RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 IFIT2P09913 472 aaKnown RBP23.71■■□□□ 1.39
SH2B3-201ENST00000341259 ATF3P18847 181 aa23.71■■□□□ 1.39
SH2B3-201ENST00000341259 CABP1Q9NZU7 370 aa23.71■■□□□ 1.39
SH2B3-201ENST00000341259 EXOSC9Q06265 439 aaKnown RBP23.7■■□□□ 1.38
SH2B3-201ENST00000341259 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
SH2B3-201ENST00000341259 KIF3AQ9Y496 699 aa23.7■■□□□ 1.38
SH2B3-201ENST00000341259 FRAT2O75474 233 aaPredicted RBP23.7■■□□□ 1.38
SH2B3-201ENST00000341259 RAPGEF4Q8WZA2 1011 aa23.7■■□□□ 1.38
SH2B3-201ENST00000341259 PHF14O94880 888 aa23.68■■□□□ 1.38
SH2B3-201ENST00000341259 TPM4P67936 248 aa23.67■■□□□ 1.38
SH2B3-201ENST00000341259 SMG6Q86US8 1419 aaKnown RBP23.67■■□□□ 1.38
SH2B3-201ENST00000341259 ABTB2Q8N961 1025 aa23.66■■□□□ 1.38
SH2B3-201ENST00000341259 G3BP1Q13283 466 aaKnown RBP eCLIP23.66■■□□□ 1.38
SH2B3-201ENST00000341259 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
SH2B3-201ENST00000341259 ZNF608Q9ULD9 1512 aaPredicted RBP23.65■■□□□ 1.38
SH2B3-201ENST00000341259 GAS2L2Q8NHY3 880 aa23.65■■□□□ 1.38
SH2B3-201ENST00000341259 DDX49Q9Y6V7 483 aaKnown RBP23.65■■□□□ 1.38
SH2B3-201ENST00000341259 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
SH2B3-201ENST00000341259 H3BQV1 296 aa23.64■■□□□ 1.38
SH2B3-201ENST00000341259 IFFO2Q5TF58 517 aa23.64■■□□□ 1.38
SH2B3-201ENST00000341259 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.38
SH2B3-201ENST00000341259 SKOR2Q2VWA4 1001 aaPredicted RBP23.64■■□□□ 1.37
SH2B3-201ENST00000341259 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.37
SH2B3-201ENST00000341259 TSR2Q969E8 191 aaKnown RBP23.63■■□□□ 1.37
SH2B3-201ENST00000341259 BCAR3O75815 825 aa23.63■■□□□ 1.37
SH2B3-201ENST00000341259 GSE1Q14687 1217 aa23.63■■□□□ 1.37
SH2B3-201ENST00000341259 C22orf23Q9BZE7 217 aa23.63■■□□□ 1.37
SH2B3-201ENST00000341259 HSP90AB4PQ58FF6 505 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 CCDC34Q96HJ3 373 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 ANO2Q9NQ90 1003 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 PDE3AQ14432 1141 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 NCOA1Q15788 1441 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 ZKSCAN1P17029 563 aaPredicted RBP23.62■■□□□ 1.37
SH2B3-201ENST00000341259 ESCO1Q5FWF5 840 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 FAM184AQ8NB25 1140 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 ZNF692Q9BU19 519 aaPredicted RBP23.62■■□□□ 1.37
SH2B3-201ENST00000341259 ATP6V1DQ9Y5K8 247 aa23.62■■□□□ 1.37
SH2B3-201ENST00000341259 LRRFIP1Q32MZ4 808 aaKnown RBP23.61■■□□□ 1.37
SH2B3-201ENST00000341259 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
SH2B3-201ENST00000341259 FOXD4L6Q3SYB3 417 aaPredicted RBP23.61■■□□□ 1.37
SH2B3-201ENST00000341259 FOXD4L3Q6VB84 417 aaPredicted RBP23.61■■□□□ 1.37
SH2B3-201ENST00000341259 G3V3G9 751 aa23.61■■□□□ 1.37
SH2B3-201ENST00000341259 DCAF8Q5TAQ9 597 aa23.61■■□□□ 1.37
SH2B3-201ENST00000341259 UBTFL1P0CB47 393 aaPredicted RBP23.6■■□□□ 1.37
SH2B3-201ENST00000341259 SF3A1Q15459 793 aaKnown RBP23.6■■□□□ 1.37
SH2B3-201ENST00000341259 WDR63Q8IWG1 891 aa23.6■■□□□ 1.37
SH2B3-201ENST00000341259 THEMISQ8N1K5 641 aaPredicted RBP23.6■■□□□ 1.37
SH2B3-201ENST00000341259 CHMP5Q9NZZ3 219 aa23.6■■□□□ 1.37
SH2B3-201ENST00000341259 ATAD2Q6PL18 1390 aa23.6■■□□□ 1.37
SH2B3-201ENST00000341259 C11orf95C9JLR9 678 aaPredicted RBP23.6■■□□□ 1.37
SH2B3-201ENST00000341259 SYTL4Q96C24 671 aaPredicted RBP23.6■■□□□ 1.37
SH2B3-201ENST00000341259 RIC3Q7Z5B4 369 aa23.59■■□□□ 1.37
SH2B3-201ENST00000341259 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
SH2B3-201ENST00000341259 AIMP1Q12904 312 aaKnown RBP23.59■■□□□ 1.37
SH2B3-201ENST00000341259 CCDC30Q5VVM6 783 aa23.59■■□□□ 1.37
SH2B3-201ENST00000341259 CHMP4CQ96CF2 233 aa23.59■■□□□ 1.37
SH2B3-201ENST00000341259 ADGRL1O94910 1474 aa23.58■■□□□ 1.37
SH2B3-201ENST00000341259 CDC45O75419 566 aa23.58■■□□□ 1.37
SH2B3-201ENST00000341259 NSD3Q9BZ95 1437 aa23.58■■□□□ 1.37
SH2B3-201ENST00000341259 CD109Q6YHK3 1445 aa23.58■■□□□ 1.37
SH2B3-201ENST00000341259 CLSTN1O94985 981 aa23.57■■□□□ 1.36
SH2B3-201ENST00000341259 PDZRN3Q9UPQ7 1066 aa23.57■■□□□ 1.36
SH2B3-201ENST00000341259 SULT6B1Q6IMI4 303 aa23.56■■□□□ 1.36
SH2B3-201ENST00000341259 THOC2Q8NI27 1593 aaKnown RBP23.56■■□□□ 1.36
SH2B3-201ENST00000341259 ERC2O15083 957 aa23.56■■□□□ 1.36
SH2B3-201ENST00000341259 RASSF8Q8NHQ8 419 aa23.55■■□□□ 1.36
SH2B3-201ENST00000341259 PLEKHO1Q53GL0 409 aaPredicted RBP23.54■■□□□ 1.36
SH2B3-201ENST00000341259 NINLQ9Y2I6 1382 aa23.54■■□□□ 1.36
SH2B3-201ENST00000341259 RPRD2Q5VT52 1461 aaKnown RBP23.53■■□□□ 1.36
SH2B3-201ENST00000341259 GNAI3P08754 354 aa23.53■■□□□ 1.36
SH2B3-201ENST00000341259 RNF20Q5VTR2 975 aa23.53■■□□□ 1.36
SH2B3-201ENST00000341259 C1orf115Q9H7X2 142 aa23.53■■□□□ 1.36
SH2B3-201ENST00000341259 PROSER2Q86WR7 435 aaPredicted RBP23.53■■□□□ 1.36
SH2B3-201ENST00000341259 CT47B1P0C2W7 299 aaPredicted RBP23.52■■□□□ 1.36
SH2B3-201ENST00000341259 SLC26A8Q96RN1 970 aa23.5■■□□□ 1.35
SH2B3-201ENST00000341259 MCTP1Q6DN14 999 aa23.5■■□□□ 1.35
SH2B3-201ENST00000341259 FAM135AQ9P2D6 1515 aa23.5■■□□□ 1.35
SH2B3-201ENST00000341259 SYNE3Q6ZMZ3 975 aa23.49■■□□□ 1.35
SH2B3-201ENST00000341259 GCC1Q96CN9 775 aa23.48■■□□□ 1.35
SH2B3-201ENST00000341259 RRS1Q15050 365 aaKnown RBP23.48■■□□□ 1.35
SH2B3-201ENST00000341259 SLC4A2P04920 1241 aa23.47■■□□□ 1.35
SH2B3-201ENST00000341259 APPP05067 770 aa23.47■■□□□ 1.35
SH2B3-201ENST00000341259 AKAP17AQ02040 695 aaKnown RBP23.47■■□□□ 1.35
SH2B3-201ENST00000341259 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
SH2B3-201ENST00000341259 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
SH2B3-201ENST00000341259 RAPGEF6Q8TEU7 1601 aa23.46■■□□□ 1.35
SH2B3-201ENST00000341259 NUCB2P80303 420 aa23.46■■□□□ 1.35
SH2B3-201ENST00000341259 ATF7IPQ6VMQ6 1270 aa23.46■■□□□ 1.35
SH2B3-201ENST00000341259 WWC1Q8IX03 1113 aa23.46■■□□□ 1.35
SH2B3-201ENST00000341259 UGGT2Q9NYU1 1516 aa23.45■■□□□ 1.35
SH2B3-201ENST00000341259 MVPQ14764 893 aaKnown RBP23.45■■□□□ 1.34
SH2B3-201ENST00000341259 POGZQ7Z3K3 1410 aa23.45■■□□□ 1.34
SH2B3-201ENST00000341259 SURF6O75683 361 aaKnown RBP23.45■■□□□ 1.34
SH2B3-201ENST00000341259 FCHSD2O94868 740 aa23.45■■□□□ 1.34
SH2B3-201ENST00000341259 CPLX2Q6PUV4 134 aaKnown RBP23.45■■□□□ 1.34
SH2B3-201ENST00000341259 NEUROD6Q96NK8 337 aa23.45■■□□□ 1.34
SH2B3-201ENST00000341259 ADGRF5Q8IZF2 1346 aa23.45■■□□□ 1.34
SH2B3-201ENST00000341259 NUDT16Q96DE0 195 aaKnown RBP23.44■■□□□ 1.34
SH2B3-201ENST00000341259 GNAI2P04899 355 aa23.44■■□□□ 1.34
SH2B3-201ENST00000341259 SMC3Q9UQE7 1217 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms