RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 NEURL4Q96JN8 1562 aa7.3□□□□□ -1.24
VCAM1-202ENST00000347652 LTKP29376 864 aa7.3□□□□□ -1.24
VCAM1-202ENST00000347652 NUTM2DQ5VT03 806 aaPredicted RBP7.3□□□□□ -1.24
VCAM1-202ENST00000347652 SIN3AQ96ST3 1273 aa7.3□□□□□ -1.24
VCAM1-202ENST00000347652 CLTCL1P53675 1640 aa7.29□□□□□ -1.24
VCAM1-202ENST00000347652 IRF5Q13568 498 aa7.29□□□□□ -1.24
VCAM1-202ENST00000347652 TAF7LQ5H9L4 462 aa7.29□□□□□ -1.24
VCAM1-202ENST00000347652 THEMISQ8N1K5 641 aaPredicted RBP7.29□□□□□ -1.24
VCAM1-202ENST00000347652 BCL11BQ9C0K0 894 aaPredicted RBP7.29□□□□□ -1.24
VCAM1-202ENST00000347652 STAG3Q9UJ98 1225 aa7.29□□□□□ -1.24
VCAM1-202ENST00000347652 TMEM131LA2VDJ0 1609 aa7.29□□□□□ -1.24
VCAM1-202ENST00000347652 POLR1AO95602 1720 aaPredicted RBP7.29□□□□□ -1.24
VCAM1-202ENST00000347652 ADGRB3O60242 1522 aa7.29□□□□□ -1.24
VCAM1-202ENST00000347652 WDR70Q9NW82 654 aa7.28□□□□□ -1.24
VCAM1-202ENST00000347652 CIZ1Q9ULV3 898 aaPredicted RBP7.28□□□□□ -1.24
VCAM1-202ENST00000347652 CCDC144AA2RUR9 1427 aa7.28□□□□□ -1.24
VCAM1-202ENST00000347652 SLC52A1Q9NWF4 448 aa7.28□□□□□ -1.24
VCAM1-202ENST00000347652 TMEM2Q9UHN6 1383 aa7.28□□□□□ -1.24
VCAM1-202ENST00000347652 NEUROD1Q13562 356 aa7.28□□□□□ -1.24
VCAM1-202ENST00000347652 ARHGAP23Q9P227 1491 aa7.27□□□□□ -1.25
VCAM1-202ENST00000347652 SLIT1O75093 1534 aa7.27□□□□□ -1.25
VCAM1-202ENST00000347652 TXNDC2Q86VQ3 553 aa7.27□□□□□ -1.25
VCAM1-202ENST00000347652 ANKLE2Q86XL3 938 aa7.27□□□□□ -1.25
VCAM1-202ENST00000347652 ZFP91Q96JP5 570 aaPredicted RBP7.27□□□□□ -1.25
VCAM1-202ENST00000347652 ZNF335Q9H4Z2 1342 aaPredicted RBP7.27□□□□□ -1.25
VCAM1-202ENST00000347652 RETREG2Q8NC44 543 aa7.27□□□□□ -1.25
VCAM1-202ENST00000347652 TRAIPQ9BWF2 469 aa7.27□□□□□ -1.25
VCAM1-202ENST00000347652 SCAF11Q99590 1463 aaKnown RBP7.26□□□□□ -1.25
VCAM1-202ENST00000347652 E9PSI1 815 aa7.26□□□□□ -1.25
VCAM1-202ENST00000347652 CADPS2Q86UW7 1296 aa7.26□□□□□ -1.25
VCAM1-202ENST00000347652 NPHP4O75161 1426 aaPredicted RBP7.26□□□□□ -1.25
VCAM1-202ENST00000347652 ZFYVE9O95405 1425 aa7.26□□□□□ -1.25
VCAM1-202ENST00000347652 SPATA31E1Q6ZUB1 1445 aa7.26□□□□□ -1.25
VCAM1-202ENST00000347652 KDM5AP29375 1690 aaKnown RBP7.26□□□□□ -1.25
VCAM1-202ENST00000347652 SEMA3EO15041 775 aa7.25□□□□□ -1.25
VCAM1-202ENST00000347652 PPM1GO15355 546 aaPredicted RBP7.25□□□□□ -1.25
VCAM1-202ENST00000347652 IQGAP1P46940 1657 aa7.25□□□□□ -1.25
VCAM1-202ENST00000347652 RIMS2Q9UQ26 1411 aa7.25□□□□□ -1.25
VCAM1-202ENST00000347652 MED14O60244 1454 aa7.24□□□□□ -1.25
VCAM1-202ENST00000347652 TMED8Q6PL24 325 aaPredicted RBP7.24□□□□□ -1.25
VCAM1-202ENST00000347652 SLC26A8Q96RN1 970 aa7.24□□□□□ -1.25
VCAM1-202ENST00000347652 KIF1BO60333 1816 aa7.24□□□□□ -1.25
VCAM1-202ENST00000347652 ZNF326Q5BKZ1 582 aaKnown RBP7.24□□□□□ -1.25
VCAM1-202ENST00000347652 KDM4CQ9H3R0 1056 aa7.24□□□□□ -1.25
VCAM1-202ENST00000347652 DMRT2Q9Y5R5 561 aa7.24□□□□□ -1.25
VCAM1-202ENST00000347652 STRCP1A6NGW2 1772 aa7.24□□□□□ -1.25
VCAM1-202ENST00000347652 ZNF316A6NFI3 1004 aaPredicted RBP7.23□□□□□ -1.25
VCAM1-202ENST00000347652 RGL3Q3MIN7 710 aa7.23□□□□□ -1.25
VCAM1-202ENST00000347652 LTBP4Q8N2S1 1624 aa7.23□□□□□ -1.25
VCAM1-202ENST00000347652 TONSLQ96HA7 1378 aa7.23□□□□□ -1.25
VCAM1-202ENST00000347652 ZMYND10O75800 440 aa7.23□□□□□ -1.25
VCAM1-202ENST00000347652 ZEB1P37275 1124 aaPredicted RBP7.23□□□□□ -1.25
VCAM1-202ENST00000347652 ZNF592Q92610 1267 aa7.23□□□□□ -1.25
VCAM1-202ENST00000347652 L3MBTL2Q969R5 705 aa7.23□□□□□ -1.25
VCAM1-202ENST00000347652 EID1Q9Y6B2 187 aa7.23□□□□□ -1.25
VCAM1-202ENST00000347652 NEXMIFQ5QGS0 1516 aa7.22□□□□□ -1.25
VCAM1-202ENST00000347652 RBM33Q96EV2 1170 aaKnown RBP7.22□□□□□ -1.25
VCAM1-202ENST00000347652 PPP1R15AO75807 674 aaPredicted RBP7.22□□□□□ -1.25
VCAM1-202ENST00000347652 RPGRIP1LQ68CZ1 1315 aa7.21□□□□□ -1.25
VCAM1-202ENST00000347652 FAM117AQ9C073 453 aa7.21□□□□□ -1.25
VCAM1-202ENST00000347652 NRXN3Q9Y4C0 1643 aa7.21□□□□□ -1.26
VCAM1-202ENST00000347652 ADAMTS13Q76LX8 1427 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 CERS3Q8IU89 383 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 CERKQ8TCT0 537 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 DCAF11Q8TEB1 546 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 STAC3Q96MF2 364 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 PLEKHG1Q9ULL1 1385 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 IFT172Q9UG01 1749 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 POLA2Q14181 598 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 PPLO60437 1756 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 ADGRF5Q8IZF2 1346 aa7.2□□□□□ -1.26
VCAM1-202ENST00000347652 TRAK2O60296 914 aa7.19□□□□□ -1.26
VCAM1-202ENST00000347652 FBXW7Q969H0 707 aa7.19□□□□□ -1.26
VCAM1-202ENST00000347652 MYOM2P54296 1465 aa7.19□□□□□ -1.26
VCAM1-202ENST00000347652 NRXN1Q9ULB1 1477 aa7.18□□□□□ -1.26
VCAM1-202ENST00000347652 METP08581 1390 aa7.18□□□□□ -1.26
VCAM1-202ENST00000347652 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.18□□□□□ -1.26
VCAM1-202ENST00000347652 PTPRUQ92729 1446 aa7.18□□□□□ -1.26
VCAM1-202ENST00000347652 ONECUT3O60422 494 aaPredicted RBP7.18□□□□□ -1.26
VCAM1-202ENST00000347652 NBPF8Q3BBV2 869 aa7.18□□□□□ -1.26
VCAM1-202ENST00000347652 CCDC136Q96JN2 1154 aa7.18□□□□□ -1.26
VCAM1-202ENST00000347652 XIRP1Q702N8 1843 aaKnown RBP7.17□□□□□ -1.26
VCAM1-202ENST00000347652 PRAG1Q86YV5 1406 aa7.17□□□□□ -1.26
VCAM1-202ENST00000347652 VGFO15240 615 aaPredicted RBP7.17□□□□□ -1.26
VCAM1-202ENST00000347652 HDGFP51858 240 aaKnown RBP7.17□□□□□ -1.26
VCAM1-202ENST00000347652 ILDR1Q86SU0 546 aaPredicted RBP7.17□□□□□ -1.26
VCAM1-202ENST00000347652 ZNF219Q9P2Y4 722 aaPredicted RBP7.17□□□□□ -1.26
VCAM1-202ENST00000347652 LRRC7Q96NW7 1537 aa7.17□□□□□ -1.26
VCAM1-202ENST00000347652 SETBP1Q9Y6X0 1596 aa7.17□□□□□ -1.26
VCAM1-202ENST00000347652 KCNA6P17658 529 aa7.17□□□□□ -1.26
VCAM1-202ENST00000347652 SETD1AO15047 1707 aaKnown RBP7.17□□□□□ -1.26
VCAM1-202ENST00000347652 CHD2O14647 1828 aaKnown RBP7.16□□□□□ -1.26
VCAM1-202ENST00000347652 ZNF526Q8TF50 670 aaPredicted RBP7.16□□□□□ -1.26
VCAM1-202ENST00000347652 UNCXA6NJT0 531 aa7.16□□□□□ -1.26
VCAM1-202ENST00000347652 TBX22Q9Y458 520 aa7.16□□□□□ -1.26
VCAM1-202ENST00000347652 ALKQ9UM73 1620 aa7.16□□□□□ -1.26
VCAM1-202ENST00000347652 PIK3C2GO75747 1445 aa7.16□□□□□ -1.26
VCAM1-202ENST00000347652 A0A0U1RQG5 324 aaPredicted RBP7.15□□□□□ -1.26
VCAM1-202ENST00000347652 KDM4AO75164 1064 aa7.15□□□□□ -1.26
VCAM1-202ENST00000347652 TMEM132EQ6IEE7 984 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms