RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 TCP11L2Q8N4U5 519 aa17.14■□□□□ 0.34
SNX21-202ENST00000344780 NAP1L5Q96NT1 182 aaPredicted RBP17.14■□□□□ 0.34
SNX21-202ENST00000344780 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
SNX21-202ENST00000344780 ERVK-7P63135 1459 aa17.13■□□□□ 0.33
SNX21-202ENST00000344780 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
SNX21-202ENST00000344780 C14orf93Q9H972 538 aaKnown RBP17.12■□□□□ 0.33
SNX21-202ENST00000344780 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
SNX21-202ENST00000344780 POGKQ9P215 609 aa17.12■□□□□ 0.33
SNX21-202ENST00000344780 PIK3C2GO75747 1445 aa17.11■□□□□ 0.33
SNX21-202ENST00000344780 NPATQ14207 1427 aa17.11■□□□□ 0.33
SNX21-202ENST00000344780 LAMC1P11047 1609 aa17.1■□□□□ 0.33
SNX21-202ENST00000344780 INSRP06213 1382 aa17.1■□□□□ 0.33
SNX21-202ENST00000344780 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
SNX21-202ENST00000344780 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
SNX21-202ENST00000344780 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
SNX21-202ENST00000344780 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.33
SNX21-202ENST00000344780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.33
SNX21-202ENST00000344780 SLC24A1O60721 1099 aa17.08■□□□□ 0.32
SNX21-202ENST00000344780 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
SNX21-202ENST00000344780 CFAP53Q96M91 514 aa17.08■□□□□ 0.32
SNX21-202ENST00000344780 SEC24BO95487 1268 aa17.07■□□□□ 0.32
SNX21-202ENST00000344780 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
SNX21-202ENST00000344780 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
SNX21-202ENST00000344780 TET3O43151 1660 aa17.07■□□□□ 0.32
SNX21-202ENST00000344780 VGFO15240 615 aaPredicted RBP17.07■□□□□ 0.32
SNX21-202ENST00000344780 SPRYD3Q8NCJ5 442 aa17.07■□□□□ 0.32
SNX21-202ENST00000344780 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
SNX21-202ENST00000344780 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
SNX21-202ENST00000344780 RNF17Q9BXT8 1623 aaKnown RBP17.06■□□□□ 0.32
SNX21-202ENST00000344780 RLBP1P12271 317 aa17.06■□□□□ 0.32
SNX21-202ENST00000344780 IQGAP1P46940 1657 aa17.06■□□□□ 0.32
SNX21-202ENST00000344780 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
SNX21-202ENST00000344780 SYNMO15061 1565 aa17.05■□□□□ 0.32
SNX21-202ENST00000344780 ABCA6Q8N139 1617 aa17.05■□□□□ 0.32
SNX21-202ENST00000344780 CEP152O94986 1710 aa17.05■□□□□ 0.32
SNX21-202ENST00000344780 ARID3AQ99856 593 aa17.05■□□□□ 0.32
SNX21-202ENST00000344780 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
SNX21-202ENST00000344780 RARSP54136 660 aaKnown RBP17.04■□□□□ 0.32
SNX21-202ENST00000344780 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
SNX21-202ENST00000344780 RSPH6AQ9H0K4 717 aa17.04■□□□□ 0.32
SNX21-202ENST00000344780 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
SNX21-202ENST00000344780 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
SNX21-202ENST00000344780 INO80Q9ULG1 1556 aaPredicted RBP17.03■□□□□ 0.32
SNX21-202ENST00000344780 KIDINS220Q9ULH0 1771 aa17.03■□□□□ 0.32
SNX21-202ENST00000344780 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
SNX21-202ENST00000344780 PCDHB15Q9Y5E8 787 aa17.03■□□□□ 0.32
SNX21-202ENST00000344780 PPRC1Q5VV67 1664 aaKnown RBP17.03■□□□□ 0.32
SNX21-202ENST00000344780 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.32
SNX21-202ENST00000344780 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.32
SNX21-202ENST00000344780 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.31
SNX21-202ENST00000344780 KDM5AP29375 1690 aaKnown RBP17.02■□□□□ 0.31
SNX21-202ENST00000344780 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
SNX21-202ENST00000344780 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
SNX21-202ENST00000344780 MROH1Q8NDA8 1641 aa17.01■□□□□ 0.31
SNX21-202ENST00000344780 EFCAB6Q5THR3 1501 aa17■□□□□ 0.31
SNX21-202ENST00000344780 KIF1BO60333 1816 aa17■□□□□ 0.31
SNX21-202ENST00000344780 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
SNX21-202ENST00000344780 YEATS2Q9ULM3 1422 aa16.99■□□□□ 0.31
SNX21-202ENST00000344780 UPF2Q9HAU5 1272 aaKnown RBP16.99■□□□□ 0.31
SNX21-202ENST00000344780 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
SNX21-202ENST00000344780 POGZQ7Z3K3 1410 aa16.99■□□□□ 0.31
SNX21-202ENST00000344780 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
SNX21-202ENST00000344780 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
SNX21-202ENST00000344780 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
SNX21-202ENST00000344780 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
SNX21-202ENST00000344780 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
SNX21-202ENST00000344780 MYOM1P52179 1685 aa16.97■□□□□ 0.31
SNX21-202ENST00000344780 ITPRIPQ8IWB1 547 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 PMFBP1Q8TBY8 1022 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
SNX21-202ENST00000344780 SOX12O15370 315 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 VWDEQ8N2E2 1590 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 HMOX1P09601 288 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
SNX21-202ENST00000344780 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
SNX21-202ENST00000344780 NCKAP5LQ9HCH0 1330 aa16.95■□□□□ 0.3
SNX21-202ENST00000344780 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
SNX21-202ENST00000344780 BECN1Q14457 450 aa16.95■□□□□ 0.3
SNX21-202ENST00000344780 RWDD1Q9H446 243 aaPredicted RBP16.94■□□□□ 0.3
SNX21-202ENST00000344780 MYOM2P54296 1465 aa16.94■□□□□ 0.3
SNX21-202ENST00000344780 THUMPD2Q9BTF0 503 aaKnown RBP16.94■□□□□ 0.3
SNX21-202ENST00000344780 FYB1O15117 783 aa16.93■□□□□ 0.3
SNX21-202ENST00000344780 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
SNX21-202ENST00000344780 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
SNX21-202ENST00000344780 MFAP1P55081 439 aaKnown RBP16.92■□□□□ 0.3
SNX21-202ENST00000344780 ZKSCAN2Q63HK3 967 aa16.92■□□□□ 0.3
SNX21-202ENST00000344780 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
SNX21-202ENST00000344780 RIPK4P57078 832 aa16.92■□□□□ 0.3
SNX21-202ENST00000344780 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
SNX21-202ENST00000344780 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
SNX21-202ENST00000344780 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
SNX21-202ENST00000344780 FRMPD1Q5SYB0 1578 aa16.91■□□□□ 0.3
SNX21-202ENST00000344780 USP19O94966 1318 aa16.91■□□□□ 0.3
SNX21-202ENST00000344780 TXNDC2Q86VQ3 553 aa16.9■□□□□ 0.3
SNX21-202ENST00000344780 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
SNX21-202ENST00000344780 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.29
SNX21-202ENST00000344780 ABCC3O15438 1527 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms