RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 SHPRHQ149N8 1683 aa29.27■■■□□ 2.28
CEACAM3-201ENST00000344550 CFAP70Q5T0N1 1121 aa29.26■■■□□ 2.27
CEACAM3-201ENST00000344550 RGS17Q9UGC6 210 aaPredicted RBP29.24■■■□□ 2.27
CEACAM3-201ENST00000344550 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
CEACAM3-201ENST00000344550 DCAF11Q8TEB1 546 aa29.23■■■□□ 2.27
CEACAM3-201ENST00000344550 DLC1Q96QB1 1528 aa29.2■■■□□ 2.26
CEACAM3-201ENST00000344550 SOS2Q07890 1332 aaPredicted RBP29.2■■■□□ 2.26
CEACAM3-201ENST00000344550 ORAI2Q96SN7 254 aa29.19■■■□□ 2.26
CEACAM3-201ENST00000344550 PLEKHH1Q9ULM0 1364 aa29.16■■■□□ 2.26
CEACAM3-201ENST00000344550 ADGRB1O14514 1584 aa29.16■■■□□ 2.26
CEACAM3-201ENST00000344550 NPHP3Q7Z494 1330 aa29.16■■■□□ 2.26
CEACAM3-201ENST00000344550 KDM2AQ9Y2K7 1162 aa29.15■■■□□ 2.26
CEACAM3-201ENST00000344550 ESCO1Q5FWF5 840 aa29.14■■■□□ 2.26
CEACAM3-201ENST00000344550 LRP6O75581 1613 aa29.12■■■□□ 2.25
CEACAM3-201ENST00000344550 MEX3CQ5U5Q3 659 aaKnown RBP29.12■■■□□ 2.25
CEACAM3-201ENST00000344550 PNPLA6Q8IY17 1366 aa29.12■■■□□ 2.25
CEACAM3-201ENST00000344550 PRAM1Q96QH2 718 aa29.11■■■□□ 2.25
CEACAM3-201ENST00000344550 ZNF772Q68DY9 489 aaPredicted RBP29.1■■■□□ 2.25
CEACAM3-201ENST00000344550 DDX17Q92841 729 aaKnown RBP29.1■■■□□ 2.25
CEACAM3-201ENST00000344550 POGKQ9P215 609 aa29.1■■■□□ 2.25
CEACAM3-201ENST00000344550 FMN2Q9NZ56 1722 aa29.08■■■□□ 2.25
CEACAM3-201ENST00000344550 POTEAQ6S8J7 498 aa29.07■■■□□ 2.24
CEACAM3-201ENST00000344550 EIF3AQ14152 1382 aaKnown RBP29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 NUTM2BA6NNL0 878 aaPredicted RBP29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 NUTM2EB1AL46 878 aaPredicted RBP29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 FOXO3O43524 673 aa29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 NUTM2AQ8IVF1 878 aaPredicted RBP29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 TRAK1Q9UPV9 953 aa29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 ADGRB2O60241 1585 aa29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
CEACAM3-201ENST00000344550 KIF1AQ12756 1690 aa29.02■■■□□ 2.24
CEACAM3-201ENST00000344550 PXDNQ92626 1479 aa29.02■■■□□ 2.24
CEACAM3-201ENST00000344550 KIAA1210Q9ULL0 1709 aa29.01■■■□□ 2.23
CEACAM3-201ENST00000344550 NUTM2FA1L443 756 aa28.98■■■□□ 2.23
CEACAM3-201ENST00000344550 COL22A1Q8NFW1 1626 aaPredicted RBP28.98■■■□□ 2.23
CEACAM3-201ENST00000344550 SAFB2Q14151 953 aaKnown RBP eCLIP28.97■■■□□ 2.23
CEACAM3-201ENST00000344550 PHF8Q9UPP1 1060 aa28.97■■■□□ 2.23
CEACAM3-201ENST00000344550 PSME1Q06323 249 aa28.94■■■□□ 2.22
CEACAM3-201ENST00000344550 AFF2P51816 1311 aa28.93■■■□□ 2.22
CEACAM3-201ENST00000344550 WASLO00401 505 aaPredicted RBP28.92■■■□□ 2.22
CEACAM3-201ENST00000344550 SPATA31A3Q5VYP0 1347 aa28.92■■■□□ 2.22
CEACAM3-201ENST00000344550 KRT28Q7Z3Y7 464 aa28.91■■■□□ 2.22
CEACAM3-201ENST00000344550 TRIM26Q12899 539 aaPredicted RBP28.9■■■□□ 2.22
CEACAM3-201ENST00000344550 SBNO1A3KN83 1393 aa28.89■■■□□ 2.22
CEACAM3-201ENST00000344550 C8orf37Q96NL8 207 aa28.89■■■□□ 2.22
CEACAM3-201ENST00000344550 MINK1Q8N4C8 1332 aaPredicted RBP28.89■■■□□ 2.21
CEACAM3-201ENST00000344550 L3MBTL2Q969R5 705 aa28.88■■■□□ 2.21
CEACAM3-201ENST00000344550 NGLY1Q96IV0 654 aa28.88■■■□□ 2.21
CEACAM3-201ENST00000344550 ARHGEF28Q8N1W1 1705 aaKnown RBP28.88■■■□□ 2.21
CEACAM3-201ENST00000344550 TULP4Q9NRJ4 1543 aa28.88■■■□□ 2.21
CEACAM3-201ENST00000344550 CDK12Q9NYV4 1490 aaPredicted RBP28.87■■■□□ 2.21
CEACAM3-201ENST00000344550 RXRBP28702 533 aa28.87■■■□□ 2.21
CEACAM3-201ENST00000344550 XPCQ01831 940 aaPredicted RBP28.87■■■□□ 2.21
CEACAM3-201ENST00000344550 ADAMTS2O95450 1211 aa28.86■■■□□ 2.21
CEACAM3-201ENST00000344550 FNBP4Q8N3X1 1017 aaPredicted RBP28.86■■■□□ 2.21
CEACAM3-201ENST00000344550 HIRIP3Q9BW71 556 aaPredicted RBP28.86■■■□□ 2.21
CEACAM3-201ENST00000344550 RGPD8O14715 1765 aaPredicted RBP28.85■■■□□ 2.21
CEACAM3-201ENST00000344550 USP32Q8NFA0 1604 aa28.84■■■□□ 2.21
CEACAM3-201ENST00000344550 NBPF1Q3BBV0 1214 aa28.83■■■□□ 2.21
CEACAM3-201ENST00000344550 ARHGEF10O15013 1369 aa28.83■■■□□ 2.21
CEACAM3-201ENST00000344550 TNS3Q68CZ2 1445 aa28.83■■■□□ 2.21
CEACAM3-201ENST00000344550 SIN3AQ96ST3 1273 aa28.82■■■□□ 2.2
CEACAM3-201ENST00000344550 QTRT2Q9H974 415 aaKnown RBP28.81■■■□□ 2.2
CEACAM3-201ENST00000344550 GPRASP1Q5JY77 1395 aa28.8■■■□□ 2.2
CEACAM3-201ENST00000344550 PRR36Q9H6K5 1346 aa28.8■■■□□ 2.2
CEACAM3-201ENST00000344550 RBM6P78332 1123 aaKnown RBP28.8■■■□□ 2.2
CEACAM3-201ENST00000344550 PMFBP1Q8TBY8 1022 aa28.78■■■□□ 2.2
CEACAM3-201ENST00000344550 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
CEACAM3-201ENST00000344550 USP21Q9UK80 565 aa28.77■■■□□ 2.2
CEACAM3-201ENST00000344550 TRPC5Q9UL62 973 aaPredicted RBP28.77■■■□□ 2.2
CEACAM3-201ENST00000344550 NUDT16Q96DE0 195 aaKnown RBP28.76■■■□□ 2.19
CEACAM3-201ENST00000344550 CENPJQ9HC77 1338 aaPredicted RBP28.75■■■□□ 2.19
CEACAM3-201ENST00000344550 CDK19Q9BWU1 502 aa28.75■■■□□ 2.19
CEACAM3-201ENST00000344550 ATP7BP35670 1465 aa28.74■■■□□ 2.19
CEACAM3-201ENST00000344550 CCDC61Q9Y6R9 512 aa28.74■■■□□ 2.19
CEACAM3-201ENST00000344550 ITSN1Q15811 1721 aa28.74■■■□□ 2.19
CEACAM3-201ENST00000344550 MARF1Q9Y4F3 1742 aaKnown RBP28.74■■■□□ 2.19
CEACAM3-201ENST00000344550 NGDNQ8NEJ9 315 aaKnown RBP28.73■■■□□ 2.19
CEACAM3-201ENST00000344550 TRPM1Q7Z4N2 1603 aa28.69■■■□□ 2.18
CEACAM3-201ENST00000344550 PLEKHG3A1L390 1219 aa28.69■■■□□ 2.18
CEACAM3-201ENST00000344550 ATRNO75882 1429 aa28.69■■■□□ 2.18
CEACAM3-201ENST00000344550 BCL9LQ86UU0 1499 aa28.68■■■□□ 2.18
CEACAM3-201ENST00000344550 HAP1P54257 671 aaPredicted RBP28.68■■■□□ 2.18
CEACAM3-201ENST00000344550 TRPM3Q9HCF6 1732 aaPredicted RBP28.68■■■□□ 2.18
CEACAM3-201ENST00000344550 POLR3AO14802 1390 aaPredicted RBP28.67■■■□□ 2.18
CEACAM3-201ENST00000344550 ROCK2O75116 1388 aaKnown RBP28.67■■■□□ 2.18
CEACAM3-201ENST00000344550 SLIT2O94813 1529 aa28.66■■■□□ 2.18
CEACAM3-201ENST00000344550 LMOD2Q6P5Q4 547 aa28.66■■■□□ 2.18
CEACAM3-201ENST00000344550 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.18
CEACAM3-201ENST00000344550 ALS2Q96Q42 1657 aa28.64■■■□□ 2.17
CEACAM3-201ENST00000344550 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.63■■■□□ 2.17
CEACAM3-201ENST00000344550 TONSLQ96HA7 1378 aa28.62■■■□□ 2.17
CEACAM3-201ENST00000344550 TOPAZ1Q8N9V7 1692 aa28.62■■■□□ 2.17
CEACAM3-201ENST00000344550 BRD4O60885 1362 aaPredicted RBP28.62■■■□□ 2.17
CEACAM3-201ENST00000344550 SRPK2P78362 688 aaKnown RBP28.61■■■□□ 2.17
CEACAM3-201ENST00000344550 RGS12O14924 1447 aa28.6■■■□□ 2.17
CEACAM3-201ENST00000344550 NBPF8Q3BBV2 869 aa28.6■■■□□ 2.17
CEACAM3-201ENST00000344550 CABLES1Q8TDN4 633 aa28.6■■■□□ 2.17
CEACAM3-201ENST00000344550 QRICH2Q9H0J4 1663 aa28.59■■■□□ 2.17
CEACAM3-201ENST00000344550 GJD4Q96KN9 370 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms