RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 ADGRB2O60241 1585 aa28.83■■■□□ 2.21
SNX21-201ENST00000342644 NCOA3Q9Y6Q9 1424 aa28.83■■■□□ 2.21
SNX21-201ENST00000342644 C11orf95C9JLR9 678 aaPredicted RBP28.83■■■□□ 2.21
SNX21-201ENST00000342644 ZNF335Q9H4Z2 1342 aaPredicted RBP28.82■■■□□ 2.2
SNX21-201ENST00000342644 CDCA8Q53HL2 280 aa28.81■■■□□ 2.2
SNX21-201ENST00000342644 MINK1Q8N4C8 1332 aaPredicted RBP28.81■■■□□ 2.2
SNX21-201ENST00000342644 DISP3Q9P2K9 1392 aa28.81■■■□□ 2.2
SNX21-201ENST00000342644 PROSER2Q86WR7 435 aaPredicted RBP28.8■■■□□ 2.2
SNX21-201ENST00000342644 PUS7Q96PZ0 661 aaKnown RBP28.8■■■□□ 2.2
SNX21-201ENST00000342644 EVC2Q86UK5 1308 aa28.8■■■□□ 2.2
SNX21-201ENST00000342644 TULP4Q9NRJ4 1543 aa28.8■■■□□ 2.2
SNX21-201ENST00000342644 WASHC2AQ641Q2 1341 aa28.79■■■□□ 2.2
SNX21-201ENST00000342644 CCDC7Q96M83 1385 aa28.79■■■□□ 2.2
SNX21-201ENST00000342644 KIF7Q2M1P5 1343 aa28.78■■■□□ 2.2
SNX21-201ENST00000342644 ADGRL3Q9HAR2 1447 aa28.76■■■□□ 2.19
SNX21-201ENST00000342644 WASLO00401 505 aaPredicted RBP28.74■■■□□ 2.19
SNX21-201ENST00000342644 NALCNQ8IZF0 1738 aa28.74■■■□□ 2.19
SNX21-201ENST00000342644 TMEM94Q12767 1356 aa28.74■■■□□ 2.19
SNX21-201ENST00000342644 LRRC7Q96NW7 1537 aa28.74■■■□□ 2.19
SNX21-201ENST00000342644 CDC42BPGQ6DT37 1551 aa28.71■■■□□ 2.19
SNX21-201ENST00000342644 CDK19Q9BWU1 502 aa28.71■■■□□ 2.19
SNX21-201ENST00000342644 LTBP4Q8N2S1 1624 aa28.71■■■□□ 2.19
SNX21-201ENST00000342644 XIRP1Q702N8 1843 aaKnown RBP28.7■■■□□ 2.18
SNX21-201ENST00000342644 C19orf44Q9H6X5 657 aa28.69■■■□□ 2.18
SNX21-201ENST00000342644 RBM33Q96EV2 1170 aaKnown RBP28.68■■■□□ 2.18
SNX21-201ENST00000342644 ATAD2Q6PL18 1390 aa28.67■■■□□ 2.18
SNX21-201ENST00000342644 SRPK2P78362 688 aaKnown RBP28.67■■■□□ 2.18
SNX21-201ENST00000342644 CABP2Q9NPB3 220 aa28.66■■■□□ 2.18
SNX21-201ENST00000342644 DCCP43146 1447 aa28.66■■■□□ 2.18
SNX21-201ENST00000342644 C14orf37Q86TY3 774 aa28.64■■■□□ 2.18
SNX21-201ENST00000342644 FMN2Q9NZ56 1722 aa28.64■■■□□ 2.18
SNX21-201ENST00000342644 NINLQ9Y2I6 1382 aa28.61■■■□□ 2.17
SNX21-201ENST00000342644 ANKARQ7Z5J8 1434 aa28.61■■■□□ 2.17
SNX21-201ENST00000342644 ATP7BP35670 1465 aa28.61■■■□□ 2.17
SNX21-201ENST00000342644 POLR3GLQ9BT43 218 aa28.61■■■□□ 2.17
SNX21-201ENST00000342644 MSH6P52701 1360 aa28.61■■■□□ 2.17
SNX21-201ENST00000342644 MYOM1P52179 1685 aa28.61■■■□□ 2.17
SNX21-201ENST00000342644 NUDT16Q96DE0 195 aaKnown RBP28.59■■■□□ 2.17
SNX21-201ENST00000342644 CCDC61Q9Y6R9 512 aa28.59■■■□□ 2.17
SNX21-201ENST00000342644 USP32Q8NFA0 1604 aa28.58■■■□□ 2.17
SNX21-201ENST00000342644 PRR36Q9H6K5 1346 aa28.58■■■□□ 2.17
SNX21-201ENST00000342644 CADPS2Q86UW7 1296 aa28.56■■■□□ 2.16
SNX21-201ENST00000342644 TOPAZ1Q8N9V7 1692 aa28.56■■■□□ 2.16
SNX21-201ENST00000342644 DDX10Q13206 875 aaKnown RBP28.55■■■□□ 2.16
SNX21-201ENST00000342644 ITSN1Q15811 1721 aa28.54■■■□□ 2.16
SNX21-201ENST00000342644 ATF3P18847 181 aa28.54■■■□□ 2.16
SNX21-201ENST00000342644 SLC12A5Q9H2X9 1139 aa28.52■■■□□ 2.16
SNX21-201ENST00000342644 TMC1Q8TDI8 760 aa28.51■■■□□ 2.15
SNX21-201ENST00000342644 PPIP5K1Q6PFW1 1433 aa28.51■■■□□ 2.15
SNX21-201ENST00000342644 RGPD8O14715 1765 aaPredicted RBP28.51■■■□□ 2.15
SNX21-201ENST00000342644 CABP1Q9NZU7 370 aa28.5■■■□□ 2.15
SNX21-201ENST00000342644 MST1RQ04912 1400 aa28.49■■■□□ 2.15
SNX21-201ENST00000342644 PLEKHG3A1L390 1219 aa28.49■■■□□ 2.15
SNX21-201ENST00000342644 NUTM2FA1L443 756 aa28.49■■■□□ 2.15
SNX21-201ENST00000342644 ANKRD36BQ8N2N9 1353 aa28.48■■■□□ 2.15
SNX21-201ENST00000342644 C1orf167Q5SNV9 1468 aa28.47■■■□□ 2.15
SNX21-201ENST00000342644 PANK3Q9H999 370 aa28.47■■■□□ 2.15
SNX21-201ENST00000342644 IQSEC2Q5JU85 1478 aa28.46■■■□□ 2.15
SNX21-201ENST00000342644 CD163L1Q9NR16 1453 aa28.46■■■□□ 2.15
SNX21-201ENST00000342644 TERF2IPQ9NYB0 399 aa28.45■■■□□ 2.15
SNX21-201ENST00000342644 CPSF1Q10570 1443 aaKnown RBP28.44■■■□□ 2.14
SNX21-201ENST00000342644 DIEXFQ68CQ4 756 aaKnown RBP28.43■■■□□ 2.14
SNX21-201ENST00000342644 POLR3AO14802 1390 aaPredicted RBP28.42■■■□□ 2.14
SNX21-201ENST00000342644 PER1O15534 1290 aaPredicted RBP28.42■■■□□ 2.14
SNX21-201ENST00000342644 A0A1W2PP64 1363 aa28.41■■■□□ 2.14
SNX21-201ENST00000342644 HDGFL2Q7Z4V5 671 aaPredicted RBP28.41■■■□□ 2.14
SNX21-201ENST00000342644 ZNF692Q9BU19 519 aaPredicted RBP28.41■■■□□ 2.14
SNX21-201ENST00000342644 PHF8Q9UPP1 1060 aa28.4■■■□□ 2.14
SNX21-201ENST00000342644 AKAP12Q02952 1782 aa28.4■■■□□ 2.14
SNX21-201ENST00000342644 ESCO1Q5FWF5 840 aa28.39■■■□□ 2.14
SNX21-201ENST00000342644 SLAIN2Q9P270 581 aa28.39■■■□□ 2.14
SNX21-201ENST00000342644 ACEP12821 1306 aa28.39■■■□□ 2.14
SNX21-201ENST00000342644 KIF1AQ12756 1690 aa28.39■■■□□ 2.14
SNX21-201ENST00000342644 CARD14Q9BXL6 1004 aa28.38■■■□□ 2.13
SNX21-201ENST00000342644 ORAI2Q96SN7 254 aa28.37■■■□□ 2.13
SNX21-201ENST00000342644 MON2Q7Z3U7 1717 aa28.36■■■□□ 2.13
SNX21-201ENST00000342644 PMFBP1Q8TBY8 1022 aa28.36■■■□□ 2.13
SNX21-201ENST00000342644 NGDNQ8NEJ9 315 aaKnown RBP28.34■■■□□ 2.13
SNX21-201ENST00000342644 KTN1Q86UP2 1357 aaKnown RBP28.34■■■□□ 2.13
SNX21-201ENST00000342644 CERKQ8TCT0 537 aa28.33■■■□□ 2.13
SNX21-201ENST00000342644 KNSTRNQ9Y448 316 aa28.33■■■□□ 2.13
SNX21-201ENST00000342644 USP6P35125 1406 aa28.32■■■□□ 2.12
SNX21-201ENST00000342644 EDC4Q6P2E9 1401 aaKnown RBP28.32■■■□□ 2.12
SNX21-201ENST00000342644 NSD3Q9BZ95 1437 aa28.32■■■□□ 2.12
SNX21-201ENST00000342644 BRD4O60885 1362 aaPredicted RBP28.32■■■□□ 2.12
SNX21-201ENST00000342644 NPC1L1Q9UHC9 1359 aa28.3■■■□□ 2.12
SNX21-201ENST00000342644 SSH2Q76I76 1423 aa28.3■■■□□ 2.12
SNX21-201ENST00000342644 BRINP3Q76B58 766 aa28.29■■■□□ 2.12
SNX21-201ENST00000342644 TOM1O60784 492 aa28.28■■■□□ 2.12
SNX21-201ENST00000342644 NRKQ7Z2Y5 1582 aa28.28■■■□□ 2.12
SNX21-201ENST00000342644 AMER1Q5JTC6 1135 aaPredicted RBP28.28■■■□□ 2.12
SNX21-201ENST00000342644 CGNL1Q0VF96 1302 aa28.25■■■□□ 2.11
SNX21-201ENST00000342644 FOXO3O43524 673 aa28.25■■■□□ 2.11
SNX21-201ENST00000342644 NPHP3Q7Z494 1330 aa28.25■■■□□ 2.11
SNX21-201ENST00000342644 PSME1Q06323 249 aa28.23■■■□□ 2.11
SNX21-201ENST00000342644 TTC21BQ7Z4L5 1316 aa28.23■■■□□ 2.11
SNX21-201ENST00000342644 NSD2O96028 1365 aa28.23■■■□□ 2.11
SNX21-201ENST00000342644 TTC21AQ8NDW8 1320 aa28.22■■■□□ 2.11
SNX21-201ENST00000342644 ROBO1Q9Y6N7 1651 aa28.2■■■□□ 2.1
SNX21-201ENST00000342644 NHSL1Q5SYE7 1610 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms