RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 POLR3AO14802 1390 aaPredicted RBP26.48■■□□□ 1.83
SPG7-202ENST00000341316 TNNT2P45379 298 aaPredicted RBP26.48■■□□□ 1.83
SPG7-202ENST00000341316 SLFN5Q08AF3 891 aa26.47■■□□□ 1.83
SPG7-202ENST00000341316 SAFB2Q14151 953 aaKnown RBP eCLIP26.47■■□□□ 1.835e-8■□□□□ 11
SPG7-202ENST00000341316 CRBNQ96SW2 442 aa26.47■■□□□ 1.83
SPG7-202ENST00000341316 SPINK5Q9NQ38 1064 aaPredicted RBP26.47■■□□□ 1.83
SPG7-202ENST00000341316 EVC2Q86UK5 1308 aa26.47■■□□□ 1.83
SPG7-202ENST00000341316 NOP58Q9Y2X3 529 aaKnown RBP26.46■■□□□ 1.83
SPG7-202ENST00000341316 C20orf194Q5TEA3 1177 aa26.46■■□□□ 1.83
SPG7-202ENST00000341316 STK26Q9P289 416 aa26.45■■□□□ 1.83
SPG7-202ENST00000341316 CABP2Q9NPB3 220 aa26.45■■□□□ 1.82
SPG7-202ENST00000341316 TRMT2AQ8IZ69 625 aaKnown RBP26.44■■□□□ 1.82
SPG7-202ENST00000341316 PUS7Q96PZ0 661 aaKnown RBP26.44■■□□□ 1.82
SPG7-202ENST00000341316 USP32Q8NFA0 1604 aa26.42■■□□□ 1.82
SPG7-202ENST00000341316 DMRT2Q9Y5R5 561 aa26.41■■□□□ 1.82
SPG7-202ENST00000341316 SHPRHQ149N8 1683 aa26.4■■□□□ 1.82
SPG7-202ENST00000341316 ANKRD36BQ8N2N9 1353 aa26.4■■□□□ 1.82
SPG7-202ENST00000341316 PAK3O75914 559 aaPredicted RBP26.4■■□□□ 1.82
SPG7-202ENST00000341316 CGNL1Q0VF96 1302 aa26.39■■□□□ 1.82
SPG7-202ENST00000341316 PTPRMP28827 1452 aa26.38■■□□□ 1.81
SPG7-202ENST00000341316 MTHFSP49914 203 aa26.36■■□□□ 1.81
SPG7-202ENST00000341316 ANP32AP39687 249 aaKnown RBP26.35■■□□□ 1.81
SPG7-202ENST00000341316 REREQ9P2R6 1566 aa26.35■■□□□ 1.81
SPG7-202ENST00000341316 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
SPG7-202ENST00000341316 PRAM1Q96QH2 718 aa26.34■■□□□ 1.81
SPG7-202ENST00000341316 AGLP35573 1532 aa26.33■■□□□ 1.81
SPG7-202ENST00000341316 NKTRP30414 1462 aaKnown RBP26.32■■□□□ 1.8
SPG7-202ENST00000341316 SRPK2P78362 688 aaKnown RBP26.32■■□□□ 1.8
SPG7-202ENST00000341316 E9PSI1 815 aa26.32■■□□□ 1.8
SPG7-202ENST00000341316 MINK1Q8N4C8 1332 aaPredicted RBP26.32■■□□□ 1.8
SPG7-202ENST00000341316 A0A1W2PP64 1363 aa26.32■■□□□ 1.8
SPG7-202ENST00000341316 ALKQ9UM73 1620 aa26.31■■□□□ 1.8
SPG7-202ENST00000341316 CLTCQ00610 1675 aaKnown RBP26.31■■□□□ 1.8
SPG7-202ENST00000341316 WWC1Q8IX03 1113 aa26.31■■□□□ 1.8
SPG7-202ENST00000341316 IPO9Q96P70 1041 aaKnown RBP26.31■■□□□ 1.8
SPG7-202ENST00000341316 MLECQ14165 292 aa26.3■■□□□ 1.8
SPG7-202ENST00000341316 NGEFQ8N5V2 710 aa26.3■■□□□ 1.8
SPG7-202ENST00000341316 STAG3Q9UJ98 1225 aa26.3■■□□□ 1.8
SPG7-202ENST00000341316 NSD2O96028 1365 aa26.29■■□□□ 1.8
SPG7-202ENST00000341316 RUNDC1Q96C34 613 aa26.27■■□□□ 1.8
SPG7-202ENST00000341316 POGKQ9P215 609 aa26.27■■□□□ 1.8
SPG7-202ENST00000341316 PPP6R1Q9UPN7 881 aa26.27■■□□□ 1.8
SPG7-202ENST00000341316 RRP7AQ9Y3A4 280 aaKnown RBP26.27■■□□□ 1.8
SPG7-202ENST00000341316 TCERG1O14776 1098 aaKnown RBP26.27■■□□□ 1.8
SPG7-202ENST00000341316 NBR1Q14596 966 aa26.27■■□□□ 1.8
SPG7-202ENST00000341316 SKAP1Q86WV1 359 aa26.27■■□□□ 1.8
SPG7-202ENST00000341316 ABCC11Q96J66 1382 aa26.26■■□□□ 1.8
SPG7-202ENST00000341316 BCAR3O75815 825 aa26.26■■□□□ 1.79
SPG7-202ENST00000341316 IQSEC2Q5JU85 1478 aa26.26■■□□□ 1.79
SPG7-202ENST00000341316 NEUROD2Q15784 382 aa26.25■■□□□ 1.79
SPG7-202ENST00000341316 TCP11L2Q8N4U5 519 aa26.25■■□□□ 1.79
SPG7-202ENST00000341316 NINLQ9Y2I6 1382 aa26.25■■□□□ 1.79
SPG7-202ENST00000341316 A2ML1A8K2U0 1454 aa26.25■■□□□ 1.79
SPG7-202ENST00000341316 CD163L1Q9NR16 1453 aa26.24■■□□□ 1.79
SPG7-202ENST00000341316 DEKP35659 375 aaKnown RBP26.24■■□□□ 1.79
SPG7-202ENST00000341316 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.24■■□□□ 1.79
SPG7-202ENST00000341316 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
SPG7-202ENST00000341316 CFAP53Q96M91 514 aa26.23■■□□□ 1.79
SPG7-202ENST00000341316 ATAD2Q6PL18 1390 aa26.23■■□□□ 1.79
SPG7-202ENST00000341316 GGNBP2Q9H3C7 697 aa26.22■■□□□ 1.79
SPG7-202ENST00000341316 KDM2BQ8NHM5 1336 aa26.22■■□□□ 1.79
SPG7-202ENST00000341316 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
SPG7-202ENST00000341316 ZBTB47Q9UFB7 747 aaPredicted RBP26.21■■□□□ 1.79
SPG7-202ENST00000341316 CDK19Q9BWU1 502 aa26.2■■□□□ 1.78
SPG7-202ENST00000341316 ARHGEF40Q8TER5 1519 aa26.2■■□□□ 1.78
SPG7-202ENST00000341316 RIMS2Q9UQ26 1411 aa26.19■■□□□ 1.78
SPG7-202ENST00000341316 FYB1O15117 783 aa26.18■■□□□ 1.78
SPG7-202ENST00000341316 PDE4AP27815 886 aa26.17■■□□□ 1.78
SPG7-202ENST00000341316 TERF2IPQ9NYB0 399 aa26.17■■□□□ 1.78
SPG7-202ENST00000341316 NLRP1Q9C000 1473 aa26.17■■□□□ 1.78
SPG7-202ENST00000341316 MS4A1P11836 297 aa26.17■■□□□ 1.78
SPG7-202ENST00000341316 WAPLQ7Z5K2 1190 aa26.17■■□□□ 1.78
SPG7-202ENST00000341316 U2AF1L5P0DN76 240 aaPredicted RBP26.16■■□□□ 1.78
SPG7-202ENST00000341316 U2AF1Q01081 240 aaKnown RBP eCLIP26.16■■□□□ 1.781e-21■■□□□ 12.5
SPG7-202ENST00000341316 CABP1Q9NZU7 370 aa26.14■■□□□ 1.78
SPG7-202ENST00000341316 SETD1AO15047 1707 aaKnown RBP26.14■■□□□ 1.77
SPG7-202ENST00000341316 KIF13AQ9H1H9 1805 aa26.14■■□□□ 1.77
SPG7-202ENST00000341316 BACH2Q9BYV9 841 aa26.13■■□□□ 1.77
SPG7-202ENST00000341316 NPM2Q86SE8 214 aaKnown RBP26.12■■□□□ 1.77
SPG7-202ENST00000341316 WDR63Q8IWG1 891 aa26.12■■□□□ 1.77
SPG7-202ENST00000341316 COL3A1P02461 1466 aaPredicted RBP26.12■■□□□ 1.77
SPG7-202ENST00000341316 CCDC27Q2M243 656 aa26.12■■□□□ 1.77
SPG7-202ENST00000341316 CENPQQ7L2Z9 268 aaPredicted RBP26.12■■□□□ 1.77
SPG7-202ENST00000341316 DLC1Q96QB1 1528 aa26.11■■□□□ 1.77
SPG7-202ENST00000341316 MED14O60244 1454 aa26.1■■□□□ 1.77
SPG7-202ENST00000341316 ZMYM3Q14202 1370 aa26.1■■□□□ 1.77
SPG7-202ENST00000341316 HDGFL2Q7Z4V5 671 aaPredicted RBP26.09■■□□□ 1.77
SPG7-202ENST00000341316 ANKRD26Q9UPS8 1709 aa26.08■■□□□ 1.77
SPG7-202ENST00000341316 ADGRB2O60241 1585 aa26.08■■□□□ 1.77
SPG7-202ENST00000341316 NRXN3Q9Y4C0 1643 aa26.08■■□□□ 1.77
SPG7-202ENST00000341316 PLEKHF1Q96S99 279 aa26.07■■□□□ 1.76
SPG7-202ENST00000341316 METP08581 1390 aa26.06■■□□□ 1.76
SPG7-202ENST00000341316 U2SURPO15042 1029 aaKnown RBP26.06■■□□□ 1.76
SPG7-202ENST00000341316 RARSP54136 660 aaKnown RBP26.06■■□□□ 1.76
SPG7-202ENST00000341316 PDE3AQ14432 1141 aa26.05■■□□□ 1.76
SPG7-202ENST00000341316 PANK1Q8TE04 598 aa26.04■■□□□ 1.76
SPG7-202ENST00000341316 NCBP3Q53F19 620 aaKnown RBP26.04■■□□□ 1.76
SPG7-202ENST00000341316 ESF1Q9H501 851 aaKnown RBP26.03■■□□□ 1.76
SPG7-202ENST00000341316 RTL5Q5HYW3 569 aaPredicted RBP26.02■■□□□ 1.76
SPG7-202ENST00000341316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms