RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 SLFN5Q08AF3 891 aa10.32□□□□□ -0.76
NBR1-201ENST00000341165 NSD3Q9BZ95 1437 aa10.32□□□□□ -0.76
NBR1-201ENST00000341165 ABCC3O15438 1527 aa10.32□□□□□ -0.76
NBR1-201ENST00000341165 POLR3AO14802 1390 aaPredicted RBP10.32□□□□□ -0.76
NBR1-201ENST00000341165 TMEM132EQ6IEE7 984 aa10.31□□□□□ -0.76
NBR1-201ENST00000341165 CENPQQ7L2Z9 268 aaPredicted RBP10.31□□□□□ -0.76
NBR1-201ENST00000341165 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
NBR1-201ENST00000341165 PLIN1O60240 522 aa10.31□□□□□ -0.76
NBR1-201ENST00000341165 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
NBR1-201ENST00000341165 DUSP27Q5VZP5 1158 aa10.3□□□□□ -0.76
NBR1-201ENST00000341165 HDGFL2Q7Z4V5 671 aaPredicted RBP10.3□□□□□ -0.76
NBR1-201ENST00000341165 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
NBR1-201ENST00000341165 ARHGAP31Q2M1Z3 1444 aa10.3□□□□□ -0.76
NBR1-201ENST00000341165 HDGFP51858 240 aaKnown RBP10.3□□□□□ -0.76
NBR1-201ENST00000341165 CYB5RLQ6IPT4 315 aa10.29□□□□□ -0.76
NBR1-201ENST00000341165 SLC12A5Q9H2X9 1139 aa10.29□□□□□ -0.76
NBR1-201ENST00000341165 MYH16Q9H6N6 1097 aa10.29□□□□□ -0.76
NBR1-201ENST00000341165 STK26Q9P289 416 aa10.29□□□□□ -0.76
NBR1-201ENST00000341165 NKTRP30414 1462 aaKnown RBP10.29□□□□□ -0.76
NBR1-201ENST00000341165 FAM69CQ0P6D2 419 aa10.28□□□□□ -0.76
NBR1-201ENST00000341165 ATAD2Q6PL18 1390 aa10.28□□□□□ -0.76
NBR1-201ENST00000341165 PDE4CQ08493 712 aa10.28□□□□□ -0.76
NBR1-201ENST00000341165 AAMPQ13685 434 aa10.28□□□□□ -0.76
NBR1-201ENST00000341165 NUTM2DQ5VT03 806 aaPredicted RBP10.28□□□□□ -0.76
NBR1-201ENST00000341165 CARD14Q9BXL6 1004 aa10.28□□□□□ -0.76
NBR1-201ENST00000341165 IDI1Q13907 227 aa10.28□□□□□ -0.76
NBR1-201ENST00000341165 PLEKHH1Q9ULM0 1364 aa10.28□□□□□ -0.76
NBR1-201ENST00000341165 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.76
NBR1-201ENST00000341165 PDE4AP27815 886 aa10.27□□□□□ -0.76
NBR1-201ENST00000341165 ANKRD36BQ8N2N9 1353 aa10.27□□□□□ -0.77
NBR1-201ENST00000341165 MYO3AQ8NEV4 1616 aa10.27□□□□□ -0.77
NBR1-201ENST00000341165 ZFYVE9O95405 1425 aa10.27□□□□□ -0.77
NBR1-201ENST00000341165 CAMSAP1Q5T5Y3 1602 aa10.26□□□□□ -0.77
NBR1-201ENST00000341165 SAFB2Q14151 953 aaKnown RBP eCLIP10.26□□□□□ -0.77
NBR1-201ENST00000341165 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
NBR1-201ENST00000341165 WDR63Q8IWG1 891 aa10.26□□□□□ -0.77
NBR1-201ENST00000341165 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
NBR1-201ENST00000341165 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
NBR1-201ENST00000341165 ZNF521Q96K83 1311 aa10.26□□□□□ -0.77
NBR1-201ENST00000341165 ZC3H13Q5T200 1668 aaKnown RBP10.26□□□□□ -0.77
NBR1-201ENST00000341165 MSH5O43196 834 aa10.26□□□□□ -0.77
NBR1-201ENST00000341165 MTHFSP49914 203 aa10.25□□□□□ -0.77
NBR1-201ENST00000341165 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
NBR1-201ENST00000341165 NCBP3Q53F19 620 aaKnown RBP10.25□□□□□ -0.77
NBR1-201ENST00000341165 FRMPD1Q5SYB0 1578 aa10.25□□□□□ -0.77
NBR1-201ENST00000341165 CABP2Q9NPB3 220 aa10.25□□□□□ -0.77
NBR1-201ENST00000341165 IFT172Q9UG01 1749 aa10.25□□□□□ -0.77
NBR1-201ENST00000341165 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.25□□□□□ -0.77
NBR1-201ENST00000341165 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
NBR1-201ENST00000341165 UBE2Q2Q8WVN8 375 aa10.24□□□□□ -0.77
NBR1-201ENST00000341165 DIP2CQ9Y2E4 1556 aa10.24□□□□□ -0.77
NBR1-201ENST00000341165 WWC1Q8IX03 1113 aa10.24□□□□□ -0.77
NBR1-201ENST00000341165 PPLO60437 1756 aa10.23□□□□□ -0.77
NBR1-201ENST00000341165 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
NBR1-201ENST00000341165 MYOM1P52179 1685 aa10.23□□□□□ -0.77
NBR1-201ENST00000341165 U2SURPO15042 1029 aaKnown RBP10.23□□□□□ -0.77
NBR1-201ENST00000341165 TRMT2AQ8IZ69 625 aaKnown RBP10.23□□□□□ -0.77
NBR1-201ENST00000341165 BACH2Q9BYV9 841 aa10.23□□□□□ -0.77
NBR1-201ENST00000341165 PMFBP1Q8TBY8 1022 aa10.23□□□□□ -0.77
NBR1-201ENST00000341165 CT47B1P0C2W7 299 aaPredicted RBP10.22□□□□□ -0.77
NBR1-201ENST00000341165 QRICH2Q9H0J4 1663 aa10.22□□□□□ -0.77
NBR1-201ENST00000341165 MINK1Q8N4C8 1332 aaPredicted RBP10.22□□□□□ -0.77
NBR1-201ENST00000341165 CCDC27Q2M243 656 aa10.22□□□□□ -0.77
NBR1-201ENST00000341165 PRAM1Q96QH2 718 aa10.22□□□□□ -0.77
NBR1-201ENST00000341165 FRAT1Q92837 279 aaPredicted RBP10.22□□□□□ -0.77
NBR1-201ENST00000341165 GLI2P10070 1586 aa10.22□□□□□ -0.77
NBR1-201ENST00000341165 ADGRB1O14514 1584 aa10.21□□□□□ -0.77
NBR1-201ENST00000341165 PPM1GO15355 546 aaPredicted RBP10.21□□□□□ -0.78
NBR1-201ENST00000341165 HSP90AA1P07900 732 aaKnown RBP10.21□□□□□ -0.78
NBR1-201ENST00000341165 FAM161AQ3B820 660 aa10.21□□□□□ -0.78
NBR1-201ENST00000341165 YEATS2Q9ULM3 1422 aa10.2□□□□□ -0.78
NBR1-201ENST00000341165 FTSJ3Q8IY81 847 aaKnown RBP10.2□□□□□ -0.78
NBR1-201ENST00000341165 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
NBR1-201ENST00000341165 RRP7AQ9Y3A4 280 aaKnown RBP10.2□□□□□ -0.78
NBR1-201ENST00000341165 CALD1Q05682 793 aaKnown RBP10.2□□□□□ -0.78
NBR1-201ENST00000341165 C20orf194Q5TEA3 1177 aa10.2□□□□□ -0.78
NBR1-201ENST00000341165 NEXMIFQ5QGS0 1516 aa10.2□□□□□ -0.78
NBR1-201ENST00000341165 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
NBR1-201ENST00000341165 UPF2Q9HAU5 1272 aaKnown RBP10.19□□□□□ -0.78
NBR1-201ENST00000341165 YTHDC2Q9H6S0 1430 aaKnown RBP10.19□□□□□ -0.78
NBR1-201ENST00000341165 DIAPH1O60610 1272 aaKnown RBP10.19□□□□□ -0.78
NBR1-201ENST00000341165 HSP90AA2PQ14568 343 aaPredicted RBP10.19□□□□□ -0.78
NBR1-201ENST00000341165 SENP3Q9H4L4 574 aaPredicted RBP10.19□□□□□ -0.78
NBR1-201ENST00000341165 MLECQ14165 292 aa10.19□□□□□ -0.78
NBR1-201ENST00000341165 CDK19Q9BWU1 502 aa10.19□□□□□ -0.78
NBR1-201ENST00000341165 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
NBR1-201ENST00000341165 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
NBR1-201ENST00000341165 RWDD1Q9H446 243 aaPredicted RBP10.18□□□□□ -0.78
NBR1-201ENST00000341165 USP32Q8NFA0 1604 aa10.18□□□□□ -0.78
NBR1-201ENST00000341165 BCAR3O75815 825 aa10.18□□□□□ -0.78
NBR1-201ENST00000341165 RGS3P49796 1198 aa10.18□□□□□ -0.78
NBR1-201ENST00000341165 GGNBP2Q9H3C7 697 aa10.18□□□□□ -0.78
NBR1-201ENST00000341165 ABCC11Q96J66 1382 aa10.18□□□□□ -0.78
NBR1-201ENST00000341165 PIK3C2BO00750 1634 aa10.18□□□□□ -0.78
NBR1-201ENST00000341165 IPO8O15397 1037 aaKnown RBP10.17□□□□□ -0.78
NBR1-201ENST00000341165 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
NBR1-201ENST00000341165 KDM2BQ8NHM5 1336 aa10.17□□□□□ -0.78
NBR1-201ENST00000341165 ZKSCAN2Q63HK3 967 aa10.16□□□□□ -0.78
NBR1-201ENST00000341165 A0A1W2PP64 1363 aa10.16□□□□□ -0.78
NBR1-201ENST00000341165 RICTORQ6R327 1708 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms