RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
TRIO-202ENST00000344204 RRP7AQ9Y3A4 280 aaKnown RBP16.32■□□□□ 0.2
TRIO-202ENST00000344204 SKIDA1Q1XH10 827 aa16.31■□□□□ 0.2
TRIO-202ENST00000344204 TMCO3Q6UWJ1 677 aa16.31■□□□□ 0.2
TRIO-202ENST00000344204 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
TRIO-202ENST00000344204 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRIO-202ENST00000344204 PLEKHH2Q8IVE3 1493 aa16.31■□□□□ 0.2
TRIO-202ENST00000344204 PANK3Q9H999 370 aa16.3■□□□□ 0.2
TRIO-202ENST00000344204 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
TRIO-202ENST00000344204 CENPHQ9H3R5 247 aa16.3■□□□□ 0.2
TRIO-202ENST00000344204 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
TRIO-202ENST00000344204 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
TRIO-202ENST00000344204 TNNT1P13805 278 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 PDILTQ8N807 584 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 ANO2Q9NQ90 1003 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 OFD1O75665 1012 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 VGLL3A8MV65 326 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 ZRSR2Q15696 482 aaKnown RBP16.29■□□□□ 0.2
TRIO-202ENST00000344204 UBXN4Q92575 508 aa16.29■□□□□ 0.2
TRIO-202ENST00000344204 CLSTN1O94985 981 aa16.28■□□□□ 0.2
TRIO-202ENST00000344204 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
TRIO-202ENST00000344204 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
TRIO-202ENST00000344204 KINO60870 393 aaKnown RBP16.28■□□□□ 0.2
TRIO-202ENST00000344204 KIF18AQ8NI77 898 aa16.28■□□□□ 0.2
TRIO-202ENST00000344204 UACAQ9BZF9 1416 aa16.28■□□□□ 0.2
TRIO-202ENST00000344204 LMOD3Q0VAK6 560 aa16.28■□□□□ 0.2
TRIO-202ENST00000344204 GOLGA6L10A6NI86 522 aa16.28■□□□□ 0.2
TRIO-202ENST00000344204 TTLL5Q6EMB2 1281 aa16.28■□□□□ 0.2
TRIO-202ENST00000344204 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
TRIO-202ENST00000344204 OLFM4Q6UX06 510 aa16.27■□□□□ 0.2
TRIO-202ENST00000344204 PRDM2Q13029 1718 aa16.27■□□□□ 0.2
TRIO-202ENST00000344204 POLR3GO15318 223 aaPredicted RBP16.27■□□□□ 0.2
TRIO-202ENST00000344204 RSPH4AQ5TD94 716 aa16.27■□□□□ 0.2
TRIO-202ENST00000344204 FIBPO43427 364 aa16.27■□□□□ 0.2
TRIO-202ENST00000344204 PLEKHD1A6NEE1 506 aa16.27■□□□□ 0.19
TRIO-202ENST00000344204 KANK1Q14678 1352 aa16.26■□□□□ 0.19
TRIO-202ENST00000344204 HS1BP3Q53T59 392 aa16.26■□□□□ 0.19
TRIO-202ENST00000344204 PDCP20941 246 aa16.26■□□□□ 0.19
TRIO-202ENST00000344204 TNMDQ9H2S6 317 aa16.26■□□□□ 0.19
TRIO-202ENST00000344204 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
TRIO-202ENST00000344204 NUP155O75694 1391 aa16.26■□□□□ 0.19
TRIO-202ENST00000344204 CLGNO14967 610 aa16.25■□□□□ 0.19
TRIO-202ENST00000344204 C14orf37Q86TY3 774 aa16.25■□□□□ 0.19
TRIO-202ENST00000344204 PDZRN3Q9UPQ7 1066 aa16.25■□□□□ 0.19
TRIO-202ENST00000344204 MNAT1P51948 309 aa16.25■□□□□ 0.19
TRIO-202ENST00000344204 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
TRIO-202ENST00000344204 HDAC5Q9UQL6 1122 aa16.25■□□□□ 0.19
TRIO-202ENST00000344204 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
TRIO-202ENST00000344204 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
TRIO-202ENST00000344204 SRPK2P78362 688 aaKnown RBP16.24■□□□□ 0.19
TRIO-202ENST00000344204 PTPN14Q15678 1187 aa16.24■□□□□ 0.19
TRIO-202ENST00000344204 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
TRIO-202ENST00000344204 CCDC91Q7Z6B0 441 aa16.24■□□□□ 0.19
TRIO-202ENST00000344204 NEFHP12036 1026 aa16.24■□□□□ 0.19
TRIO-202ENST00000344204 CT47A1Q5JQC4 288 aaPredicted RBP16.24■□□□□ 0.19
TRIO-202ENST00000344204 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
TRIO-202ENST00000344204 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
TRIO-202ENST00000344204 FILIP1Q7Z7B0 1213 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 PANK2Q9BZ23 570 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 CEP89Q96ST8 783 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 GON4LQ3T8J9 2241 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 SHTN1A0MZ66 631 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
TRIO-202ENST00000344204 APAF1O14727 1248 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 CUX2O14529 1486 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
TRIO-202ENST00000344204 IVLP07476 585 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 TDO2P48775 406 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.22■□□□□ 0.19
TRIO-202ENST00000344204 MYO6Q9UM54 1294 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 MROH2BQ7Z745 1585 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 TTC31Q49AM3 519 aaPredicted RBP16.22■□□□□ 0.19
TRIO-202ENST00000344204 SDF4Q9BRK5 362 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 IQCEQ6IPM2 695 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
TRIO-202ENST00000344204 TNPO1Q92973 898 aaKnown RBP16.22■□□□□ 0.19
TRIO-202ENST00000344204 SSR1P43307 286 aaKnown RBP16.21■□□□□ 0.19
TRIO-202ENST00000344204 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
TRIO-202ENST00000344204 CCDC183Q5T5S1 534 aa16.21■□□□□ 0.19
TRIO-202ENST00000344204 PCMTD1Q96MG8 357 aaPredicted RBP16.21■□□□□ 0.18
TRIO-202ENST00000344204 DNAAF4Q8WXU2 420 aa16.2■□□□□ 0.18
TRIO-202ENST00000344204 ZFP91Q96JP5 570 aaPredicted RBP16.2■□□□□ 0.18
TRIO-202ENST00000344204 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
TRIO-202ENST00000344204 TERF1P54274 439 aa16.2■□□□□ 0.18
TRIO-202ENST00000344204 BMS1Q14692 1282 aaKnown RBP16.2■□□□□ 0.18
TRIO-202ENST00000344204 TBC1D2Q9BYX2 928 aa16.2■□□□□ 0.18
TRIO-202ENST00000344204 PAXBP1Q9Y5B6 917 aa16.2■□□□□ 0.18
TRIO-202ENST00000344204 NAP1L1P55209 391 aaKnown RBP16.19■□□□□ 0.18
TRIO-202ENST00000344204 FAM193AP78312 1265 aa16.19■□□□□ 0.18
TRIO-202ENST00000344204 NEK4P51957 841 aa16.19■□□□□ 0.18
TRIO-202ENST00000344204 MAP9Q49MG5 647 aa16.19■□□□□ 0.18
TRIO-202ENST00000344204 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
TRIO-202ENST00000344204 FEZ1Q99689 392 aa16.18■□□□□ 0.18
TRIO-202ENST00000344204 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
TRIO-202ENST00000344204 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms