RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 USP19O94966 1318 aa15.17■□□□□ 0.02
APP-201ENST00000346798 ADGRL1O94910 1474 aa15.17■□□□□ 0.02
APP-201ENST00000346798 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
APP-201ENST00000346798 ATP7AQ04656 1500 aa15.17■□□□□ 0.02
APP-201ENST00000346798 FTSJ3Q8IY81 847 aaKnown RBP15.16■□□□□ 0.02
APP-201ENST00000346798 RTEL1-TNFRSF6BF6WH68 1400 aa15.16■□□□□ 0.02
APP-201ENST00000346798 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
APP-201ENST00000346798 MAPK8IP3Q9UPT6 1336 aa15.16■□□□□ 0.02
APP-201ENST00000346798 ABCA6Q8N139 1617 aa15.15■□□□□ 0.02
APP-201ENST00000346798 POLR3AO14802 1390 aaPredicted RBP15.15■□□□□ 0.02
APP-201ENST00000346798 UPF2Q9HAU5 1272 aaKnown RBP15.15■□□□□ 0.02
APP-201ENST00000346798 CLASP1Q7Z460 1538 aa15.15■□□□□ 0.02
APP-201ENST00000346798 BECN1Q14457 450 aa15.15■□□□□ 0.02
APP-201ENST00000346798 POGKQ9P215 609 aa15.14■□□□□ 0.01
APP-201ENST00000346798 TET3O43151 1660 aa15.14■□□□□ 0.01
APP-201ENST00000346798 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
APP-201ENST00000346798 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
APP-201ENST00000346798 MAP3K4Q9Y6R4 1608 aa15.13■□□□□ 0.01
APP-201ENST00000346798 SRPK2P78362 688 aaKnown RBP15.12■□□□□ 0.01
APP-201ENST00000346798 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
APP-201ENST00000346798 NGEFQ8N5V2 710 aa15.12■□□□□ 0.01
APP-201ENST00000346798 RWDD1Q9H446 243 aaPredicted RBP15.11■□□□□ 0.01
APP-201ENST00000346798 MFAP1P55081 439 aaKnown RBP15.11■□□□□ 0.01
APP-201ENST00000346798 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
APP-201ENST00000346798 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
APP-201ENST00000346798 MYH16Q9H6N6 1097 aa15.1■□□□□ 0.01
APP-201ENST00000346798 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
APP-201ENST00000346798 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
APP-201ENST00000346798 KIF1BO60333 1816 aa15.09■□□□□ 0.01
APP-201ENST00000346798 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0.01
APP-201ENST00000346798 DZIP1LQ8IYY4 767 aaKnown RBP15.08■□□□□ 0.01
APP-201ENST00000346798 GZF1Q9H116 711 aaPredicted RBP15.08■□□□□ 0
APP-201ENST00000346798 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
APP-201ENST00000346798 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
APP-201ENST00000346798 EVC2Q86UK5 1308 aa15.07■□□□□ 0
APP-201ENST00000346798 MROH2AA6NES4 1674 aa15.07■□□□□ 0
APP-201ENST00000346798 TBC1D2Q9BYX2 928 aa15.07■□□□□ 0
APP-201ENST00000346798 MINK1Q8N4C8 1332 aaPredicted RBP15.07■□□□□ 0
APP-201ENST00000346798 MYOM2P54296 1465 aa15.07■□□□□ 0
APP-201ENST00000346798 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
APP-201ENST00000346798 DEPDC5O75140 1603 aa15.06■□□□□ 0
APP-201ENST00000346798 NINLQ9Y2I6 1382 aa15.06■□□□□ 0
APP-201ENST00000346798 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
APP-201ENST00000346798 FBLN1P23142 703 aa15.06■□□□□ 0
APP-201ENST00000346798 RAPGEF3O95398 923 aa15.05■□□□□ -0
APP-201ENST00000346798 SSH1Q8WYL5 1049 aa15.05■□□□□ -0
APP-201ENST00000346798 TRIM27P14373 513 aa15.04■□□□□ -0
APP-201ENST00000346798 TBC1D32Q96NH3 1257 aa15.04■□□□□ -0
APP-201ENST00000346798 NPATQ14207 1427 aa15.04■□□□□ -0
APP-201ENST00000346798 INO80Q9ULG1 1556 aaPredicted RBP15.04■□□□□ -0
APP-201ENST00000346798 PPRC1Q5VV67 1664 aaKnown RBP15.03■□□□□ -0
APP-201ENST00000346798 ASXL2Q76L83 1435 aa15.03■□□□□ -0
APP-201ENST00000346798 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
APP-201ENST00000346798 NOB1Q9ULX3 412 aaKnown RBP15.03■□□□□ -0
APP-201ENST00000346798 EFCAB6Q5THR3 1501 aa15.03■□□□□ -0
APP-201ENST00000346798 PHF23Q9BUL5 403 aaPredicted RBP15.03■□□□□ -0
APP-201ENST00000346798 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
APP-201ENST00000346798 MROH1Q8NDA8 1641 aa15.03■□□□□ -0
APP-201ENST00000346798 TMPOP42166 694 aaKnown RBP15.02■□□□□ -0
APP-201ENST00000346798 RIPK4P57078 832 aa15.02■□□□□ -0
APP-201ENST00000346798 VWDEQ8N2E2 1590 aa15.02■□□□□ -0
APP-201ENST00000346798 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
APP-201ENST00000346798 VGFO15240 615 aaPredicted RBP15.01□□□□□ -0.01
APP-201ENST00000346798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.01□□□□□ -0.01
APP-201ENST00000346798 C22orf23Q9BZE7 217 aa15.01□□□□□ -0.01
APP-201ENST00000346798 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
APP-201ENST00000346798 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
APP-201ENST00000346798 TMEM57Q8N5G2 664 aa15.01□□□□□ -0.01
APP-201ENST00000346798 LNPKQ9C0E8 428 aa15□□□□□ -0.01
APP-201ENST00000346798 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
APP-201ENST00000346798 CCDC27Q2M243 656 aa14.99□□□□□ -0.01
APP-201ENST00000346798 TRIM35Q9UPQ4 493 aa14.99□□□□□ -0.01
APP-201ENST00000346798 IQSEC2Q5JU85 1478 aa14.99□□□□□ -0.01
APP-201ENST00000346798 IDI1Q13907 227 aa14.99□□□□□ -0.01
APP-201ENST00000346798 ATF7IPQ6VMQ6 1270 aa14.98□□□□□ -0.01
APP-201ENST00000346798 PRAM1Q96QH2 718 aa14.98□□□□□ -0.01
APP-201ENST00000346798 THUMPD2Q9BTF0 503 aaKnown RBP14.98□□□□□ -0.01
APP-201ENST00000346798 ANTXR1Q9H6X2 564 aa14.98□□□□□ -0.01
APP-201ENST00000346798 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
APP-201ENST00000346798 A0A1W2PP64 1363 aa14.98□□□□□ -0.01
APP-201ENST00000346798 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
APP-201ENST00000346798 C1orf115Q9H7X2 142 aa14.98□□□□□ -0.01
APP-201ENST00000346798 ABCA9Q8IUA7 1624 aa14.98□□□□□ -0.01
APP-201ENST00000346798 DDX19BQ9UMR2 479 aa14.97□□□□□ -0.01
APP-201ENST00000346798 HMOX1P09601 288 aa14.97□□□□□ -0.01
APP-201ENST00000346798 ARAP3Q8WWN8 1544 aa14.97□□□□□ -0.01
APP-201ENST00000346798 KIDINS220Q9ULH0 1771 aa14.97□□□□□ -0.01
APP-201ENST00000346798 FYB1O15117 783 aa14.97□□□□□ -0.01
APP-201ENST00000346798 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
APP-201ENST00000346798 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
APP-201ENST00000346798 ADGRB3O60242 1522 aa14.96□□□□□ -0.01
APP-201ENST00000346798 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.02
APP-201ENST00000346798 AAMPQ13685 434 aa14.96□□□□□ -0.02
APP-201ENST00000346798 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
APP-201ENST00000346798 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
APP-201ENST00000346798 TERF2IPQ9NYB0 399 aa14.94□□□□□ -0.02
APP-201ENST00000346798 CABP1Q9NZU7 370 aa14.94□□□□□ -0.02
APP-201ENST00000346798 CD109Q6YHK3 1445 aa14.94□□□□□ -0.02
APP-201ENST00000346798 ADGRB1O14514 1584 aa14.94□□□□□ -0.02
APP-201ENST00000346798 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms