RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CDCA8Q53HL2 280 aa10.87□□□□□ -0.67
TMC1-202ENST00000340019 WAPLQ7Z5K2 1190 aa10.87□□□□□ -0.67
TMC1-202ENST00000340019 AMOTL2Q9Y2J4 779 aa10.87□□□□□ -0.67
TMC1-202ENST00000340019 POGKQ9P215 609 aa10.87□□□□□ -0.67
TMC1-202ENST00000340019 SAFB2Q14151 953 aaKnown RBP eCLIP10.86□□□□□ -0.67
TMC1-202ENST00000340019 NWD1Q149M9 1564 aa10.86□□□□□ -0.67
TMC1-202ENST00000340019 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
TMC1-202ENST00000340019 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.86□□□□□ -0.67
TMC1-202ENST00000340019 PUS7Q96PZ0 661 aaKnown RBP10.85□□□□□ -0.67
TMC1-202ENST00000340019 ADGRB2O60241 1585 aa10.85□□□□□ -0.67
TMC1-202ENST00000340019 EVC2Q86UK5 1308 aa10.84□□□□□ -0.67
TMC1-202ENST00000340019 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
TMC1-202ENST00000340019 KCNA6P17658 529 aa10.83□□□□□ -0.68
TMC1-202ENST00000340019 STRCP1A6NGW2 1772 aa10.81□□□□□ -0.68
TMC1-202ENST00000340019 CABP2Q9NPB3 220 aa10.81□□□□□ -0.68
TMC1-202ENST00000340019 MIER1Q8N108 512 aa10.81□□□□□ -0.68
TMC1-202ENST00000340019 CDK19Q9BWU1 502 aa10.81□□□□□ -0.68
TMC1-202ENST00000340019 WASLO00401 505 aaPredicted RBP10.8□□□□□ -0.68
TMC1-202ENST00000340019 PER1O15534 1290 aaPredicted RBP10.8□□□□□ -0.68
TMC1-202ENST00000340019 NKTRP30414 1462 aaKnown RBP10.8□□□□□ -0.68
TMC1-202ENST00000340019 NALCNQ8IZF0 1738 aa10.79□□□□□ -0.68
TMC1-202ENST00000340019 PANK3Q9H999 370 aa10.79□□□□□ -0.68
TMC1-202ENST00000340019 ATAD2Q6PL18 1390 aa10.79□□□□□ -0.68
TMC1-202ENST00000340019 SRPK2P78362 688 aaKnown RBP10.79□□□□□ -0.68
TMC1-202ENST00000340019 NINLQ9Y2I6 1382 aa10.79□□□□□ -0.68
TMC1-202ENST00000340019 SLC12A5Q9H2X9 1139 aa10.77□□□□□ -0.68
TMC1-202ENST00000340019 ATP7BP35670 1465 aa10.77□□□□□ -0.69
TMC1-202ENST00000340019 TOPAZ1Q8N9V7 1692 aa10.77□□□□□ -0.69
TMC1-202ENST00000340019 USP32Q8NFA0 1604 aa10.77□□□□□ -0.69
TMC1-202ENST00000340019 CDC42BPGQ6DT37 1551 aa10.76□□□□□ -0.69
TMC1-202ENST00000340019 ANP32CO43423 234 aa10.76□□□□□ -0.69
TMC1-202ENST00000340019 FMN2Q9NZ56 1722 aa10.76□□□□□ -0.69
TMC1-202ENST00000340019 CD163L1Q9NR16 1453 aa10.76□□□□□ -0.69
TMC1-202ENST00000340019 ADGRL3Q9HAR2 1447 aa10.76□□□□□ -0.69
TMC1-202ENST00000340019 ANKRD36BQ8N2N9 1353 aa10.75□□□□□ -0.69
TMC1-202ENST00000340019 PRR36Q9H6K5 1346 aa10.75□□□□□ -0.69
TMC1-202ENST00000340019 TMC1Q8TDI8 760 aa10.75□□□□□ -0.69
TMC1-202ENST00000340019 CARD14Q9BXL6 1004 aa10.75□□□□□ -0.69
TMC1-202ENST00000340019 PRKRIP1Q9H875 184 aaPredicted RBP10.75□□□□□ -0.69
TMC1-202ENST00000340019 NUDT16Q96DE0 195 aaKnown RBP10.74□□□□□ -0.69
TMC1-202ENST00000340019 RGPD8O14715 1765 aaPredicted RBP10.74□□□□□ -0.69
TMC1-202ENST00000340019 DMRT2Q9Y5R5 561 aa10.74□□□□□ -0.69
TMC1-202ENST00000340019 CCDC61Q9Y6R9 512 aa10.74□□□□□ -0.69
TMC1-202ENST00000340019 ITSN1Q15811 1721 aa10.74□□□□□ -0.69
TMC1-202ENST00000340019 PPIP5K1Q6PFW1 1433 aa10.74□□□□□ -0.69
TMC1-202ENST00000340019 NCOA3Q9Y6Q9 1424 aa10.74□□□□□ -0.69
TMC1-202ENST00000340019 XIRP1Q702N8 1843 aaKnown RBP10.74□□□□□ -0.69
TMC1-202ENST00000340019 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
TMC1-202ENST00000340019 A0A1W2PP64 1363 aa10.73□□□□□ -0.69
TMC1-202ENST00000340019 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
TMC1-202ENST00000340019 CABP1Q9NZU7 370 aa10.73□□□□□ -0.69
TMC1-202ENST00000340019 ANKARQ7Z5J8 1434 aa10.73□□□□□ -0.69
TMC1-202ENST00000340019 AKAP12Q02952 1782 aa10.73□□□□□ -0.69
TMC1-202ENST00000340019 NPC1L1Q9UHC9 1359 aa10.73□□□□□ -0.69
TMC1-202ENST00000340019 PROSER2Q86WR7 435 aaPredicted RBP10.73□□□□□ -0.69
TMC1-202ENST00000340019 CPSF1Q10570 1443 aaKnown RBP10.73□□□□□ -0.69
TMC1-202ENST00000340019 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
TMC1-202ENST00000340019 KTN1Q86UP2 1357 aaKnown RBP10.72□□□□□ -0.69
TMC1-202ENST00000340019 NSD3Q9BZ95 1437 aa10.72□□□□□ -0.69
TMC1-202ENST00000340019 MON2Q7Z3U7 1717 aa10.72□□□□□ -0.69
TMC1-202ENST00000340019 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
TMC1-202ENST00000340019 ZNF335Q9H4Z2 1342 aaPredicted RBP10.71□□□□□ -0.69
TMC1-202ENST00000340019 PARD3Q8TEW0 1356 aa10.71□□□□□ -0.69
TMC1-202ENST00000340019 TERF2IPQ9NYB0 399 aa10.71□□□□□ -0.69
TMC1-202ENST00000340019 LRRC7Q96NW7 1537 aa10.7□□□□□ -0.7
TMC1-202ENST00000340019 PLEKHG3A1L390 1219 aa10.7□□□□□ -0.7
TMC1-202ENST00000340019 CCER2I3L3R5 266 aa10.7□□□□□ -0.7
TMC1-202ENST00000340019 DCCP43146 1447 aa10.7□□□□□ -0.7
TMC1-202ENST00000340019 NUTM2FA1L443 756 aa10.69□□□□□ -0.7
TMC1-202ENST00000340019 RALBP1Q15311 655 aa10.69□□□□□ -0.7
TMC1-202ENST00000340019 C19orf44Q9H6X5 657 aa10.69□□□□□ -0.7
TMC1-202ENST00000340019 CC2D1BQ5T0F9 858 aaKnown RBP10.69□□□□□ -0.7
TMC1-202ENST00000340019 HDGFL2Q7Z4V5 671 aaPredicted RBP10.69□□□□□ -0.7
TMC1-202ENST00000340019 NRKQ7Z2Y5 1582 aa10.68□□□□□ -0.7
TMC1-202ENST00000340019 C14orf37Q86TY3 774 aa10.68□□□□□ -0.7
TMC1-202ENST00000340019 POLR3AO14802 1390 aaPredicted RBP10.68□□□□□ -0.7
TMC1-202ENST00000340019 KIF20BQ96Q89 1820 aa10.67□□□□□ -0.7
TMC1-202ENST00000340019 ANKRD26Q9UPS8 1709 aa10.67□□□□□ -0.7
TMC1-202ENST00000340019 CGNL1Q0VF96 1302 aa10.67□□□□□ -0.7
TMC1-202ENST00000340019 EDC4Q6P2E9 1401 aaKnown RBP10.67□□□□□ -0.7
TMC1-202ENST00000340019 ACEP12821 1306 aa10.67□□□□□ -0.7
TMC1-202ENST00000340019 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
TMC1-202ENST00000340019 NSD2O96028 1365 aa10.67□□□□□ -0.7
TMC1-202ENST00000340019 CNGB1Q14028 1251 aaPredicted RBP10.66□□□□□ -0.7
TMC1-202ENST00000340019 SSH2Q76I76 1423 aa10.66□□□□□ -0.7
TMC1-202ENST00000340019 MYBBP1AQ9BQG0 1328 aaKnown RBP10.66□□□□□ -0.7
TMC1-202ENST00000340019 USP6P35125 1406 aa10.65□□□□□ -0.7
TMC1-202ENST00000340019 MST1RQ04912 1400 aa10.65□□□□□ -0.7
TMC1-202ENST00000340019 LTBP4Q8N2S1 1624 aa10.65□□□□□ -0.7
TMC1-202ENST00000340019 MSH6P52701 1360 aa10.65□□□□□ -0.7
TMC1-202ENST00000340019 C1orf167Q5SNV9 1468 aa10.65□□□□□ -0.7
TMC1-202ENST00000340019 FYB1O15117 783 aa10.64□□□□□ -0.71
TMC1-202ENST00000340019 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
TMC1-202ENST00000340019 PMFBP1Q8TBY8 1022 aa10.64□□□□□ -0.71
TMC1-202ENST00000340019 KIF1AQ12756 1690 aa10.64□□□□□ -0.71
TMC1-202ENST00000340019 ATF3P18847 181 aa10.64□□□□□ -0.71
TMC1-202ENST00000340019 CADPS2Q86UW7 1296 aa10.63□□□□□ -0.71
TMC1-202ENST00000340019 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
TMC1-202ENST00000340019 BRD4O60885 1362 aaPredicted RBP10.62□□□□□ -0.71
TMC1-202ENST00000340019 ESCO1Q5FWF5 840 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms