RNA–Protein interactions for RNA: ENST00000341441.9

MEST-202, mesoderm specific transcript, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MEST, Length 2,443 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-202ENST00000341441 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
MEST-202ENST00000341441 CFAP65Q6ZU64 1925 aaKnown RBP22.15■■□□□ 1.14
MEST-202ENST00000341441 GGT6Q6P531 493 aa22.15■■□□□ 1.14
MEST-202ENST00000341441 RUNDC1Q96C34 613 aa22.15■■□□□ 1.14
MEST-202ENST00000341441 NEUROD2Q15784 382 aa22.15■■□□□ 1.14
MEST-202ENST00000341441 NINLQ9Y2I6 1382 aa22.14■■□□□ 1.14
MEST-202ENST00000341441 PANK1Q8TE04 598 aa22.14■■□□□ 1.13
MEST-202ENST00000341441 RRP7AQ9Y3A4 280 aaKnown RBP22.14■■□□□ 1.13
MEST-202ENST00000341441 CANXP27824 592 aaKnown RBP22.14■■□□□ 1.13
MEST-202ENST00000341441 DAXXQ9UER7 740 aaPredicted RBP22.14■■□□□ 1.13
MEST-202ENST00000341441 FRMPD1Q5SYB0 1578 aa22.13■■□□□ 1.13
MEST-202ENST00000341441 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
MEST-202ENST00000341441 CLUAP1Q96AJ1 413 aa22.12■■□□□ 1.13
MEST-202ENST00000341441 COG6Q9Y2V7 657 aa22.12■■□□□ 1.13
MEST-202ENST00000341441 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
MEST-202ENST00000341441 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
MEST-202ENST00000341441 IQSEC2Q5JU85 1478 aa22.11■■□□□ 1.13
MEST-202ENST00000341441 POGZQ7Z3K3 1410 aa22.11■■□□□ 1.13
MEST-202ENST00000341441 MTHFSP49914 203 aa22.1■■□□□ 1.13
MEST-202ENST00000341441 FRAT1Q92837 279 aaPredicted RBP22.09■■□□□ 1.13
MEST-202ENST00000341441 MLH3Q9UHC1 1453 aa22.09■■□□□ 1.13
MEST-202ENST00000341441 USP32Q8NFA0 1604 aa22.09■■□□□ 1.13
MEST-202ENST00000341441 RARSP54136 660 aaKnown RBP22.09■■□□□ 1.13
MEST-202ENST00000341441 NFKBIBQ15653 356 aa22.08■■□□□ 1.12
MEST-202ENST00000341441 WDR63Q8IWG1 891 aa22.07■■□□□ 1.12
MEST-202ENST00000341441 CD109Q6YHK3 1445 aa22.07■■□□□ 1.12
MEST-202ENST00000341441 HECW2Q9P2P5 1572 aa22.06■■□□□ 1.12
MEST-202ENST00000341441 ABCC3O15438 1527 aa22.06■■□□□ 1.12
MEST-202ENST00000341441 CFAP53Q96M91 514 aa22.06■■□□□ 1.12
MEST-202ENST00000341441 NPM1P06748 294 aaKnown RBP eCLIP22.06■■□□□ 1.12
MEST-202ENST00000341441 NUTM2DQ5VT03 806 aaPredicted RBP22.05■■□□□ 1.12
MEST-202ENST00000341441 CCDC27Q2M243 656 aa22.04■■□□□ 1.12
MEST-202ENST00000341441 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
MEST-202ENST00000341441 GLI2P10070 1586 aa22.04■■□□□ 1.12
MEST-202ENST00000341441 EVC2Q86UK5 1308 aa22.04■■□□□ 1.12
MEST-202ENST00000341441 MAPK8IP3Q9UPT6 1336 aa22.04■■□□□ 1.12
MEST-202ENST00000341441 CFAP74Q9C0B2 1584 aa22.03■■□□□ 1.12
MEST-202ENST00000341441 TULP4Q9NRJ4 1543 aa22.02■■□□□ 1.12
MEST-202ENST00000341441 ANKRD36BQ8N2N9 1353 aa22.02■■□□□ 1.12
MEST-202ENST00000341441 RLBP1P12271 317 aa22.02■■□□□ 1.12
MEST-202ENST00000341441 TNNQ9UQP3 1299 aa22.01■■□□□ 1.11
MEST-202ENST00000341441 VIRMAQ69YN4 1812 aaKnown RBP22.01■■□□□ 1.11
MEST-202ENST00000341441 USP19O94966 1318 aa22.01■■□□□ 1.11
MEST-202ENST00000341441 VGFO15240 615 aaPredicted RBP22.01■■□□□ 1.11
MEST-202ENST00000341441 AAMPQ13685 434 aa22■■□□□ 1.11
MEST-202ENST00000341441 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
MEST-202ENST00000341441 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
MEST-202ENST00000341441 NSD2O96028 1365 aa22■■□□□ 1.11
MEST-202ENST00000341441 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
MEST-202ENST00000341441 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
MEST-202ENST00000341441 PCDHB15Q9Y5E8 787 aa21.99■■□□□ 1.11
MEST-202ENST00000341441 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
MEST-202ENST00000341441 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
MEST-202ENST00000341441 PMFBP1Q8TBY8 1022 aa21.99■■□□□ 1.11
MEST-202ENST00000341441 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
MEST-202ENST00000341441 NEXMIFQ5QGS0 1516 aa21.98■■□□□ 1.11
MEST-202ENST00000341441 SEC24BO95487 1268 aa21.98■■□□□ 1.11
MEST-202ENST00000341441 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
MEST-202ENST00000341441 NCBP3Q53F19 620 aaKnown RBP21.97■■□□□ 1.11
MEST-202ENST00000341441 MYH16Q9H6N6 1097 aa21.97■■□□□ 1.11
MEST-202ENST00000341441 GSE1Q14687 1217 aa21.97■■□□□ 1.11
MEST-202ENST00000341441 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.1
MEST-202ENST00000341441 RAPGEF3O95398 923 aa21.95■■□□□ 1.1
MEST-202ENST00000341441 IL27Q8NEV9 243 aa21.93■■□□□ 1.1
MEST-202ENST00000341441 ADGRB2O60241 1585 aa21.92■■□□□ 1.1
MEST-202ENST00000341441 IDI1Q13907 227 aa21.92■■□□□ 1.1
MEST-202ENST00000341441 A0A1W2PP64 1363 aa21.91■■□□□ 1.1
MEST-202ENST00000341441 FRAT2O75474 233 aaPredicted RBP21.91■■□□□ 1.1
MEST-202ENST00000341441 PDZRN3Q9UPQ7 1066 aa21.91■■□□□ 1.1
MEST-202ENST00000341441 ABCC11Q96J66 1382 aa21.91■■□□□ 1.1
MEST-202ENST00000341441 STK26Q9P289 416 aa21.9■■□□□ 1.1
MEST-202ENST00000341441 RWDD1Q9H446 243 aaPredicted RBP21.9■■□□□ 1.1
MEST-202ENST00000341441 NLRP1Q9C000 1473 aa21.9■■□□□ 1.1
MEST-202ENST00000341441 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
MEST-202ENST00000341441 MVPQ14764 893 aaKnown RBP21.89■■□□□ 1.09
MEST-202ENST00000341441 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
MEST-202ENST00000341441 ARHGAP31Q2M1Z3 1444 aa21.88■■□□□ 1.09
MEST-202ENST00000341441 ZKSCAN2Q63HK3 967 aa21.88■■□□□ 1.09
MEST-202ENST00000341441 TSR2Q969E8 191 aaKnown RBP21.88■■□□□ 1.09
MEST-202ENST00000341441 GGNBP2Q9H3C7 697 aa21.88■■□□□ 1.09
MEST-202ENST00000341441 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
MEST-202ENST00000341441 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
MEST-202ENST00000341441 PLEKHF1Q96S99 279 aa21.88■■□□□ 1.09
MEST-202ENST00000341441 DIP2CQ9Y2E4 1556 aa21.88■■□□□ 1.09
MEST-202ENST00000341441 U2SURPO15042 1029 aaKnown RBP21.87■■□□□ 1.09
MEST-202ENST00000341441 NEO1Q92859 1461 aa21.87■■□□□ 1.09
MEST-202ENST00000341441 CT47B1P0C2W7 299 aaPredicted RBP21.86■■□□□ 1.09
MEST-202ENST00000341441 DZIP1LQ8IYY4 767 aaKnown RBP21.86■■□□□ 1.09
MEST-202ENST00000341441 TMPOP42166 694 aaKnown RBP21.86■■□□□ 1.09
MEST-202ENST00000341441 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
MEST-202ENST00000341441 COL3A1P02461 1466 aaPredicted RBP21.85■■□□□ 1.09
MEST-202ENST00000341441 EXOSC9Q06265 439 aaKnown RBP21.85■■□□□ 1.09
MEST-202ENST00000341441 BECN1Q14457 450 aa21.85■■□□□ 1.09
MEST-202ENST00000341441 FTSJ3Q8IY81 847 aaKnown RBP21.85■■□□□ 1.09
MEST-202ENST00000341441 TRIM35Q9UPQ4 493 aa21.85■■□□□ 1.09
MEST-202ENST00000341441 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
MEST-202ENST00000341441 FYB1O15117 783 aa21.83■■□□□ 1.09
MEST-202ENST00000341441 SMC4Q9NTJ3 1288 aa21.83■■□□□ 1.09
MEST-202ENST00000341441 MINK1Q8N4C8 1332 aaPredicted RBP21.82■■□□□ 1.08
MEST-202ENST00000341441 PTPRMP28827 1452 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms