RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 FAM69CQ0P6D2 419 aa19.12■□□□□ 0.65
TRAF3-202ENST00000351691 NAP1L5Q96NT1 182 aaPredicted RBP19.12■□□□□ 0.65
TRAF3-202ENST00000351691 ZMYND15Q9H091 742 aa19.11■□□□□ 0.65
TRAF3-202ENST00000351691 KDM5AP29375 1690 aaKnown RBP19.11■□□□□ 0.65
TRAF3-202ENST00000351691 IFT172Q9UG01 1749 aa19.11■□□□□ 0.65
TRAF3-202ENST00000351691 NKTRP30414 1462 aaKnown RBP19.11■□□□□ 0.65
TRAF3-202ENST00000351691 ZNF518AQ6AHZ1 1483 aa19.11■□□□□ 0.65
TRAF3-202ENST00000351691 ISY1Q9ULR0 285 aaKnown RBP19.1■□□□□ 0.65
TRAF3-202ENST00000351691 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
TRAF3-202ENST00000351691 PIK3C2GO75747 1445 aa19.1■□□□□ 0.65
TRAF3-202ENST00000351691 RICTORQ6R327 1708 aa19.1■□□□□ 0.65
TRAF3-202ENST00000351691 MYOM1P52179 1685 aa19.1■□□□□ 0.65
TRAF3-202ENST00000351691 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
TRAF3-202ENST00000351691 AMER1Q5JTC6 1135 aaPredicted RBP19.09■□□□□ 0.65
TRAF3-202ENST00000351691 AAMPQ13685 434 aa19.08■□□□□ 0.65
TRAF3-202ENST00000351691 PDE3AQ14432 1141 aa19.08■□□□□ 0.65
TRAF3-202ENST00000351691 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.65
TRAF3-202ENST00000351691 NEO1Q92859 1461 aa19.08■□□□□ 0.64
TRAF3-202ENST00000351691 HECW2Q9P2P5 1572 aa19.08■□□□□ 0.64
TRAF3-202ENST00000351691 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
TRAF3-202ENST00000351691 WDR43Q15061 677 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRAF3-202ENST00000351691 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
TRAF3-202ENST00000351691 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
TRAF3-202ENST00000351691 NRXN1Q9ULB1 1477 aa19.07■□□□□ 0.64
TRAF3-202ENST00000351691 MRE11P49959 708 aa19.06■□□□□ 0.64
TRAF3-202ENST00000351691 TBC1D32Q96NH3 1257 aa19.06■□□□□ 0.64
TRAF3-202ENST00000351691 UPF2Q9HAU5 1272 aaKnown RBP19.06■□□□□ 0.64
TRAF3-202ENST00000351691 MYO3AQ8NEV4 1616 aa19.06■□□□□ 0.64
TRAF3-202ENST00000351691 MCM4P33991 863 aa19.05■□□□□ 0.64
TRAF3-202ENST00000351691 SLKQ9H2G2 1235 aaPredicted RBP19.05■□□□□ 0.64
TRAF3-202ENST00000351691 RAPGEF3O95398 923 aa19.04■□□□□ 0.64
TRAF3-202ENST00000351691 SEC24BO95487 1268 aa19.04■□□□□ 0.64
TRAF3-202ENST00000351691 IGHDP01880 384 aa19.04■□□□□ 0.64
TRAF3-202ENST00000351691 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
TRAF3-202ENST00000351691 FRMPD1Q5SYB0 1578 aa19.03■□□□□ 0.64
TRAF3-202ENST00000351691 SETBP1Q9Y6X0 1596 aa19.03■□□□□ 0.64
TRAF3-202ENST00000351691 ADGRB3O60242 1522 aa19.02■□□□□ 0.63
TRAF3-202ENST00000351691 TBC1D2Q9BYX2 928 aa19.01■□□□□ 0.63
TRAF3-202ENST00000351691 CENPJQ9HC77 1338 aaPredicted RBP19.01■□□□□ 0.63
TRAF3-202ENST00000351691 MLH3Q9UHC1 1453 aa19.01■□□□□ 0.63
TRAF3-202ENST00000351691 E9PSI1 815 aa19.01■□□□□ 0.63
TRAF3-202ENST00000351691 ERVK-7P63135 1459 aa19.01■□□□□ 0.63
TRAF3-202ENST00000351691 MROH2AA6NES4 1674 aa19■□□□□ 0.63
TRAF3-202ENST00000351691 CLUAP1Q96AJ1 413 aa19■□□□□ 0.63
TRAF3-202ENST00000351691 TPM2P07951 284 aa19■□□□□ 0.63
TRAF3-202ENST00000351691 UGGT1Q9NYU2 1555 aa18.99■□□□□ 0.63
TRAF3-202ENST00000351691 CHMP5Q9NZZ3 219 aa18.99■□□□□ 0.63
TRAF3-202ENST00000351691 CFAP70Q5T0N1 1121 aa18.98■□□□□ 0.63
TRAF3-202ENST00000351691 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
TRAF3-202ENST00000351691 PMFBP1Q8TBY8 1022 aa18.98■□□□□ 0.63
TRAF3-202ENST00000351691 DIP2CQ9Y2E4 1556 aa18.97■□□□□ 0.63
TRAF3-202ENST00000351691 ESPNB1AK53 854 aa18.97■□□□□ 0.63
TRAF3-202ENST00000351691 PANK2Q9BZ23 570 aa18.97■□□□□ 0.63
TRAF3-202ENST00000351691 RPGRIP1LQ68CZ1 1315 aa18.96■□□□□ 0.63
TRAF3-202ENST00000351691 TRAK2O60296 914 aa18.96■□□□□ 0.63
TRAF3-202ENST00000351691 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
TRAF3-202ENST00000351691 PPLO60437 1756 aa18.95■□□□□ 0.62
TRAF3-202ENST00000351691 DDX11L8A8MPP1 907 aa18.95■□□□□ 0.62
TRAF3-202ENST00000351691 BCAR3O75815 825 aa18.95■□□□□ 0.62
TRAF3-202ENST00000351691 GRPEL1Q9HAV7 217 aa18.94■□□□□ 0.62
TRAF3-202ENST00000351691 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
TRAF3-202ENST00000351691 YEATS2Q9ULM3 1422 aa18.93■□□□□ 0.62
TRAF3-202ENST00000351691 NOS1P29475 1434 aa18.92■□□□□ 0.62
TRAF3-202ENST00000351691 PDCL3Q9H2J4 239 aa18.92■□□□□ 0.62
TRAF3-202ENST00000351691 ZC3H13Q5T200 1668 aaKnown RBP18.92■□□□□ 0.62
TRAF3-202ENST00000351691 NPATQ14207 1427 aa18.91■□□□□ 0.62
TRAF3-202ENST00000351691 C14orf93Q9H972 538 aaKnown RBP18.9■□□□□ 0.62
TRAF3-202ENST00000351691 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
TRAF3-202ENST00000351691 ABCC3O15438 1527 aa18.89■□□□□ 0.61
TRAF3-202ENST00000351691 PTMSP20962 102 aa18.89■□□□□ 0.61
TRAF3-202ENST00000351691 PUS7Q96PZ0 661 aaKnown RBP18.88■□□□□ 0.61
TRAF3-202ENST00000351691 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
TRAF3-202ENST00000351691 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
TRAF3-202ENST00000351691 ADGRB1O14514 1584 aa18.87■□□□□ 0.61
TRAF3-202ENST00000351691 USP32Q8NFA0 1604 aa18.87■□□□□ 0.61
TRAF3-202ENST00000351691 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
TRAF3-202ENST00000351691 QRICH2Q9H0J4 1663 aa18.87■□□□□ 0.61
TRAF3-202ENST00000351691 TERF1P54274 439 aa18.86■□□□□ 0.61
TRAF3-202ENST00000351691 CARD14Q9BXL6 1004 aa18.86■□□□□ 0.61
TRAF3-202ENST00000351691 GZF1Q9H116 711 aaPredicted RBP18.86■□□□□ 0.61
TRAF3-202ENST00000351691 APAF1O14727 1248 aa18.86■□□□□ 0.61
TRAF3-202ENST00000351691 TRIM44Q96DX7 344 aaPredicted RBP18.86■□□□□ 0.61
TRAF3-202ENST00000351691 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
TRAF3-202ENST00000351691 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
TRAF3-202ENST00000351691 SIGLEC1Q9BZZ2 1709 aa18.85■□□□□ 0.61
TRAF3-202ENST00000351691 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
TRAF3-202ENST00000351691 ZNF692Q9BU19 519 aaPredicted RBP18.85■□□□□ 0.61
TRAF3-202ENST00000351691 RWDD1Q9H446 243 aaPredicted RBP18.85■□□□□ 0.61
TRAF3-202ENST00000351691 PDZRN3Q9UPQ7 1066 aa18.85■□□□□ 0.61
TRAF3-202ENST00000351691 SKOR2Q2VWA4 1001 aaPredicted RBP18.84■□□□□ 0.61
TRAF3-202ENST00000351691 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
TRAF3-202ENST00000351691 DDIT3P35638 169 aa18.84■□□□□ 0.61
TRAF3-202ENST00000351691 CIZ1Q9ULV3 898 aaPredicted RBP18.84■□□□□ 0.61
TRAF3-202ENST00000351691 PANK1Q8TE04 598 aa18.83■□□□□ 0.6
TRAF3-202ENST00000351691 C22orf23Q9BZE7 217 aa18.83■□□□□ 0.6
TRAF3-202ENST00000351691 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.6
TRAF3-202ENST00000351691 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
TRAF3-202ENST00000351691 GGT6Q6P531 493 aa18.82■□□□□ 0.6
TRAF3-202ENST00000351691 ARXQ96QS3 562 aa18.82■□□□□ 0.6
TRAF3-202ENST00000351691 CHGAP10645 457 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms