RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 SPATA31A6Q5VVP1 1343 aa19.54■□□□□ 0.72
CLCC1-202ENST00000348264 CFAP70Q5T0N1 1121 aa19.54■□□□□ 0.72
CLCC1-202ENST00000348264 WAPLQ7Z5K2 1190 aa19.54■□□□□ 0.72
CLCC1-202ENST00000348264 FMN2Q9NZ56 1722 aa19.52■□□□□ 0.72
CLCC1-202ENST00000348264 ORAI2Q96SN7 254 aa19.52■□□□□ 0.72
CLCC1-202ENST00000348264 ADGRB1O14514 1584 aa19.52■□□□□ 0.71
CLCC1-202ENST00000348264 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
CLCC1-202ENST00000348264 PNPLA6Q8IY17 1366 aa19.49■□□□□ 0.71
CLCC1-202ENST00000348264 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
CLCC1-202ENST00000348264 DLC1Q96QB1 1528 aa19.48■□□□□ 0.71
CLCC1-202ENST00000348264 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
CLCC1-202ENST00000348264 LRRC59Q96AG4 307 aaKnown RBP19.47■□□□□ 0.71
CLCC1-202ENST00000348264 SOS2Q07890 1332 aaPredicted RBP19.47■□□□□ 0.71
CLCC1-202ENST00000348264 MEX3CQ5U5Q3 659 aaKnown RBP19.46■□□□□ 0.71
CLCC1-202ENST00000348264 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
CLCC1-202ENST00000348264 RGPD8O14715 1765 aaPredicted RBP19.45■□□□□ 0.7
CLCC1-202ENST00000348264 NUTM2BA6NNL0 878 aaPredicted RBP19.45■□□□□ 0.7
CLCC1-202ENST00000348264 NUTM2EB1AL46 878 aaPredicted RBP19.45■□□□□ 0.7
CLCC1-202ENST00000348264 NUTM2AQ8IVF1 878 aaPredicted RBP19.45■□□□□ 0.7
CLCC1-202ENST00000348264 SIRT1Q96EB6 747 aa19.45■□□□□ 0.7
CLCC1-202ENST00000348264 PXDNQ92626 1479 aa19.44■□□□□ 0.7
CLCC1-202ENST00000348264 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
CLCC1-202ENST00000348264 ESCO1Q5FWF5 840 aa19.44■□□□□ 0.7
CLCC1-202ENST00000348264 PRAM1Q96QH2 718 aa19.43■□□□□ 0.7
CLCC1-202ENST00000348264 ADGRB2O60241 1585 aa19.43■□□□□ 0.7
CLCC1-202ENST00000348264 KIF1AQ12756 1690 aa19.43■□□□□ 0.7
CLCC1-202ENST00000348264 COL22A1Q8NFW1 1626 aaPredicted RBP19.41■□□□□ 0.7
CLCC1-202ENST00000348264 SAFB2Q14151 953 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLCC1-202ENST00000348264 ARHGEF28Q8N1W1 1705 aaKnown RBP19.4■□□□□ 0.7
CLCC1-202ENST00000348264 NPHP3Q7Z494 1330 aa19.4■□□□□ 0.7
CLCC1-202ENST00000348264 USP32Q8NFA0 1604 aa19.4■□□□□ 0.7
CLCC1-202ENST00000348264 STAC3Q96MF2 364 aa19.39■□□□□ 0.69
CLCC1-202ENST00000348264 FOXO3O43524 673 aa19.38■□□□□ 0.69
CLCC1-202ENST00000348264 XPCQ01831 940 aaPredicted RBP19.38■□□□□ 0.69
CLCC1-202ENST00000348264 TRAK1Q9UPV9 953 aa19.38■□□□□ 0.69
CLCC1-202ENST00000348264 KIAA1210Q9ULL0 1709 aa19.37■□□□□ 0.69
CLCC1-202ENST00000348264 ZNF772Q68DY9 489 aaPredicted RBP19.37■□□□□ 0.69
CLCC1-202ENST00000348264 AFF2P51816 1311 aa19.36■□□□□ 0.69
CLCC1-202ENST00000348264 POGKQ9P215 609 aa19.36■□□□□ 0.69
CLCC1-202ENST00000348264 C8orf37Q96NL8 207 aa19.34■□□□□ 0.69
CLCC1-202ENST00000348264 ADAMTS2O95450 1211 aa19.33■□□□□ 0.68
CLCC1-202ENST00000348264 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.68
CLCC1-202ENST00000348264 MARF1Q9Y4F3 1742 aaKnown RBP19.33■□□□□ 0.68
CLCC1-202ENST00000348264 ANKARQ7Z5J8 1434 aa19.33■□□□□ 0.68
CLCC1-202ENST00000348264 MINK1Q8N4C8 1332 aaPredicted RBP19.32■□□□□ 0.68
CLCC1-202ENST00000348264 PHF8Q9UPP1 1060 aa19.31■□□□□ 0.68
CLCC1-202ENST00000348264 TULP4Q9NRJ4 1543 aa19.3■□□□□ 0.68
CLCC1-202ENST00000348264 SPATA31A3Q5VYP0 1347 aa19.28■□□□□ 0.68
CLCC1-202ENST00000348264 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
CLCC1-202ENST00000348264 TNS3Q68CZ2 1445 aa19.27■□□□□ 0.68
CLCC1-202ENST00000348264 KRT28Q7Z3Y7 464 aa19.27■□□□□ 0.68
CLCC1-202ENST00000348264 ABCA3Q99758 1704 aa19.27■□□□□ 0.68
CLCC1-202ENST00000348264 TRPM3Q9HCF6 1732 aaPredicted RBP19.26■□□□□ 0.67
CLCC1-202ENST00000348264 NGLY1Q96IV0 654 aa19.26■□□□□ 0.67
CLCC1-202ENST00000348264 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
CLCC1-202ENST00000348264 EIF3AQ14152 1382 aaKnown RBP19.26■□□□□ 0.67
CLCC1-202ENST00000348264 CDK12Q9NYV4 1490 aaPredicted RBP19.26■□□□□ 0.67
CLCC1-202ENST00000348264 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
CLCC1-202ENST00000348264 WASLO00401 505 aaPredicted RBP19.25■□□□□ 0.67
CLCC1-202ENST00000348264 RXRBP28702 533 aa19.25■□□□□ 0.67
CLCC1-202ENST00000348264 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
CLCC1-202ENST00000348264 PMFBP1Q8TBY8 1022 aa19.25■□□□□ 0.67
CLCC1-202ENST00000348264 ATP7BP35670 1465 aa19.24■□□□□ 0.67
CLCC1-202ENST00000348264 L3MBTL2Q969R5 705 aa19.24■□□□□ 0.67
CLCC1-202ENST00000348264 SBNO1A3KN83 1393 aa19.23■□□□□ 0.67
CLCC1-202ENST00000348264 RGS12O14924 1447 aa19.23■□□□□ 0.67
CLCC1-202ENST00000348264 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
CLCC1-202ENST00000348264 TOPAZ1Q8N9V7 1692 aa19.22■□□□□ 0.67
CLCC1-202ENST00000348264 ALS2Q96Q42 1657 aa19.22■□□□□ 0.67
CLCC1-202ENST00000348264 QTRT2Q9H974 415 aaKnown RBP19.22■□□□□ 0.67
CLCC1-202ENST00000348264 PSME1Q06323 249 aa19.21■□□□□ 0.67
CLCC1-202ENST00000348264 FNBP4Q8N3X1 1017 aaPredicted RBP19.21■□□□□ 0.67
CLCC1-202ENST00000348264 USP21Q9UK80 565 aa19.21■□□□□ 0.67
CLCC1-202ENST00000348264 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.2■□□□□ 0.66
CLCC1-202ENST00000348264 ATRNO75882 1429 aa19.2■□□□□ 0.66
CLCC1-202ENST00000348264 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
CLCC1-202ENST00000348264 RBM6P78332 1123 aaKnown RBP19.19■□□□□ 0.66
CLCC1-202ENST00000348264 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
CLCC1-202ENST00000348264 BCL9LQ86UU0 1499 aa19.19■□□□□ 0.66
CLCC1-202ENST00000348264 ARHGEF10O15013 1369 aa19.19■□□□□ 0.66
CLCC1-202ENST00000348264 PLCH1Q4KWH8 1693 aa19.17■□□□□ 0.66
CLCC1-202ENST00000348264 CABLES1Q8TDN4 633 aa19.17■□□□□ 0.66
CLCC1-202ENST00000348264 GPRASP1Q5JY77 1395 aa19.17■□□□□ 0.66
CLCC1-202ENST00000348264 CRYBG1Q9Y4K1 1723 aa19.17■□□□□ 0.66
CLCC1-202ENST00000348264 SLIT2O94813 1529 aa19.16■□□□□ 0.66
CLCC1-202ENST00000348264 LMOD2Q6P5Q4 547 aa19.16■□□□□ 0.66
CLCC1-202ENST00000348264 NUDT16Q96DE0 195 aaKnown RBP19.16■□□□□ 0.66
CLCC1-202ENST00000348264 CDK19Q9BWU1 502 aa19.16■□□□□ 0.66
CLCC1-202ENST00000348264 TRPC5Q9UL62 973 aaPredicted RBP19.16■□□□□ 0.66
CLCC1-202ENST00000348264 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
CLCC1-202ENST00000348264 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
CLCC1-202ENST00000348264 NGDNQ8NEJ9 315 aaKnown RBP19.14■□□□□ 0.65
CLCC1-202ENST00000348264 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
CLCC1-202ENST00000348264 NWD2Q9ULI1 1742 aa19.13■□□□□ 0.65
CLCC1-202ENST00000348264 HAP1P54257 671 aaPredicted RBP19.12■□□□□ 0.65
CLCC1-202ENST00000348264 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
CLCC1-202ENST00000348264 GLI3P10071 1580 aa19.1■□□□□ 0.65
CLCC1-202ENST00000348264 EP400Q96L91 3159 aa19.1■□□□□ 0.65
CLCC1-202ENST00000348264 POLR3AO14802 1390 aaPredicted RBP19.1■□□□□ 0.65
CLCC1-202ENST00000348264 UPF1Q92900 1129 aaKnown RBP eCLIP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms