RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 NRXN1Q9ULB1 1477 aa22.65■■□□□ 1.22
SMARCC2-202ENST00000347471 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
SMARCC2-202ENST00000347471 PLEKHH1Q9ULM0 1364 aa22.65■■□□□ 1.22
SMARCC2-202ENST00000347471 CFAP53Q96M91 514 aa22.65■■□□□ 1.22
SMARCC2-202ENST00000347471 NEXMIFQ5QGS0 1516 aa22.65■■□□□ 1.22
SMARCC2-202ENST00000347471 PIK3C2BO00750 1634 aa22.64■■□□□ 1.21
SMARCC2-202ENST00000347471 ZMYM4Q5VZL5 1548 aa22.64■■□□□ 1.21
SMARCC2-202ENST00000347471 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
SMARCC2-202ENST00000347471 CLTCQ00610 1675 aaKnown RBP22.63■■□□□ 1.21
SMARCC2-202ENST00000347471 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
SMARCC2-202ENST00000347471 EID1Q9Y6B2 187 aa22.62■■□□□ 1.21
SMARCC2-202ENST00000347471 KDM5AP29375 1690 aaKnown RBP22.61■■□□□ 1.21
SMARCC2-202ENST00000347471 ADGRB1O14514 1584 aa22.61■■□□□ 1.21
SMARCC2-202ENST00000347471 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
SMARCC2-202ENST00000347471 SBNO2Q9Y2G9 1366 aa22.59■■□□□ 1.21
SMARCC2-202ENST00000347471 LTKP29376 864 aa22.59■■□□□ 1.21
SMARCC2-202ENST00000347471 PREX1Q8TCU6 1659 aa22.59■■□□□ 1.21
SMARCC2-202ENST00000347471 PPLO60437 1756 aa22.59■■□□□ 1.21
SMARCC2-202ENST00000347471 EXOC6Q8TAG9 804 aa22.58■■□□□ 1.21
SMARCC2-202ENST00000347471 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
SMARCC2-202ENST00000347471 METP08581 1390 aa22.58■■□□□ 1.21
SMARCC2-202ENST00000347471 A2ML1A8K2U0 1454 aa22.58■■□□□ 1.2
SMARCC2-202ENST00000347471 RRP1P56182 461 aaKnown RBP22.57■■□□□ 1.2
SMARCC2-202ENST00000347471 RBM33Q96EV2 1170 aaKnown RBP22.57■■□□□ 1.2
SMARCC2-202ENST00000347471 PDE3BQ13370 1112 aa22.57■■□□□ 1.2
SMARCC2-202ENST00000347471 MYO5BQ9ULV0 1848 aa22.55■■□□□ 1.2
SMARCC2-202ENST00000347471 KIF13AQ9H1H9 1805 aa22.53■■□□□ 1.2
SMARCC2-202ENST00000347471 ANKRD36BQ8N2N9 1353 aa22.53■■□□□ 1.2
SMARCC2-202ENST00000347471 FYB1O15117 783 aa22.53■■□□□ 1.2
SMARCC2-202ENST00000347471 ZRANB1Q9UGI0 708 aa22.53■■□□□ 1.2
SMARCC2-202ENST00000347471 KIAA1210Q9ULL0 1709 aa22.53■■□□□ 1.2
SMARCC2-202ENST00000347471 NEURL4Q96JN8 1562 aa22.52■■□□□ 1.2
SMARCC2-202ENST00000347471 TMEM131LA2VDJ0 1609 aa22.52■■□□□ 1.2
SMARCC2-202ENST00000347471 ATAD2Q6PL18 1390 aa22.52■■□□□ 1.2
SMARCC2-202ENST00000347471 CANXP27824 592 aaKnown RBP22.52■■□□□ 1.2
SMARCC2-202ENST00000347471 IFT172Q9UG01 1749 aa22.52■■□□□ 1.2
SMARCC2-202ENST00000347471 ZC3H13Q5T200 1668 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 SPINK5Q9NQ38 1064 aaPredicted RBP22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 AGLP35573 1532 aa22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 ARHGEF40Q8TER5 1519 aa22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 QRICH2Q9H0J4 1663 aa22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 SETBP1Q9Y6X0 1596 aa22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 TCP11L2Q8N4U5 519 aa22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 DMRT2Q9Y5R5 561 aa22.51■■□□□ 1.19
SMARCC2-202ENST00000347471 WASLO00401 505 aaPredicted RBP22.5■■□□□ 1.19
SMARCC2-202ENST00000347471 PMFBP1Q8TBY8 1022 aa22.5■■□□□ 1.19
SMARCC2-202ENST00000347471 NME9Q86XW9 330 aa22.49■■□□□ 1.19
SMARCC2-202ENST00000347471 TULP4Q9NRJ4 1543 aa22.49■■□□□ 1.19
SMARCC2-202ENST00000347471 ZFYVE9O95405 1425 aa22.49■■□□□ 1.19
SMARCC2-202ENST00000347471 ALKQ9UM73 1620 aa22.48■■□□□ 1.19
SMARCC2-202ENST00000347471 NPC1L1Q9UHC9 1359 aa22.47■■□□□ 1.19
SMARCC2-202ENST00000347471 TMEM2Q9UHN6 1383 aa22.47■■□□□ 1.19
SMARCC2-202ENST00000347471 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
SMARCC2-202ENST00000347471 FRAT1Q92837 279 aaPredicted RBP22.47■■□□□ 1.19
SMARCC2-202ENST00000347471 BCL2L13Q9BXK5 485 aa22.47■■□□□ 1.19
SMARCC2-202ENST00000347471 C20orf194Q5TEA3 1177 aa22.46■■□□□ 1.19
SMARCC2-202ENST00000347471 AMOTL2Q9Y2J4 779 aa22.46■■□□□ 1.19
SMARCC2-202ENST00000347471 MAPK8IP3Q9UPT6 1336 aa22.45■■□□□ 1.18
SMARCC2-202ENST00000347471 HMOX1P09601 288 aa22.45■■□□□ 1.18
SMARCC2-202ENST00000347471 CRBNQ96SW2 442 aa22.45■■□□□ 1.18
SMARCC2-202ENST00000347471 RRS1Q15050 365 aaKnown RBP22.44■■□□□ 1.18
SMARCC2-202ENST00000347471 THEMISQ8N1K5 641 aaPredicted RBP22.44■■□□□ 1.18
SMARCC2-202ENST00000347471 BLMP54132 1417 aaPredicted RBP22.44■■□□□ 1.18
SMARCC2-202ENST00000347471 MYOM1P52179 1685 aa22.44■■□□□ 1.18
SMARCC2-202ENST00000347471 DUSP27Q5VZP5 1158 aa22.44■■□□□ 1.18
SMARCC2-202ENST00000347471 RUNDC1Q96C34 613 aa22.44■■□□□ 1.18
SMARCC2-202ENST00000347471 LAS1LQ9Y4W2 734 aaKnown RBP22.44■■□□□ 1.18
SMARCC2-202ENST00000347471 PTPRMP28827 1452 aa22.43■■□□□ 1.18
SMARCC2-202ENST00000347471 ERICH6BQ5W0A0 696 aa22.43■■□□□ 1.18
SMARCC2-202ENST00000347471 CCDC61Q9Y6R9 512 aa22.43■■□□□ 1.18
SMARCC2-202ENST00000347471 EMILIN1Q9Y6C2 1016 aa22.42■■□□□ 1.18
SMARCC2-202ENST00000347471 RBM19Q9Y4C8 960 aaKnown RBP22.42■■□□□ 1.18
SMARCC2-202ENST00000347471 BCAR3O75815 825 aa22.41■■□□□ 1.18
SMARCC2-202ENST00000347471 NEFMP07197 916 aa22.41■■□□□ 1.18
SMARCC2-202ENST00000347471 NUTM2GQ5VZR2 741 aa22.41■■□□□ 1.18
SMARCC2-202ENST00000347471 WWC1Q8IX03 1113 aa22.41■■□□□ 1.18
SMARCC2-202ENST00000347471 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
SMARCC2-202ENST00000347471 NGDNQ8NEJ9 315 aaKnown RBP22.4■■□□□ 1.18
SMARCC2-202ENST00000347471 SLFN5Q08AF3 891 aa22.4■■□□□ 1.18
SMARCC2-202ENST00000347471 COG3Q96JB2 828 aa22.39■■□□□ 1.18
SMARCC2-202ENST00000347471 ABCC11Q96J66 1382 aa22.39■■□□□ 1.17
SMARCC2-202ENST00000347471 SPATA31D1Q6ZQQ2 1576 aa22.39■■□□□ 1.17
SMARCC2-202ENST00000347471 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
SMARCC2-202ENST00000347471 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
SMARCC2-202ENST00000347471 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
SMARCC2-202ENST00000347471 PPIP5K1Q6PFW1 1433 aa22.38■■□□□ 1.17
SMARCC2-202ENST00000347471 SKAP1Q86WV1 359 aa22.37■■□□□ 1.17
SMARCC2-202ENST00000347471 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
SMARCC2-202ENST00000347471 PAK3O75914 559 aaPredicted RBP22.37■■□□□ 1.17
SMARCC2-202ENST00000347471 E9PSI1 815 aa22.37■■□□□ 1.17
SMARCC2-202ENST00000347471 ARHGEF28Q8N1W1 1705 aaKnown RBP22.36■■□□□ 1.17
SMARCC2-202ENST00000347471 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
SMARCC2-202ENST00000347471 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
SMARCC2-202ENST00000347471 CLUAP1Q96AJ1 413 aa22.34■■□□□ 1.17
SMARCC2-202ENST00000347471 REREQ9P2R6 1566 aa22.34■■□□□ 1.17
SMARCC2-202ENST00000347471 PRR36Q9H6K5 1346 aa22.33■■□□□ 1.16
SMARCC2-202ENST00000347471 KCNA6P17658 529 aa22.32■■□□□ 1.16
SMARCC2-202ENST00000347471 RIPK4P57078 832 aa22.32■■□□□ 1.16
SMARCC2-202ENST00000347471 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms