RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 TMEM132AQ24JP5 1023 aa12.58□□□□□ -0.4
UBE2D3-204ENST00000349311 NR1I2O75469 434 aa12.57□□□□□ -0.4
UBE2D3-204ENST00000349311 FDX1P10109 184 aa12.57□□□□□ -0.4
UBE2D3-204ENST00000349311 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
UBE2D3-204ENST00000349311 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-204ENST00000349311 COPS2P61201 443 aa12.56□□□□□ -0.4
UBE2D3-204ENST00000349311 BRICD5Q6PL45 260 aa12.56□□□□□ -0.4
UBE2D3-204ENST00000349311 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
UBE2D3-204ENST00000349311 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
UBE2D3-204ENST00000349311 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-204ENST00000349311 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
UBE2D3-204ENST00000349311 PROCA1Q8NCQ7 364 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-204ENST00000349311 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
UBE2D3-204ENST00000349311 LILRB3O75022 631 aa12.52□□□□□ -0.41
UBE2D3-204ENST00000349311 KCNC4Q03721 635 aa12.52□□□□□ -0.41
UBE2D3-204ENST00000349311 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-204ENST00000349311 Q3C1V9 767 aa12.51□□□□□ -0.41
UBE2D3-204ENST00000349311 PPP2R2DQ66LE6 453 aa12.51□□□□□ -0.41
UBE2D3-204ENST00000349311 UNC13AQ9UPW8 1703 aa12.49□□□□□ -0.41
UBE2D3-204ENST00000349311 FMNL1O95466 1100 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-204ENST00000349311 MYT1Q01538 1121 aa12.49□□□□□ -0.41
UBE2D3-204ENST00000349311 QPCTQ16769 361 aa12.48□□□□□ -0.41
UBE2D3-204ENST00000349311 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-204ENST00000349311 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
UBE2D3-204ENST00000349311 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
UBE2D3-204ENST00000349311 TLL1O43897 1013 aa12.47□□□□□ -0.41
UBE2D3-204ENST00000349311 ADH1BP00325 375 aa12.47□□□□□ -0.41
UBE2D3-204ENST00000349311 MTMR2Q13614 643 aa12.47□□□□□ -0.41
UBE2D3-204ENST00000349311 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-204ENST00000349311 SPSB2Q99619 263 aa12.47□□□□□ -0.41
UBE2D3-204ENST00000349311 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
UBE2D3-204ENST00000349311 MSS51Q4VC12 460 aa12.46□□□□□ -0.41
UBE2D3-204ENST00000349311 RETREG3Q86VR2 466 aa12.46□□□□□ -0.41
UBE2D3-204ENST00000349311 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-204ENST00000349311 ZBTB3Q9H5J0 574 aa12.46□□□□□ -0.41
UBE2D3-204ENST00000349311 USB1Q9BQ65 265 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-204ENST00000349311 SHROOM4Q9ULL8 1493 aa12.45□□□□□ -0.42
UBE2D3-204ENST00000349311 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
UBE2D3-204ENST00000349311 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-204ENST00000349311 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
UBE2D3-204ENST00000349311 DESI1Q6ICB0 168 aa12.42□□□□□ -0.42
UBE2D3-204ENST00000349311 C6orf229H3BNL8 230 aa12.41□□□□□ -0.42
UBE2D3-204ENST00000349311 MMP16P51512 607 aa12.41□□□□□ -0.42
UBE2D3-204ENST00000349311 CFAP99D6REC4 459 aa12.4□□□□□ -0.42
UBE2D3-204ENST00000349311 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
UBE2D3-204ENST00000349311 DXOO77932 396 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-204ENST00000349311 RFC5P40937 340 aa12.38□□□□□ -0.43
UBE2D3-204ENST00000349311 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
UBE2D3-204ENST00000349311 SLC6A16Q9GZN6 736 aa12.38□□□□□ -0.43
UBE2D3-204ENST00000349311 PRDM9Q9NQV7 894 aa12.36□□□□□ -0.43
UBE2D3-204ENST00000349311 S1PR4O95977 384 aa12.35□□□□□ -0.43
UBE2D3-204ENST00000349311 JUNDP17535 347 aa12.35□□□□□ -0.43
UBE2D3-204ENST00000349311 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
UBE2D3-204ENST00000349311 A0A0G2JS52 829 aa12.34□□□□□ -0.43
UBE2D3-204ENST00000349311 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-204ENST00000349311 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-204ENST00000349311 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-204ENST00000349311 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-204ENST00000349311 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-204ENST00000349311 RNF223E7ERA6 249 aa12.31□□□□□ -0.44
UBE2D3-204ENST00000349311 LYPD8Q6UX82 237 aa12.31□□□□□ -0.44
UBE2D3-204ENST00000349311 TMEM259Q4ZIN3 620 aa12.3□□□□□ -0.44
UBE2D3-204ENST00000349311 ANKLE1Q8NAG6 615 aa12.3□□□□□ -0.44
UBE2D3-204ENST00000349311 PTPRNQ16849 979 aa12.29□□□□□ -0.44
UBE2D3-204ENST00000349311 BANK1Q8NDB2 785 aa12.29□□□□□ -0.44
UBE2D3-204ENST00000349311 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-204ENST00000349311 CTDSPL2Q05D32 466 aa12.28□□□□□ -0.44
UBE2D3-204ENST00000349311 GGCXP38435 758 aa12.27□□□□□ -0.45
UBE2D3-204ENST00000349311 SOCS7O14512 581 aa12.26□□□□□ -0.45
UBE2D3-204ENST00000349311 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-204ENST00000349311 F12P00748 615 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-204ENST00000349311 EMID1Q96A84 441 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-204ENST00000349311 HELBQ8NG08 1087 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-204ENST00000349311 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
UBE2D3-204ENST00000349311 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
UBE2D3-204ENST00000349311 PLA2G2CQ5R387 149 aa12.24□□□□□ -0.45
UBE2D3-204ENST00000349311 ATP1B4Q9UN42 357 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-204ENST00000349311 NUDT12Q9BQG2 462 aa12.23□□□□□ -0.45
UBE2D3-204ENST00000349311 FCF1Q9Y324 198 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-204ENST00000349311 AP1G2O75843 785 aa12.22□□□□□ -0.45
UBE2D3-204ENST00000349311 USP17L8P0C7I0 530 aa12.22□□□□□ -0.45
UBE2D3-204ENST00000349311 CCNYL3P0C7X3 344 aa12.22□□□□□ -0.45
UBE2D3-204ENST00000349311 KCNH2Q12809 1159 aa12.2□□□□□ -0.46
UBE2D3-204ENST00000349311 LRRN4Q8WUT4 740 aa12.2□□□□□ -0.46
UBE2D3-204ENST00000349311 PTCRAQ6ISU1 281 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-204ENST00000349311 TSC1Q92574 1164 aa12.18□□□□□ -0.46
UBE2D3-204ENST00000349311 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-204ENST00000349311 HMX1Q9NP08 348 aaPredicted RBP12.18□□□□□ -0.46
UBE2D3-204ENST00000349311 SNRKQ9NRH2 765 aa12.17□□□□□ -0.46
UBE2D3-204ENST00000349311 RGS20O76081 388 aa12.16□□□□□ -0.46
UBE2D3-204ENST00000349311 LIAT1Q6ZQX7 453 aa12.16□□□□□ -0.46
UBE2D3-204ENST00000349311 MTMR14Q8NCE2 650 aa12.16□□□□□ -0.46
UBE2D3-204ENST00000349311 TRIM34Q9BYJ4 488 aa12.16□□□□□ -0.46
UBE2D3-204ENST00000349311 RPIAP49247 311 aa12.15□□□□□ -0.46
UBE2D3-204ENST00000349311 MAP10Q9P2G4 905 aa12.15□□□□□ -0.46
UBE2D3-204ENST00000349311 MCM6Q14566 821 aa12.14□□□□□ -0.47
UBE2D3-204ENST00000349311 V9GY48 417 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-204ENST00000349311 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
UBE2D3-204ENST00000349311 EPS8L1Q8TE68 723 aa12.12□□□□□ -0.47
UBE2D3-204ENST00000349311 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms