RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 NLRP7Q8WX94 980 aa7.69□□□□□ -1.18
XRCC4-202ENST00000338635 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
XRCC4-202ENST00000338635 RPIAP49247 311 aa7.68□□□□□ -1.18
XRCC4-202ENST00000338635 GPR37O15354 613 aa7.67□□□□□ -1.18
XRCC4-202ENST00000338635 THAP11Q96EK4 314 aa7.67□□□□□ -1.18
XRCC4-202ENST00000338635 FMNL1O95466 1100 aaPredicted RBP7.67□□□□□ -1.18
XRCC4-202ENST00000338635 GCGRP47871 477 aa7.67□□□□□ -1.18
XRCC4-202ENST00000338635 KCTD17Q8N5Z5 321 aa7.67□□□□□ -1.18
XRCC4-202ENST00000338635 FAM160A2Q8N612 972 aaPredicted RBP7.67□□□□□ -1.18
XRCC4-202ENST00000338635 KIFC2Q96AC6 838 aa7.67□□□□□ -1.18
XRCC4-202ENST00000338635 PHOX2BQ99453 314 aa7.67□□□□□ -1.18
XRCC4-202ENST00000338635 SLC27A5Q9Y2P5 690 aa7.67□□□□□ -1.18
XRCC4-202ENST00000338635 TTC24A2A3L6 582 aaPredicted RBP7.66□□□□□ -1.18
XRCC4-202ENST00000338635 CD2BP2O95400 341 aaKnown RBP7.66□□□□□ -1.18
XRCC4-202ENST00000338635 SULF1Q8IWU6 871 aa7.66□□□□□ -1.18
XRCC4-202ENST00000338635 FCF1Q9Y324 198 aaKnown RBP7.66□□□□□ -1.18
XRCC4-202ENST00000338635 PLCB2Q00722 1185 aa7.65□□□□□ -1.18
XRCC4-202ENST00000338635 IRF7Q92985 503 aa7.65□□□□□ -1.18
XRCC4-202ENST00000338635 NXF1Q9UBU9 619 aaKnown RBP7.64□□□□□ -1.19
XRCC4-202ENST00000338635 BRICD5Q6PL45 260 aa7.63□□□□□ -1.19
XRCC4-202ENST00000338635 SALL2Q9Y467 1007 aaPredicted RBP7.63□□□□□ -1.19
XRCC4-202ENST00000338635 GPIHBP1Q8IV16 184 aa7.62□□□□□ -1.19
XRCC4-202ENST00000338635 PRDM9Q9NQV7 894 aa7.62□□□□□ -1.19
XRCC4-202ENST00000338635 SMPD1P17405 629 aa7.61□□□□□ -1.19
XRCC4-202ENST00000338635 GRIPAP1Q4V328 841 aa7.61□□□□□ -1.19
XRCC4-202ENST00000338635 ZBTB24O43167 697 aaPredicted RBP7.6□□□□□ -1.19
XRCC4-202ENST00000338635 KCNMA1Q12791 1236 aa7.6□□□□□ -1.19
XRCC4-202ENST00000338635 RNF19BQ6ZMZ0 732 aa7.59□□□□□ -1.19
XRCC4-202ENST00000338635 NPAS3Q8IXF0 933 aa7.59□□□□□ -1.19
XRCC4-202ENST00000338635 MSS51Q4VC12 460 aa7.59□□□□□ -1.2
XRCC4-202ENST00000338635 SNIP1Q8TAD8 396 aaKnown RBP7.58□□□□□ -1.2
XRCC4-202ENST00000338635 Q3C1V9 767 aa7.57□□□□□ -1.2
XRCC4-202ENST00000338635 GSK3AP49840 483 aa7.56□□□□□ -1.2
XRCC4-202ENST00000338635 CD46P15529 392 aa7.55□□□□□ -1.2
XRCC4-202ENST00000338635 VEGFBP49765 207 aa7.55□□□□□ -1.2
XRCC4-202ENST00000338635 HAP1P54257 671 aaPredicted RBP7.55□□□□□ -1.2
XRCC4-202ENST00000338635 H3BM21 787 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 ERBB4Q15303 1308 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 J3QL48 77 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 WNT7AO00755 349 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 KDM4AO75164 1064 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 MMP16P51512 607 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 TMEM151AQ8N4L1 468 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 KDM2AQ9Y2K7 1162 aa7.54□□□□□ -1.2
XRCC4-202ENST00000338635 MAP2K5Q13163 448 aa7.53□□□□□ -1.2
XRCC4-202ENST00000338635 HPS1Q92902 700 aa7.53□□□□□ -1.2
XRCC4-202ENST00000338635 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
XRCC4-202ENST00000338635 IRF6O14896 467 aa7.52□□□□□ -1.21
XRCC4-202ENST00000338635 TRIM32Q13049 653 aa7.52□□□□□ -1.21
XRCC4-202ENST00000338635 XP32Q5T750 250 aa7.52□□□□□ -1.21
XRCC4-202ENST00000338635 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
XRCC4-202ENST00000338635 DXOO77932 396 aaKnown RBP7.5□□□□□ -1.21
XRCC4-202ENST00000338635 CCDC24Q8N4L8 307 aa7.5□□□□□ -1.21
XRCC4-202ENST00000338635 MRGPRX2Q96LB1 330 aa7.5□□□□□ -1.21
XRCC4-202ENST00000338635 GDF11O95390 407 aa7.5□□□□□ -1.21
XRCC4-202ENST00000338635 USP46P62068 366 aa7.5□□□□□ -1.21
XRCC4-202ENST00000338635 HLA-CQ95604 372 aa7.5□□□□□ -1.21
XRCC4-202ENST00000338635 MINK1Q8N4C8 1332 aaPredicted RBP7.49□□□□□ -1.21
XRCC4-202ENST00000338635 TULP1O00294 542 aaPredicted RBP7.49□□□□□ -1.21
XRCC4-202ENST00000338635 RASSF7Q02833 373 aa7.48□□□□□ -1.21
XRCC4-202ENST00000338635 HOXA2O43364 376 aa7.47□□□□□ -1.21
XRCC4-202ENST00000338635 RC3H1Q5TC82 1133 aaKnown RBP7.46□□□□□ -1.21
XRCC4-202ENST00000338635 REPIN1Q9BWE0 567 aaKnown RBP7.46□□□□□ -1.21
XRCC4-202ENST00000338635 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.21
XRCC4-202ENST00000338635 GUCA2AQ02747 115 aa7.46□□□□□ -1.22
XRCC4-202ENST00000338635 SKOR1P84550 965 aa7.45□□□□□ -1.22
XRCC4-202ENST00000338635 SYMPKQ92797 1274 aaKnown RBP7.45□□□□□ -1.22
XRCC4-202ENST00000338635 CCDC102AQ96A19 550 aa7.45□□□□□ -1.22
XRCC4-202ENST00000338635 WNT7BP56706 349 aa7.44□□□□□ -1.22
XRCC4-202ENST00000338635 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
XRCC4-202ENST00000338635 JUNDP17535 347 aa7.43□□□□□ -1.22
XRCC4-202ENST00000338635 CLCN1P35523 988 aa7.43□□□□□ -1.22
XRCC4-202ENST00000338635 NUTM1Q86Y26 1132 aa7.43□□□□□ -1.22
XRCC4-202ENST00000338635 KRI1Q8N9T8 703 aaKnown RBP7.43□□□□□ -1.22
XRCC4-202ENST00000338635 FAM217BQ9NTX9 383 aaPredicted RBP7.43□□□□□ -1.22
XRCC4-202ENST00000338635 TRIM46Q7Z4K8 759 aa7.42□□□□□ -1.22
XRCC4-202ENST00000338635 ALDH1A1P00352 501 aa7.41□□□□□ -1.22
XRCC4-202ENST00000338635 BMP1P13497 986 aa7.41□□□□□ -1.22
XRCC4-202ENST00000338635 PTCRAQ6ISU1 281 aaPredicted RBP7.41□□□□□ -1.22
XRCC4-202ENST00000338635 RNF225M0QZC1 329 aaPredicted RBP7.4□□□□□ -1.22
XRCC4-202ENST00000338635 RETREG3Q86VR2 466 aa7.4□□□□□ -1.22
XRCC4-202ENST00000338635 VSIG10Q8N0Z9 540 aa7.4□□□□□ -1.22
XRCC4-202ENST00000338635 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
XRCC4-202ENST00000338635 IGHA1P01876 353 aa7.38□□□□□ -1.23
XRCC4-202ENST00000338635 VSIG8P0DPA2 414 aa7.38□□□□□ -1.23
XRCC4-202ENST00000338635 FDX1P10109 184 aa7.38□□□□□ -1.23
XRCC4-202ENST00000338635 GPAT2Q6NUI2 795 aa7.38□□□□□ -1.23
XRCC4-202ENST00000338635 PCDHGC3Q9UN70 934 aa7.38□□□□□ -1.23
XRCC4-202ENST00000338635 C6orf229H3BNL8 230 aa7.37□□□□□ -1.23
XRCC4-202ENST00000338635 SIAH2O43255 324 aa7.37□□□□□ -1.23
XRCC4-202ENST00000338635 EHBP1Q8NDI1 1231 aa7.37□□□□□ -1.23
XRCC4-202ENST00000338635 SSTR3P32745 418 aaPredicted RBP7.37□□□□□ -1.23
XRCC4-202ENST00000338635 MS4A1P11836 297 aa7.36□□□□□ -1.23
XRCC4-202ENST00000338635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.36□□□□□ -1.23
XRCC4-202ENST00000338635 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
XRCC4-202ENST00000338635 CAPN5O15484 640 aaPredicted RBP7.35□□□□□ -1.23
XRCC4-202ENST00000338635 SH3BP2P78314 561 aa7.35□□□□□ -1.23
XRCC4-202ENST00000338635 SPIRE2Q8WWL2 714 aa7.35□□□□□ -1.23
XRCC4-202ENST00000338635 CCNYL3P0C7X3 344 aa7.34□□□□□ -1.23
XRCC4-202ENST00000338635 NDUFV2P19404 249 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms