RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 FOXD1Q16676 465 aa27.07■■□□□ 1.92
IFT27-201ENST00000340630 NPHP3Q7Z494 1330 aa27.05■■□□□ 1.92
IFT27-201ENST00000340630 ATAD2Q6PL18 1390 aa27.05■■□□□ 1.92
IFT27-201ENST00000340630 FOXO3O43524 673 aa27.04■■□□□ 1.92
IFT27-201ENST00000340630 XPCQ01831 940 aaPredicted RBP27.04■■□□□ 1.92
IFT27-201ENST00000340630 STK26Q9P289 416 aa27.04■■□□□ 1.92
IFT27-201ENST00000340630 ADGRF5Q8IZF2 1346 aa27.03■■□□□ 1.92
IFT27-201ENST00000340630 NUTM2FA1L443 756 aa27.02■■□□□ 1.92
IFT27-201ENST00000340630 RGL3Q3MIN7 710 aa27.02■■□□□ 1.92
IFT27-201ENST00000340630 SRCAPQ6ZRS2 3230 aa27.01■■□□□ 1.91
IFT27-201ENST00000340630 WAPLQ7Z5K2 1190 aa27.01■■□□□ 1.91
IFT27-201ENST00000340630 ATRNO75882 1429 aa27■■□□□ 1.91
IFT27-201ENST00000340630 PPLO60437 1756 aa26.99■■□□□ 1.91
IFT27-201ENST00000340630 MYOM2P54296 1465 aa26.98■■□□□ 1.91
IFT27-201ENST00000340630 COL22A1Q8NFW1 1626 aaPredicted RBP26.97■■□□□ 1.91
IFT27-201ENST00000340630 CDC42BPGQ6DT37 1551 aa26.97■■□□□ 1.91
IFT27-201ENST00000340630 PXDNQ92626 1479 aa26.96■■□□□ 1.91
IFT27-201ENST00000340630 TMEM132EQ6IEE7 984 aa26.96■■□□□ 1.91
IFT27-201ENST00000340630 LRPPRCP42704 1394 aaKnown RBP26.96■■□□□ 1.91
IFT27-201ENST00000340630 BCL9LQ86UU0 1499 aa26.94■■□□□ 1.9
IFT27-201ENST00000340630 CCDC144AA2RUR9 1427 aa26.94■■□□□ 1.9
IFT27-201ENST00000340630 GJD4Q96KN9 370 aaPredicted RBP26.92■■□□□ 1.9
IFT27-201ENST00000340630 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
IFT27-201ENST00000340630 PLEKHH1Q9ULM0 1364 aa26.91■■□□□ 1.9
IFT27-201ENST00000340630 ABCC11Q96J66 1382 aa26.9■■□□□ 1.9
IFT27-201ENST00000340630 TECPR2O15040 1411 aa26.9■■□□□ 1.9
IFT27-201ENST00000340630 MPHOSPH9Q99550 1183 aa26.89■■□□□ 1.9
IFT27-201ENST00000340630 ZRANB1Q9UGI0 708 aa26.89■■□□□ 1.9
IFT27-201ENST00000340630 SPATA31E1Q6ZUB1 1445 aa26.89■■□□□ 1.89
IFT27-201ENST00000340630 EP400Q96L91 3159 aa26.88■■□□□ 1.89
IFT27-201ENST00000340630 KRT28Q7Z3Y7 464 aa26.86■■□□□ 1.89
IFT27-201ENST00000340630 CCDC125Q86Z20 511 aa26.86■■□□□ 1.89
IFT27-201ENST00000340630 SPATA31A3Q5VYP0 1347 aa26.86■■□□□ 1.89
IFT27-201ENST00000340630 UNC5CLQ8IV45 518 aa26.85■■□□□ 1.89
IFT27-201ENST00000340630 YTHDC2Q9H6S0 1430 aaKnown RBP26.82■■□□□ 1.88
IFT27-201ENST00000340630 PIK3C2GO75747 1445 aa26.82■■□□□ 1.88
IFT27-201ENST00000340630 PLEKHG5O94827 1062 aa26.81■■□□□ 1.88
IFT27-201ENST00000340630 HAP1P54257 671 aaPredicted RBP26.8■■□□□ 1.88
IFT27-201ENST00000340630 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
IFT27-201ENST00000340630 SIRT1Q96EB6 747 aa26.79■■□□□ 1.88
IFT27-201ENST00000340630 PHF8Q9UPP1 1060 aa26.79■■□□□ 1.88
IFT27-201ENST00000340630 C14orf93Q9H972 538 aaKnown RBP26.78■■□□□ 1.88
IFT27-201ENST00000340630 RALGAPBQ86X10 1494 aa26.78■■□□□ 1.88
IFT27-201ENST00000340630 SLIT2O94813 1529 aa26.78■■□□□ 1.88
IFT27-201ENST00000340630 PSME1Q06323 249 aa26.77■■□□□ 1.88
IFT27-201ENST00000340630 CABLES1Q8TDN4 633 aa26.77■■□□□ 1.88
IFT27-201ENST00000340630 CFAP70Q5T0N1 1121 aa26.76■■□□□ 1.87
IFT27-201ENST00000340630 KNDC1Q76NI1 1749 aa26.76■■□□□ 1.87
IFT27-201ENST00000340630 FMN2Q9NZ56 1722 aa26.76■■□□□ 1.87
IFT27-201ENST00000340630 IFT172Q9UG01 1749 aa26.76■■□□□ 1.87
IFT27-201ENST00000340630 SAFB2Q14151 953 aaKnown RBP eCLIP26.75■■□□□ 1.87
IFT27-201ENST00000340630 LMOD2Q6P5Q4 547 aa26.75■■□□□ 1.87
IFT27-201ENST00000340630 DHX57Q6P158 1386 aaKnown RBP26.74■■□□□ 1.87
IFT27-201ENST00000340630 KIF1AQ12756 1690 aa26.73■■□□□ 1.87
IFT27-201ENST00000340630 GLI3P10071 1580 aa26.73■■□□□ 1.87
IFT27-201ENST00000340630 SEPT12Q8IYM1 358 aa26.72■■□□□ 1.87
IFT27-201ENST00000340630 PRAM1Q96QH2 718 aa26.72■■□□□ 1.87
IFT27-201ENST00000340630 CCDC9Q9Y3X0 531 aaKnown RBP26.72■■□□□ 1.87
IFT27-201ENST00000340630 TNS3Q68CZ2 1445 aa26.72■■□□□ 1.87
IFT27-201ENST00000340630 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.71■■□□□ 1.87
IFT27-201ENST00000340630 VPS72Q15906 364 aa26.7■■□□□ 1.86
IFT27-201ENST00000340630 BLMP54132 1417 aaPredicted RBP26.7■■□□□ 1.86
IFT27-201ENST00000340630 USP32Q8NFA0 1604 aa26.69■■□□□ 1.86
IFT27-201ENST00000340630 DEFB132Q7Z7B7 95 aa26.69■■□□□ 1.86
IFT27-201ENST00000340630 PMFBP1Q8TBY8 1022 aa26.68■■□□□ 1.86
IFT27-201ENST00000340630 POGKQ9P215 609 aa26.68■■□□□ 1.86
IFT27-201ENST00000340630 SBNO1A3KN83 1393 aa26.68■■□□□ 1.86
IFT27-201ENST00000340630 SF3B2Q13435 895 aaKnown RBP26.67■■□□□ 1.86
IFT27-201ENST00000340630 ARHGEF10O15013 1369 aa26.65■■□□□ 1.86
IFT27-201ENST00000340630 NRXN1Q9ULB1 1477 aa26.65■■□□□ 1.86
IFT27-201ENST00000340630 FAM83GA6ND36 823 aa26.64■■□□□ 1.86
IFT27-201ENST00000340630 ONECUT3O60422 494 aaPredicted RBP26.64■■□□□ 1.86
IFT27-201ENST00000340630 RGPD8O14715 1765 aaPredicted RBP26.63■■□□□ 1.85
IFT27-201ENST00000340630 KRT27Q7Z3Y8 459 aa26.63■■□□□ 1.85
IFT27-201ENST00000340630 ACIN1Q9UKV3 1341 aaKnown RBP26.62■■□□□ 1.85
IFT27-201ENST00000340630 A0A0G2JS52 829 aa26.6■■□□□ 1.85
IFT27-201ENST00000340630 MYT1Q01538 1121 aa26.6■■□□□ 1.85
IFT27-201ENST00000340630 HIRIP3Q9BW71 556 aaPredicted RBP26.6■■□□□ 1.85
IFT27-201ENST00000340630 TRAK1Q9UPV9 953 aa26.59■■□□□ 1.85
IFT27-201ENST00000340630 BRWD3Q6RI45 1802 aa26.59■■□□□ 1.85
IFT27-201ENST00000340630 ANKARQ7Z5J8 1434 aa26.57■■□□□ 1.84
IFT27-201ENST00000340630 FAM98CQ17RN3 349 aaKnown RBP26.56■■□□□ 1.84
IFT27-201ENST00000340630 BTG4Q9NY30 223 aa26.56■■□□□ 1.84
IFT27-201ENST00000340630 MINK1Q8N4C8 1332 aaPredicted RBP26.56■■□□□ 1.84
IFT27-201ENST00000340630 PLCH1Q4KWH8 1693 aa26.55■■□□□ 1.84
IFT27-201ENST00000340630 DLC1Q96QB1 1528 aa26.55■■□□□ 1.84
IFT27-201ENST00000340630 NWD2Q9ULI1 1742 aa26.54■■□□□ 1.84
IFT27-201ENST00000340630 GPRASP1Q5JY77 1395 aa26.54■■□□□ 1.84
IFT27-201ENST00000340630 KDM2AQ9Y2K7 1162 aa26.53■■□□□ 1.84
IFT27-201ENST00000340630 PRR36Q9H6K5 1346 aa26.51■■□□□ 1.83
IFT27-201ENST00000340630 ABCA3Q99758 1704 aa26.51■■□□□ 1.83
IFT27-201ENST00000340630 BAG6P46379 1132 aa26.5■■□□□ 1.83
IFT27-201ENST00000340630 WASLO00401 505 aaPredicted RBP26.49■■□□□ 1.83
IFT27-201ENST00000340630 PAK3O75914 559 aaPredicted RBP26.49■■□□□ 1.83
IFT27-201ENST00000340630 NGDNQ8NEJ9 315 aaKnown RBP26.49■■□□□ 1.83
IFT27-201ENST00000340630 DCAF11Q8TEB1 546 aa26.48■■□□□ 1.83
IFT27-201ENST00000340630 ADGRB1O14514 1584 aa26.48■■□□□ 1.83
IFT27-201ENST00000340630 EIF3AQ14152 1382 aaKnown RBP26.47■■□□□ 1.83
IFT27-201ENST00000340630 RAB3GAP2Q9H2M9 1393 aa26.47■■□□□ 1.83
IFT27-201ENST00000340630 ADGRB2O60241 1585 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms