000356654 REC8O95072 547 aa17.25■□□□□ 0.35
ATN1-201ENST00000356654 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
ATN1-201ENST00000356654 FAM135AQ9P2D6 1515 aa17.25■□□□□ 0.35
ATN1-201ENST00000356654 MCM10Q7L590 875 aa17.25■□□□□ 0.35
ATN1-201ENST00000356654 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
ATN1-201ENST00000356654 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
ATN1-201ENST00000356654 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
ATN1-201ENST00000356654 CFAP43Q8NDM7 1665 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms