RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 WAPLQ7Z5K2 1190 aa16.81■□□□□ 0.28
CDRT1-202ENST00000354433 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
CDRT1-202ENST00000354433 CDC42BPGQ6DT37 1551 aa16.8■□□□□ 0.28
CDRT1-202ENST00000354433 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
CDRT1-202ENST00000354433 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
CDRT1-202ENST00000354433 ABCC11Q96J66 1382 aa16.79■□□□□ 0.28
CDRT1-202ENST00000354433 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
CDRT1-202ENST00000354433 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
CDRT1-202ENST00000354433 PLEKHH1Q9ULM0 1364 aa16.78■□□□□ 0.28
CDRT1-202ENST00000354433 KNDC1Q76NI1 1749 aa16.78■□□□□ 0.28
CDRT1-202ENST00000354433 NUTM2FA1L443 756 aa16.78■□□□□ 0.28
CDRT1-202ENST00000354433 LAMC1P11047 1609 aa16.78■□□□□ 0.28
CDRT1-202ENST00000354433 NRXN1Q9ULB1 1477 aa16.78■□□□□ 0.28
CDRT1-202ENST00000354433 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.28
CDRT1-202ENST00000354433 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
CDRT1-202ENST00000354433 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.28
CDRT1-202ENST00000354433 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.27
CDRT1-202ENST00000354433 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
CDRT1-202ENST00000354433 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
CDRT1-202ENST00000354433 SAFB2Q14151 953 aaKnown RBP eCLIP16.74■□□□□ 0.27
CDRT1-202ENST00000354433 ZNF772Q68DY9 489 aaPredicted RBP16.74■□□□□ 0.27
CDRT1-202ENST00000354433 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
CDRT1-202ENST00000354433 SOS2Q07890 1332 aaPredicted RBP16.72■□□□□ 0.27
CDRT1-202ENST00000354433 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
CDRT1-202ENST00000354433 C8orf37Q96NL8 207 aa16.72■□□□□ 0.27
CDRT1-202ENST00000354433 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
CDRT1-202ENST00000354433 POGKQ9P215 609 aa16.72■□□□□ 0.27
CDRT1-202ENST00000354433 FOXO3O43524 673 aa16.7■□□□□ 0.26
CDRT1-202ENST00000354433 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
CDRT1-202ENST00000354433 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
CDRT1-202ENST00000354433 SIRT1Q96EB6 747 aa16.69■□□□□ 0.26
CDRT1-202ENST00000354433 TRAK1Q9UPV9 953 aa16.69■□□□□ 0.26
CDRT1-202ENST00000354433 AFF2P51816 1311 aa16.69■□□□□ 0.26
CDRT1-202ENST00000354433 FMN2Q9NZ56 1722 aa16.68■□□□□ 0.26
CDRT1-202ENST00000354433 ADGRB1O14514 1584 aa16.68■□□□□ 0.26
CDRT1-202ENST00000354433 DLC1Q96QB1 1528 aa16.68■□□□□ 0.26
CDRT1-202ENST00000354433 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
CDRT1-202ENST00000354433 PXDNQ92626 1479 aa16.65■□□□□ 0.26
CDRT1-202ENST00000354433 KIF1AQ12756 1690 aa16.65■□□□□ 0.26
CDRT1-202ENST00000354433 NGLY1Q96IV0 654 aa16.64■□□□□ 0.25
CDRT1-202ENST00000354433 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
CDRT1-202ENST00000354433 RXRBP28702 533 aa16.64■□□□□ 0.25
CDRT1-202ENST00000354433 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
CDRT1-202ENST00000354433 PHF8Q9UPP1 1060 aa16.63■□□□□ 0.25
CDRT1-202ENST00000354433 COL22A1Q8NFW1 1626 aaPredicted RBP16.61■□□□□ 0.25
CDRT1-202ENST00000354433 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
CDRT1-202ENST00000354433 ADGRB2O60241 1585 aa16.61■□□□□ 0.25
CDRT1-202ENST00000354433 EIF3AQ14152 1382 aaKnown RBP16.6■□□□□ 0.25
CDRT1-202ENST00000354433 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
CDRT1-202ENST00000354433 PMFBP1Q8TBY8 1022 aa16.6■□□□□ 0.25
CDRT1-202ENST00000354433 ANKARQ7Z5J8 1434 aa16.59■□□□□ 0.25
CDRT1-202ENST00000354433 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
CDRT1-202ENST00000354433 HAP1P54257 671 aaPredicted RBP16.59■□□□□ 0.25
CDRT1-202ENST00000354433 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
CDRT1-202ENST00000354433 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
CDRT1-202ENST00000354433 USP21Q9UK80 565 aa16.59■□□□□ 0.25
CDRT1-202ENST00000354433 PSME1Q06323 249 aa16.58■□□□□ 0.24
CDRT1-202ENST00000354433 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
CDRT1-202ENST00000354433 TNS3Q68CZ2 1445 aa16.57■□□□□ 0.24
CDRT1-202ENST00000354433 RBM6P78332 1123 aaKnown RBP16.56■□□□□ 0.24
CDRT1-202ENST00000354433 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
CDRT1-202ENST00000354433 ARHGEF28Q8N1W1 1705 aaKnown RBP16.56■□□□□ 0.24
CDRT1-202ENST00000354433 TULP4Q9NRJ4 1543 aa16.55■□□□□ 0.24
CDRT1-202ENST00000354433 WASLO00401 505 aaPredicted RBP16.55■□□□□ 0.24
CDRT1-202ENST00000354433 USP32Q8NFA0 1604 aa16.55■□□□□ 0.24
CDRT1-202ENST00000354433 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
CDRT1-202ENST00000354433 TRPC5Q9UL62 973 aaPredicted RBP16.54■□□□□ 0.24
CDRT1-202ENST00000354433 RGS12O14924 1447 aa16.54■□□□□ 0.24
CDRT1-202ENST00000354433 NEUROD1Q13562 356 aa16.53■□□□□ 0.24
CDRT1-202ENST00000354433 FNBP4Q8N3X1 1017 aaPredicted RBP16.53■□□□□ 0.24
CDRT1-202ENST00000354433 PRR36Q9H6K5 1346 aa16.53■□□□□ 0.24
CDRT1-202ENST00000354433 GPRASP1Q5JY77 1395 aa16.53■□□□□ 0.24
CDRT1-202ENST00000354433 NGDNQ8NEJ9 315 aaKnown RBP16.52■□□□□ 0.24
CDRT1-202ENST00000354433 SBNO1A3KN83 1393 aa16.52■□□□□ 0.24
CDRT1-202ENST00000354433 ARHGEF10O15013 1369 aa16.52■□□□□ 0.24
CDRT1-202ENST00000354433 KIAA1210Q9ULL0 1709 aa16.52■□□□□ 0.24
CDRT1-202ENST00000354433 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
CDRT1-202ENST00000354433 SIN3AQ96ST3 1273 aa16.51■□□□□ 0.23
CDRT1-202ENST00000354433 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
CDRT1-202ENST00000354433 L3MBTL2Q969R5 705 aa16.51■□□□□ 0.23
CDRT1-202ENST00000354433 ATP7BP35670 1465 aa16.49■□□□□ 0.23
CDRT1-202ENST00000354433 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
CDRT1-202ENST00000354433 ATRNO75882 1429 aa16.49■□□□□ 0.23
CDRT1-202ENST00000354433 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
CDRT1-202ENST00000354433 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
CDRT1-202ENST00000354433 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
CDRT1-202ENST00000354433 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
CDRT1-202ENST00000354433 CENPJQ9HC77 1338 aaPredicted RBP16.47■□□□□ 0.23
CDRT1-202ENST00000354433 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
CDRT1-202ENST00000354433 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDRT1-202ENST00000354433 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
CDRT1-202ENST00000354433 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
CDRT1-202ENST00000354433 SLIT2O94813 1529 aa16.45■□□□□ 0.22
CDRT1-202ENST00000354433 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
CDRT1-202ENST00000354433 ABCA3Q99758 1704 aa16.44■□□□□ 0.22
CDRT1-202ENST00000354433 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
CDRT1-202ENST00000354433 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
CDRT1-202ENST00000354433 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
CDRT1-202ENST00000354433 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
CDRT1-202ENST00000354433 ATAD2Q6PL18 1390 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms