RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 TMEM131LA2VDJ0 1609 aa17.31■□□□□ 0.36
CDK5RAP1-201ENST00000339269 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
CDK5RAP1-201ENST00000339269 MYO5BQ9ULV0 1848 aa17.28■□□□□ 0.36
CDK5RAP1-201ENST00000339269 FBXO31Q5XUX0 539 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP1-201ENST00000339269 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
CDK5RAP1-201ENST00000339269 SLC52A1Q9NWF4 448 aa17.27■□□□□ 0.35
CDK5RAP1-201ENST00000339269 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
CDK5RAP1-201ENST00000339269 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
CDK5RAP1-201ENST00000339269 SLC12A5Q9H2X9 1139 aa17.26■□□□□ 0.35
CDK5RAP1-201ENST00000339269 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
CDK5RAP1-201ENST00000339269 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
CDK5RAP1-201ENST00000339269 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
CDK5RAP1-201ENST00000339269 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
CDK5RAP1-201ENST00000339269 SPATA31D1Q6ZQQ2 1576 aa17.23■□□□□ 0.35
CDK5RAP1-201ENST00000339269 TNRQ92752 1358 aa17.22■□□□□ 0.35
CDK5RAP1-201ENST00000339269 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
CDK5RAP1-201ENST00000339269 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP1-201ENST00000339269 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP1-201ENST00000339269 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
CDK5RAP1-201ENST00000339269 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP1-201ENST00000339269 MSH5O43196 834 aa17.2■□□□□ 0.34
CDK5RAP1-201ENST00000339269 HSPA2P54652 639 aa17.2■□□□□ 0.34
CDK5RAP1-201ENST00000339269 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
CDK5RAP1-201ENST00000339269 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP1-201ENST00000339269 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
CDK5RAP1-201ENST00000339269 TRMT2AQ8IZ69 625 aaKnown RBP17.19■□□□□ 0.34
CDK5RAP1-201ENST00000339269 PLIN1O60240 522 aa17.18■□□□□ 0.34
CDK5RAP1-201ENST00000339269 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP1-201ENST00000339269 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
CDK5RAP1-201ENST00000339269 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
CDK5RAP1-201ENST00000339269 SLFN5Q08AF3 891 aa17.16■□□□□ 0.34
CDK5RAP1-201ENST00000339269 ALKQ9UM73 1620 aa17.16■□□□□ 0.34
CDK5RAP1-201ENST00000339269 APAF1O14727 1248 aa17.16■□□□□ 0.34
CDK5RAP1-201ENST00000339269 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
CDK5RAP1-201ENST00000339269 A2ML1A8K2U0 1454 aa17.15■□□□□ 0.34
CDK5RAP1-201ENST00000339269 YTHDC2Q9H6S0 1430 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP1-201ENST00000339269 CABP2Q9NPB3 220 aa17.15■□□□□ 0.34
CDK5RAP1-201ENST00000339269 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
CDK5RAP1-201ENST00000339269 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
CDK5RAP1-201ENST00000339269 C20orf194Q5TEA3 1177 aa17.14■□□□□ 0.33
CDK5RAP1-201ENST00000339269 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
CDK5RAP1-201ENST00000339269 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
CDK5RAP1-201ENST00000339269 MORC1Q86VD1 984 aa17.13■□□□□ 0.33
CDK5RAP1-201ENST00000339269 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP1-201ENST00000339269 UBR1Q8IWV7 1749 aa17.12■□□□□ 0.33
CDK5RAP1-201ENST00000339269 CRBNQ96SW2 442 aa17.12■□□□□ 0.33
CDK5RAP1-201ENST00000339269 STK26Q9P289 416 aa17.12■□□□□ 0.33
CDK5RAP1-201ENST00000339269 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
CDK5RAP1-201ENST00000339269 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP1-201ENST00000339269 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDK5RAP1-201ENST00000339269 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
CDK5RAP1-201ENST00000339269 STRCQ7RTU9 1775 aa17.11■□□□□ 0.33
CDK5RAP1-201ENST00000339269 ABCC11Q96J66 1382 aa17.11■□□□□ 0.33
CDK5RAP1-201ENST00000339269 NSD2O96028 1365 aa17.1■□□□□ 0.33
CDK5RAP1-201ENST00000339269 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP1-201ENST00000339269 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
CDK5RAP1-201ENST00000339269 ANP32EQ9BTT0 268 aa17.09■□□□□ 0.33
CDK5RAP1-201ENST00000339269 NINLQ9Y2I6 1382 aa17.09■□□□□ 0.33
CDK5RAP1-201ENST00000339269 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP1-201ENST00000339269 MTHFSP49914 203 aa17.07■□□□□ 0.32
CDK5RAP1-201ENST00000339269 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP1-201ENST00000339269 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
CDK5RAP1-201ENST00000339269 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
CDK5RAP1-201ENST00000339269 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
CDK5RAP1-201ENST00000339269 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
CDK5RAP1-201ENST00000339269 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP1-201ENST00000339269 COL3A1P02461 1466 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP1-201ENST00000339269 THEMISQ8N1K5 641 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP1-201ENST00000339269 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
CDK5RAP1-201ENST00000339269 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
CDK5RAP1-201ENST00000339269 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
CDK5RAP1-201ENST00000339269 E9PSI1 815 aa17.04■□□□□ 0.32
CDK5RAP1-201ENST00000339269 MED14O60244 1454 aa17.03■□□□□ 0.32
CDK5RAP1-201ENST00000339269 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP1-201ENST00000339269 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
CDK5RAP1-201ENST00000339269 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
CDK5RAP1-201ENST00000339269 RUNDC1Q96C34 613 aa17.02■□□□□ 0.32
CDK5RAP1-201ENST00000339269 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
CDK5RAP1-201ENST00000339269 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
CDK5RAP1-201ENST00000339269 FYB1O15117 783 aa17■□□□□ 0.31
CDK5RAP1-201ENST00000339269 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
CDK5RAP1-201ENST00000339269 CDK19Q9BWU1 502 aa17■□□□□ 0.31
CDK5RAP1-201ENST00000339269 POGKQ9P215 609 aa17■□□□□ 0.31
CDK5RAP1-201ENST00000339269 BCAR3O75815 825 aa16.99■□□□□ 0.31
CDK5RAP1-201ENST00000339269 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
CDK5RAP1-201ENST00000339269 GGNBP2Q9H3C7 697 aa16.99■□□□□ 0.31
CDK5RAP1-201ENST00000339269 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP1-201ENST00000339269 WAPLQ7Z5K2 1190 aa16.99■□□□□ 0.31
CDK5RAP1-201ENST00000339269 SLIT1O75093 1534 aa16.98■□□□□ 0.31
CDK5RAP1-201ENST00000339269 METP08581 1390 aa16.98■□□□□ 0.31
CDK5RAP1-201ENST00000339269 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
CDK5RAP1-201ENST00000339269 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP1-201ENST00000339269 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.31
CDK5RAP1-201ENST00000339269 TMEM2Q9UHN6 1383 aa16.96■□□□□ 0.31
CDK5RAP1-201ENST00000339269 CCDC27Q2M243 656 aa16.96■□□□□ 0.31
CDK5RAP1-201ENST00000339269 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
CDK5RAP1-201ENST00000339269 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP1-201ENST00000339269 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
CDK5RAP1-201ENST00000339269 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
CDK5RAP1-201ENST00000339269 PNPLA6Q8IY17 1366 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms