RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 NFKBIBQ15653 356 aa17.79■□□□□ 0.44
EBF3-201ENST00000355311 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
EBF3-201ENST00000355311 SOX12O15370 315 aa17.78■□□□□ 0.44
EBF3-201ENST00000355311 C8orf34Q49A92 452 aa17.78■□□□□ 0.44
EBF3-201ENST00000355311 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
EBF3-201ENST00000355311 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.44
EBF3-201ENST00000355311 TRPM2O94759 1503 aa17.77■□□□□ 0.44
EBF3-201ENST00000355311 PCDHB15Q9Y5E8 787 aa17.77■□□□□ 0.44
EBF3-201ENST00000355311 NPATQ14207 1427 aa17.77■□□□□ 0.43
EBF3-201ENST00000355311 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
EBF3-201ENST00000355311 CFAP74Q9C0B2 1584 aa17.76■□□□□ 0.43
EBF3-201ENST00000355311 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
EBF3-201ENST00000355311 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
EBF3-201ENST00000355311 MS4A1P11836 297 aa17.75■□□□□ 0.43
EBF3-201ENST00000355311 HMOX1P09601 288 aa17.75■□□□□ 0.43
EBF3-201ENST00000355311 RUNDC1Q96C34 613 aa17.75■□□□□ 0.43
EBF3-201ENST00000355311 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
EBF3-201ENST00000355311 SPHKAPQ2M3C7 1700 aa17.74■□□□□ 0.43
EBF3-201ENST00000355311 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
EBF3-201ENST00000355311 RARSP54136 660 aaKnown RBP17.73■□□□□ 0.43
EBF3-201ENST00000355311 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
EBF3-201ENST00000355311 CGNL1Q0VF96 1302 aa17.73■□□□□ 0.43
EBF3-201ENST00000355311 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
EBF3-201ENST00000355311 TRMT2AQ8IZ69 625 aaKnown RBP17.73■□□□□ 0.43
EBF3-201ENST00000355311 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
EBF3-201ENST00000355311 CFAP53Q96M91 514 aa17.71■□□□□ 0.43
EBF3-201ENST00000355311 NKTRP30414 1462 aaKnown RBP17.71■□□□□ 0.43
EBF3-201ENST00000355311 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
EBF3-201ENST00000355311 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
EBF3-201ENST00000355311 FRAT2O75474 233 aaPredicted RBP17.7■□□□□ 0.42
EBF3-201ENST00000355311 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
EBF3-201ENST00000355311 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
EBF3-201ENST00000355311 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
EBF3-201ENST00000355311 PIK3C2GO75747 1445 aa17.69■□□□□ 0.42
EBF3-201ENST00000355311 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
EBF3-201ENST00000355311 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
EBF3-201ENST00000355311 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
EBF3-201ENST00000355311 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
EBF3-201ENST00000355311 GLI2P10070 1586 aa17.68■□□□□ 0.42
EBF3-201ENST00000355311 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
EBF3-201ENST00000355311 ITPRIPQ8IWB1 547 aa17.68■□□□□ 0.42
EBF3-201ENST00000355311 IQGAP1P46940 1657 aa17.68■□□□□ 0.42
EBF3-201ENST00000355311 CEP152O94986 1710 aa17.67■□□□□ 0.42
EBF3-201ENST00000355311 RIPK4P57078 832 aa17.67■□□□□ 0.42
EBF3-201ENST00000355311 MROH2AA6NES4 1674 aa17.67■□□□□ 0.42
EBF3-201ENST00000355311 RNF17Q9BXT8 1623 aaKnown RBP17.66■□□□□ 0.42
EBF3-201ENST00000355311 FYB1O15117 783 aa17.66■□□□□ 0.42
EBF3-201ENST00000355311 CDK19Q9BWU1 502 aa17.66■□□□□ 0.42
EBF3-201ENST00000355311 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
EBF3-201ENST00000355311 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
EBF3-201ENST00000355311 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
EBF3-201ENST00000355311 PPRC1Q5VV67 1664 aaKnown RBP17.65■□□□□ 0.42
EBF3-201ENST00000355311 C1orf115Q9H7X2 142 aa17.65■□□□□ 0.42
EBF3-201ENST00000355311 MYOM1P52179 1685 aa17.64■□□□□ 0.41
EBF3-201ENST00000355311 TET3O43151 1660 aa17.64■□□□□ 0.41
EBF3-201ENST00000355311 MAP3K4Q9Y6R4 1608 aa17.64■□□□□ 0.41
EBF3-201ENST00000355311 KIDINS220Q9ULH0 1771 aa17.64■□□□□ 0.41
EBF3-201ENST00000355311 SYNMO15061 1565 aa17.63■□□□□ 0.41
EBF3-201ENST00000355311 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
EBF3-201ENST00000355311 ZNF518AQ6AHZ1 1483 aa17.63■□□□□ 0.41
EBF3-201ENST00000355311 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
EBF3-201ENST00000355311 SSH1Q8WYL5 1049 aa17.63■□□□□ 0.41
EBF3-201ENST00000355311 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
EBF3-201ENST00000355311 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
EBF3-201ENST00000355311 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
EBF3-201ENST00000355311 MROH1Q8NDA8 1641 aa17.63■□□□□ 0.41
EBF3-201ENST00000355311 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
EBF3-201ENST00000355311 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
EBF3-201ENST00000355311 NOB1Q9ULX3 412 aaKnown RBP17.62■□□□□ 0.41
EBF3-201ENST00000355311 INSRP06213 1382 aa17.62■□□□□ 0.41
EBF3-201ENST00000355311 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
EBF3-201ENST00000355311 EMILIN1Q9Y6C2 1016 aa17.61■□□□□ 0.41
EBF3-201ENST00000355311 LAMC1P11047 1609 aa17.61■□□□□ 0.41
EBF3-201ENST00000355311 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
EBF3-201ENST00000355311 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
EBF3-201ENST00000355311 POLR3AO14802 1390 aaPredicted RBP17.6■□□□□ 0.41
EBF3-201ENST00000355311 KIF1BO60333 1816 aa17.59■□□□□ 0.41
EBF3-201ENST00000355311 MFAP1P55081 439 aaKnown RBP17.59■□□□□ 0.41
EBF3-201ENST00000355311 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
EBF3-201ENST00000355311 EFCAB6Q5THR3 1501 aa17.59■□□□□ 0.41
EBF3-201ENST00000355311 FAM83GA6ND36 823 aa17.59■□□□□ 0.41
EBF3-201ENST00000355311 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
EBF3-201ENST00000355311 TRIM27P14373 513 aa17.58■□□□□ 0.41
EBF3-201ENST00000355311 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
EBF3-201ENST00000355311 PDE3AQ14432 1141 aa17.58■□□□□ 0.4
EBF3-201ENST00000355311 NME9Q86XW9 330 aa17.58■□□□□ 0.4
EBF3-201ENST00000355311 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.4
EBF3-201ENST00000355311 DIAPH1O60610 1272 aaKnown RBP17.56■□□□□ 0.4
EBF3-201ENST00000355311 TMEM57Q8N5G2 664 aa17.56■□□□□ 0.4
EBF3-201ENST00000355311 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
EBF3-201ENST00000355311 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
EBF3-201ENST00000355311 APBB1O00213 710 aa17.56■□□□□ 0.4
EBF3-201ENST00000355311 POGZQ7Z3K3 1410 aa17.56■□□□□ 0.4
EBF3-201ENST00000355311 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
EBF3-201ENST00000355311 ZKSCAN2Q63HK3 967 aa17.55■□□□□ 0.4
EBF3-201ENST00000355311 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
EBF3-201ENST00000355311 USP19O94966 1318 aa17.55■□□□□ 0.4
EBF3-201ENST00000355311 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
EBF3-201ENST00000355311 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
EBF3-201ENST00000355311 HDGFL2Q7Z4V5 671 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms