RNA–Protein interactions for RNA: ENST00000338797.10

CRTC1-202, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CRTC1, Length 6,929 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-202ENST00000338797 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
CRTC1-202ENST00000338797 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
CRTC1-202ENST00000338797 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
CRTC1-202ENST00000338797 CHMP4BP1P59074 171 aa16.88■□□□□ 0.29
CRTC1-202ENST00000338797 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 CCDC70Q6NSX1 233 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 ANKRD20A12PQ8NF67 263 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 CNNM1Q9NRU3 951 aa16.87■□□□□ 0.29
CRTC1-202ENST00000338797 E9PSI1 815 aa16.86■□□□□ 0.29
CRTC1-202ENST00000338797 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
CRTC1-202ENST00000338797 HOMER1Q86YM7 354 aa16.86■□□□□ 0.29
CRTC1-202ENST00000338797 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
CRTC1-202ENST00000338797 MYL6BP14649 208 aa16.85■□□□□ 0.29
CRTC1-202ENST00000338797 SAFBQ15424 915 aaKnown RBP eCLIP16.85■□□□□ 0.29
CRTC1-202ENST00000338797 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
CRTC1-202ENST00000338797 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
CRTC1-202ENST00000338797 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
CRTC1-202ENST00000338797 TXNDC2Q86VQ3 553 aa16.84■□□□□ 0.29
CRTC1-202ENST00000338797 IPO9Q96P70 1041 aaKnown RBP16.84■□□□□ 0.29
CRTC1-202ENST00000338797 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
CRTC1-202ENST00000338797 PDILTQ8N807 584 aa16.84■□□□□ 0.29
CRTC1-202ENST00000338797 ATP6V1DQ9Y5K8 247 aa16.83■□□□□ 0.29
CRTC1-202ENST00000338797 SMC3Q9UQE7 1217 aa16.83■□□□□ 0.28
CRTC1-202ENST00000338797 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.28
CRTC1-202ENST00000338797 SIL1Q9H173 461 aa16.83■□□□□ 0.28
CRTC1-202ENST00000338797 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.28
CRTC1-202ENST00000338797 UBTFL1P0CB47 393 aaPredicted RBP16.83■□□□□ 0.28
CRTC1-202ENST00000338797 TTC39AQ5SRH9 613 aa16.82■□□□□ 0.28
CRTC1-202ENST00000338797 DZIP1LQ8IYY4 767 aaKnown RBP16.82■□□□□ 0.28
CRTC1-202ENST00000338797 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
CRTC1-202ENST00000338797 FSD1Q9BTV5 496 aa16.81■□□□□ 0.28
CRTC1-202ENST00000338797 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
CRTC1-202ENST00000338797 GPRASP1Q5JY77 1395 aa16.81■□□□□ 0.28
CRTC1-202ENST00000338797 DDX11L8A8MPP1 907 aa16.81■□□□□ 0.28
CRTC1-202ENST00000338797 CABP4P57796 275 aa16.81■□□□□ 0.28
CRTC1-202ENST00000338797 ZSCAN29Q8IWY8 852 aaPredicted RBP16.81■□□□□ 0.28
CRTC1-202ENST00000338797 USP47Q96K76 1375 aa16.81■□□□□ 0.28
CRTC1-202ENST00000338797 CENPQQ7L2Z9 268 aaPredicted RBP16.8■□□□□ 0.28
CRTC1-202ENST00000338797 ZHX3Q9H4I2 956 aa16.8■□□□□ 0.28
CRTC1-202ENST00000338797 PIBF1Q8WXW3 757 aa16.8■□□□□ 0.28
CRTC1-202ENST00000338797 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
CRTC1-202ENST00000338797 PHLDB1Q86UU1 1377 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 CEBPZQ03701 1054 aaKnown RBP16.79■□□□□ 0.28
CRTC1-202ENST00000338797 CCDC85AQ96PX6 553 aaPredicted RBP16.79■□□□□ 0.28
CRTC1-202ENST00000338797 DDX19BQ9UMR2 479 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 ERC2O15083 957 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 OFD1O75665 1012 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 REC8O95072 547 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 BRPF1P55201 1214 aaPredicted RBP16.79■□□□□ 0.28
CRTC1-202ENST00000338797 SASS6Q6UVJ0 657 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 CDK5RAP3Q96JB5 506 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
CRTC1-202ENST00000338797 ZNF644Q9H582 1327 aaPredicted RBP16.79■□□□□ 0.28
CRTC1-202ENST00000338797 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
CRTC1-202ENST00000338797 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
CRTC1-202ENST00000338797 RRP1P56182 461 aaKnown RBP16.78■□□□□ 0.28
CRTC1-202ENST00000338797 DHX57Q6P158 1386 aaKnown RBP16.78■□□□□ 0.28
CRTC1-202ENST00000338797 PANK1Q8TE04 598 aa16.78■□□□□ 0.28
CRTC1-202ENST00000338797 API5Q9BZZ5 524 aaKnown RBP16.78■□□□□ 0.28
CRTC1-202ENST00000338797 SETQ01105 290 aaPredicted RBP16.77■□□□□ 0.28
CRTC1-202ENST00000338797 PDE3BQ13370 1112 aa16.77■□□□□ 0.27
CRTC1-202ENST00000338797 RUNDC1Q96C34 613 aa16.76■□□□□ 0.27
CRTC1-202ENST00000338797 MATR3P43243 847 aaKnown RBP eCLIP16.75■□□□□ 0.27
CRTC1-202ENST00000338797 PPM1FP49593 454 aaPredicted RBP16.75■□□□□ 0.27
CRTC1-202ENST00000338797 TATP17735 454 aaPredicted RBP16.75■□□□□ 0.27
CRTC1-202ENST00000338797 PDE4AP27815 886 aa16.75■□□□□ 0.27
CRTC1-202ENST00000338797 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
CRTC1-202ENST00000338797 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
CRTC1-202ENST00000338797 SURF6O75683 361 aaKnown RBP16.74■□□□□ 0.27
CRTC1-202ENST00000338797 STK3Q13188 491 aa16.74■□□□□ 0.27
CRTC1-202ENST00000338797 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
CRTC1-202ENST00000338797 XBP1P17861 261 aa16.74■□□□□ 0.27
CRTC1-202ENST00000338797 ROCK1Q13464 1354 aa16.74■□□□□ 0.27
CRTC1-202ENST00000338797 GNAI1P63096 354 aa16.74■□□□□ 0.27
CRTC1-202ENST00000338797 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
CRTC1-202ENST00000338797 PLEKHO1Q53GL0 409 aaPredicted RBP16.73■□□□□ 0.27
CRTC1-202ENST00000338797 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
CRTC1-202ENST00000338797 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
CRTC1-202ENST00000338797 ADAMTS2O95450 1211 aa16.72■□□□□ 0.27
CRTC1-202ENST00000338797 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
CRTC1-202ENST00000338797 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
CRTC1-202ENST00000338797 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
CRTC1-202ENST00000338797 CCDC73Q6ZRK6 1079 aa16.72■□□□□ 0.27
CRTC1-202ENST00000338797 CAGE1Q8TC20 777 aa16.71■□□□□ 0.27
CRTC1-202ENST00000338797 NUP133Q8WUM0 1156 aa16.71■□□□□ 0.27
CRTC1-202ENST00000338797 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
CRTC1-202ENST00000338797 RUFY1Q96T51 708 aa16.71■□□□□ 0.27
CRTC1-202ENST00000338797 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.27
CRTC1-202ENST00000338797 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
CRTC1-202ENST00000338797 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.27
CRTC1-202ENST00000338797 SLC26A8Q96RN1 970 aa16.7■□□□□ 0.26
CRTC1-202ENST00000338797 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
CRTC1-202ENST00000338797 CCDC30Q5VVM6 783 aa16.7■□□□□ 0.26
CRTC1-202ENST00000338797 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.261e-6■■■■■ 31.6
CRTC1-202ENST00000338797 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
CRTC1-202ENST00000338797 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms