RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 NEUROD2Q15784 382 aa15.67■□□□□ 0.1
DDX4-201ENST00000353507 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
DDX4-201ENST00000353507 GGT6Q6P531 493 aa15.66■□□□□ 0.1
DDX4-201ENST00000353507 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
DDX4-201ENST00000353507 RUNDC1Q96C34 613 aa15.66■□□□□ 0.1
DDX4-201ENST00000353507 C14orf93Q9H972 538 aaKnown RBP15.66■□□□□ 0.1
DDX4-201ENST00000353507 SLC4A3P48751 1232 aa15.65■□□□□ 0.1
DDX4-201ENST00000353507 USP32Q8NFA0 1604 aa15.65■□□□□ 0.1
DDX4-201ENST00000353507 ADGRB1O14514 1584 aa15.65■□□□□ 0.1
DDX4-201ENST00000353507 TMEM132EQ6IEE7 984 aa15.64■□□□□ 0.09
DDX4-201ENST00000353507 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
DDX4-201ENST00000353507 CFAP53Q96M91 514 aa15.64■□□□□ 0.09
DDX4-201ENST00000353507 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
DDX4-201ENST00000353507 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
DDX4-201ENST00000353507 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
DDX4-201ENST00000353507 COG6Q9Y2V7 657 aa15.64■□□□□ 0.09
DDX4-201ENST00000353507 POGZQ7Z3K3 1410 aa15.64■□□□□ 0.09
DDX4-201ENST00000353507 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
DDX4-201ENST00000353507 RPGRIP1LQ68CZ1 1315 aa15.63■□□□□ 0.09
DDX4-201ENST00000353507 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
DDX4-201ENST00000353507 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
DDX4-201ENST00000353507 IQSEC2Q5JU85 1478 aa15.63■□□□□ 0.09
DDX4-201ENST00000353507 IGHDP01880 384 aa15.63■□□□□ 0.09
DDX4-201ENST00000353507 TCP11L2Q8N4U5 519 aa15.63■□□□□ 0.09
DDX4-201ENST00000353507 GLI2P10070 1586 aa15.62■□□□□ 0.09
DDX4-201ENST00000353507 MAPK8IP3Q9UPT6 1336 aa15.62■□□□□ 0.09
DDX4-201ENST00000353507 MLH3Q9UHC1 1453 aa15.61■□□□□ 0.09
DDX4-201ENST00000353507 MTHFSP49914 203 aa15.61■□□□□ 0.09
DDX4-201ENST00000353507 ABCC3O15438 1527 aa15.61■□□□□ 0.09
DDX4-201ENST00000353507 CD109Q6YHK3 1445 aa15.61■□□□□ 0.09
DDX4-201ENST00000353507 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
DDX4-201ENST00000353507 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
DDX4-201ENST00000353507 CAMSAP1Q5T5Y3 1602 aa15.6■□□□□ 0.09
DDX4-201ENST00000353507 ARHGEF28Q8N1W1 1705 aaKnown RBP15.59■□□□□ 0.09
DDX4-201ENST00000353507 WDR63Q8IWG1 891 aa15.59■□□□□ 0.09
DDX4-201ENST00000353507 RARSP54136 660 aaKnown RBP15.59■□□□□ 0.09
DDX4-201ENST00000353507 NSD2O96028 1365 aa15.58■□□□□ 0.08
DDX4-201ENST00000353507 ANKRD36BQ8N2N9 1353 aa15.58■□□□□ 0.08
DDX4-201ENST00000353507 PMFBP1Q8TBY8 1022 aa15.58■□□□□ 0.08
DDX4-201ENST00000353507 AAMPQ13685 434 aa15.57■□□□□ 0.08
DDX4-201ENST00000353507 NUTM2DQ5VT03 806 aaPredicted RBP15.57■□□□□ 0.08
DDX4-201ENST00000353507 TULP4Q9NRJ4 1543 aa15.57■□□□□ 0.08
DDX4-201ENST00000353507 VGFO15240 615 aaPredicted RBP15.56■□□□□ 0.08
DDX4-201ENST00000353507 CCDC27Q2M243 656 aa15.56■□□□□ 0.08
DDX4-201ENST00000353507 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
DDX4-201ENST00000353507 MYH16Q9H6N6 1097 aa15.56■□□□□ 0.08
DDX4-201ENST00000353507 SIGLEC1Q9BZZ2 1709 aa15.56■□□□□ 0.08
DDX4-201ENST00000353507 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
DDX4-201ENST00000353507 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDX4-201ENST00000353507 BCL2L13Q9BXK5 485 aa15.56■□□□□ 0.08
DDX4-201ENST00000353507 PUS7Q96PZ0 661 aaKnown RBP15.55■□□□□ 0.08
DDX4-201ENST00000353507 NEXMIFQ5QGS0 1516 aa15.55■□□□□ 0.08
DDX4-201ENST00000353507 PIK3C2BO00750 1634 aa15.54■□□□□ 0.08
DDX4-201ENST00000353507 GSE1Q14687 1217 aa15.53■□□□□ 0.08
DDX4-201ENST00000353507 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
DDX4-201ENST00000353507 SAFB2Q14151 953 aaKnown RBP eCLIP15.53■□□□□ 0.08
DDX4-201ENST00000353507 RLBP1P12271 317 aa15.52■□□□□ 0.08
DDX4-201ENST00000353507 ADGRB2O60241 1585 aa15.52■□□□□ 0.07
DDX4-201ENST00000353507 TNNQ9UQP3 1299 aa15.52■□□□□ 0.07
DDX4-201ENST00000353507 BECN1Q14457 450 aa15.51■□□□□ 0.07
DDX4-201ENST00000353507 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
DDX4-201ENST00000353507 SRPK2P78362 688 aaKnown RBP15.5■□□□□ 0.07
DDX4-201ENST00000353507 FTSJ3Q8IY81 847 aaKnown RBP15.5■□□□□ 0.07
DDX4-201ENST00000353507 RWDD1Q9H446 243 aaPredicted RBP15.5■□□□□ 0.07
DDX4-201ENST00000353507 UPF2Q9HAU5 1272 aaKnown RBP15.5■□□□□ 0.07
DDX4-201ENST00000353507 PCDHB15Q9Y5E8 787 aa15.5■□□□□ 0.07
DDX4-201ENST00000353507 USP19O94966 1318 aa15.5■□□□□ 0.07
DDX4-201ENST00000353507 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
DDX4-201ENST00000353507 A0A1W2PP64 1363 aa15.49■□□□□ 0.07
DDX4-201ENST00000353507 IL27Q8NEV9 243 aa15.49■□□□□ 0.07
DDX4-201ENST00000353507 DIP2CQ9Y2E4 1556 aa15.49■□□□□ 0.07
DDX4-201ENST00000353507 SEC24BO95487 1268 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 STK26Q9P289 416 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 ABCC11Q96J66 1382 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 NEO1Q92859 1461 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 RAPGEF3O95398 923 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 MVPQ14764 893 aaKnown RBP15.48■□□□□ 0.07
DDX4-201ENST00000353507 PDZRN3Q9UPQ7 1066 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 ZMYM3Q14202 1370 aa15.48■□□□□ 0.07
DDX4-201ENST00000353507 FRAT2O75474 233 aaPredicted RBP15.47■□□□□ 0.07
DDX4-201ENST00000353507 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
DDX4-201ENST00000353507 MYO5BQ9ULV0 1848 aa15.47■□□□□ 0.07
DDX4-201ENST00000353507 CT47B1P0C2W7 299 aaPredicted RBP15.47■□□□□ 0.07
DDX4-201ENST00000353507 GGNBP2Q9H3C7 697 aa15.47■□□□□ 0.07
DDX4-201ENST00000353507 ARHGAP31Q2M1Z3 1444 aa15.46■□□□□ 0.07
DDX4-201ENST00000353507 DZIP1LQ8IYY4 767 aaKnown RBP15.46■□□□□ 0.07
DDX4-201ENST00000353507 TSR2Q969E8 191 aaKnown RBP15.46■□□□□ 0.07
DDX4-201ENST00000353507 ANKRD26Q9UPS8 1709 aa15.46■□□□□ 0.07
DDX4-201ENST00000353507 IDI1Q13907 227 aa15.46■□□□□ 0.06
DDX4-201ENST00000353507 SMC4Q9NTJ3 1288 aa15.46■□□□□ 0.06
DDX4-201ENST00000353507 NLRP1Q9C000 1473 aa15.45■□□□□ 0.06
DDX4-201ENST00000353507 ATAD2Q6PL18 1390 aa15.45■□□□□ 0.06
DDX4-201ENST00000353507 ZFYVE9O95405 1425 aa15.45■□□□□ 0.06
DDX4-201ENST00000353507 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
DDX4-201ENST00000353507 TERF2IPQ9NYB0 399 aa15.45■□□□□ 0.06
DDX4-201ENST00000353507 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
DDX4-201ENST00000353507 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
DDX4-201ENST00000353507 EXOSC9Q06265 439 aaKnown RBP15.43■□□□□ 0.06
DDX4-201ENST00000353507 POGKQ9P215 609 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms