RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 TMEM132EQ6IEE7 984 aa26.34■■□□□ 1.81
USF2-202ENST00000343550 LRPPRCP42704 1394 aaKnown RBP26.33■■□□□ 1.81
USF2-202ENST00000343550 WAPLQ7Z5K2 1190 aa26.33■■□□□ 1.81
USF2-202ENST00000343550 C8orf37Q96NL8 207 aa26.32■■□□□ 1.8
USF2-202ENST00000343550 LAMC1P11047 1609 aa26.32■■□□□ 1.8
USF2-202ENST00000343550 ABCC11Q96J66 1382 aa26.31■■□□□ 1.8
USF2-202ENST00000343550 TECPR2O15040 1411 aa26.31■■□□□ 1.8
USF2-202ENST00000343550 PIK3C2GO75747 1445 aa26.31■■□□□ 1.8
USF2-202ENST00000343550 ESCO1Q5FWF5 840 aa26.3■■□□□ 1.8
USF2-202ENST00000343550 IFT172Q9UG01 1749 aa26.3■■□□□ 1.8
USF2-202ENST00000343550 CDC42BPGQ6DT37 1551 aa26.28■■□□□ 1.8
USF2-202ENST00000343550 ADAMTS2O95450 1211 aa26.27■■□□□ 1.8
USF2-202ENST00000343550 NGLY1Q96IV0 654 aa26.25■■□□□ 1.79
USF2-202ENST00000343550 C14orf93Q9H972 538 aaKnown RBP26.25■■□□□ 1.79
USF2-202ENST00000343550 QTRT2Q9H974 415 aaKnown RBP26.25■■□□□ 1.79
USF2-202ENST00000343550 NPHP3Q7Z494 1330 aa26.25■■□□□ 1.79
USF2-202ENST00000343550 PLEKHH1Q9ULM0 1364 aa26.25■■□□□ 1.79
USF2-202ENST00000343550 YTHDC2Q9H6S0 1430 aaKnown RBP26.24■■□□□ 1.79
USF2-202ENST00000343550 NUTM2FA1L443 756 aa26.24■■□□□ 1.79
USF2-202ENST00000343550 FOXO3O43524 673 aa26.23■■□□□ 1.79
USF2-202ENST00000343550 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
USF2-202ENST00000343550 SIRT1Q96EB6 747 aa26.22■■□□□ 1.79
USF2-202ENST00000343550 CFAP70Q5T0N1 1121 aa26.21■■□□□ 1.79
USF2-202ENST00000343550 UPF1Q92900 1129 aaKnown RBP eCLIP26.21■■□□□ 1.79
USF2-202ENST00000343550 RBM6P78332 1123 aaKnown RBP26.2■■□□□ 1.79
USF2-202ENST00000343550 NRXN1Q9ULB1 1477 aa26.2■■□□□ 1.78
USF2-202ENST00000343550 DHX57Q6P158 1386 aaKnown RBP26.2■■□□□ 1.78
USF2-202ENST00000343550 KNDC1Q76NI1 1749 aa26.2■■□□□ 1.78
USF2-202ENST00000343550 XPCQ01831 940 aaPredicted RBP26.19■■□□□ 1.78
USF2-202ENST00000343550 MYOM2P54296 1465 aa26.18■■□□□ 1.78
USF2-202ENST00000343550 DCAF11Q8TEB1 546 aa26.18■■□□□ 1.78
USF2-202ENST00000343550 PXDNQ92626 1479 aa26.18■■□□□ 1.78
USF2-202ENST00000343550 KDM2AQ9Y2K7 1162 aa26.16■■□□□ 1.78
USF2-202ENST00000343550 STAC3Q96MF2 364 aa26.15■■□□□ 1.78
USF2-202ENST00000343550 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
USF2-202ENST00000343550 USP21Q9UK80 565 aa26.15■■□□□ 1.78
USF2-202ENST00000343550 FNBP4Q8N3X1 1017 aaPredicted RBP26.14■■□□□ 1.78
USF2-202ENST00000343550 COL22A1Q8NFW1 1626 aaPredicted RBP26.14■■□□□ 1.78
USF2-202ENST00000343550 SIN3AQ96ST3 1273 aa26.14■■□□□ 1.77
USF2-202ENST00000343550 RGS12O14924 1447 aa26.11■■□□□ 1.77
USF2-202ENST00000343550 PRAM1Q96QH2 718 aa26.11■■□□□ 1.77
USF2-202ENST00000343550 TRPC5Q9UL62 973 aaPredicted RBP26.11■■□□□ 1.77
USF2-202ENST00000343550 FMN2Q9NZ56 1722 aa26.1■■□□□ 1.77
USF2-202ENST00000343550 SAFB2Q14151 953 aaKnown RBP eCLIP26.09■■□□□ 1.77
USF2-202ENST00000343550 KRT28Q7Z3Y7 464 aa26.08■■□□□ 1.77
USF2-202ENST00000343550 SPATA31A3Q5VYP0 1347 aa26.07■■□□□ 1.76
USF2-202ENST00000343550 NEUROD1Q13562 356 aa26.07■■□□□ 1.76
USF2-202ENST00000343550 POGKQ9P215 609 aa26.07■■□□□ 1.76
USF2-202ENST00000343550 PHF8Q9UPP1 1060 aa26.06■■□□□ 1.76
USF2-202ENST00000343550 KIF1AQ12756 1690 aa26.04■■□□□ 1.76
USF2-202ENST00000343550 DLC1Q96QB1 1528 aa26.03■■□□□ 1.76
USF2-202ENST00000343550 ATRNO75882 1429 aa26.03■■□□□ 1.76
USF2-202ENST00000343550 PSME1Q06323 249 aa26.02■■□□□ 1.76
USF2-202ENST00000343550 L3MBTL2Q969R5 705 aa26.02■■□□□ 1.76
USF2-202ENST00000343550 TRAK1Q9UPV9 953 aa26.02■■□□□ 1.76
USF2-202ENST00000343550 BCL9LQ86UU0 1499 aa26.02■■□□□ 1.76
USF2-202ENST00000343550 ADGRB1O14514 1584 aa26.01■■□□□ 1.75
USF2-202ENST00000343550 RGPD8O14715 1765 aaPredicted RBP25.98■■□□□ 1.75
USF2-202ENST00000343550 MARF1Q9Y4F3 1742 aaKnown RBP25.96■■□□□ 1.75
USF2-202ENST00000343550 HIRIP3Q9BW71 556 aaPredicted RBP25.96■■□□□ 1.75
USF2-202ENST00000343550 TNS3Q68CZ2 1445 aa25.96■■□□□ 1.75
USF2-202ENST00000343550 ANKARQ7Z5J8 1434 aa25.96■■□□□ 1.75
USF2-202ENST00000343550 PMFBP1Q8TBY8 1022 aa25.95■■□□□ 1.74
USF2-202ENST00000343550 GJD4Q96KN9 370 aaPredicted RBP25.95■■□□□ 1.74
USF2-202ENST00000343550 SBNO1A3KN83 1393 aa25.95■■□□□ 1.74
USF2-202ENST00000343550 ATAD2Q6PL18 1390 aa25.95■■□□□ 1.74
USF2-202ENST00000343550 MINK1Q8N4C8 1332 aaPredicted RBP25.94■■□□□ 1.74
USF2-202ENST00000343550 HAP1P54257 671 aaPredicted RBP25.93■■□□□ 1.74
USF2-202ENST00000343550 UNC5CLQ8IV45 518 aa25.93■■□□□ 1.74
USF2-202ENST00000343550 CABLES1Q8TDN4 633 aa25.93■■□□□ 1.74
USF2-202ENST00000343550 LMOD2Q6P5Q4 547 aa25.93■■□□□ 1.74
USF2-202ENST00000343550 ADGRB2O60241 1585 aa25.92■■□□□ 1.74
USF2-202ENST00000343550 SLIT2O94813 1529 aa25.91■■□□□ 1.74
USF2-202ENST00000343550 PLEKHG5O94827 1062 aa25.91■■□□□ 1.74
USF2-202ENST00000343550 ARHGEF10O15013 1369 aa25.9■■□□□ 1.74
USF2-202ENST00000343550 USP32Q8NFA0 1604 aa25.9■■□□□ 1.74
USF2-202ENST00000343550 WASLO00401 505 aaPredicted RBP25.89■■□□□ 1.74
USF2-202ENST00000343550 EIF3AQ14152 1382 aaKnown RBP25.89■■□□□ 1.73
USF2-202ENST00000343550 PRR36Q9H6K5 1346 aa25.87■■□□□ 1.73
USF2-202ENST00000343550 NBPF1Q3BBV0 1214 aa25.87■■□□□ 1.73
USF2-202ENST00000343550 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.85■■□□□ 1.73
USF2-202ENST00000343550 GPRASP1Q5JY77 1395 aa25.85■■□□□ 1.73
USF2-202ENST00000343550 RALGAPBQ86X10 1494 aa25.84■■□□□ 1.73
USF2-202ENST00000343550 TULP4Q9NRJ4 1543 aa25.84■■□□□ 1.73
USF2-202ENST00000343550 KIAA1210Q9ULL0 1709 aa25.84■■□□□ 1.73
USF2-202ENST00000343550 FAM83GA6ND36 823 aa25.82■■□□□ 1.72
USF2-202ENST00000343550 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
USF2-202ENST00000343550 VPS72Q15906 364 aa25.81■■□□□ 1.72
USF2-202ENST00000343550 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
USF2-202ENST00000343550 EP400Q96L91 3159 aa25.8■■□□□ 1.72
USF2-202ENST00000343550 GLI3P10071 1580 aa25.8■■□□□ 1.72
USF2-202ENST00000343550 NBPF8Q3BBV2 869 aa25.79■■□□□ 1.72
USF2-202ENST00000343550 CCDC125Q86Z20 511 aa25.79■■□□□ 1.72
USF2-202ENST00000343550 CLSPNQ9HAW4 1339 aa25.78■■□□□ 1.72
USF2-202ENST00000343550 NUDT16Q96DE0 195 aaKnown RBP25.78■■□□□ 1.72
USF2-202ENST00000343550 TRPM3Q9HCF6 1732 aaPredicted RBP25.78■■□□□ 1.72
USF2-202ENST00000343550 CCDC9Q9Y3X0 531 aaKnown RBP25.77■■□□□ 1.72
USF2-202ENST00000343550 ARHGEF28Q8N1W1 1705 aaKnown RBP25.76■■□□□ 1.71
USF2-202ENST00000343550 ABCA3Q99758 1704 aa25.76■■□□□ 1.71
USF2-202ENST00000343550 PAK3O75914 559 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms