RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 LRPPRCP42704 1394 aaKnown RBP17.11■□□□□ 0.33
TREM2-201ENST00000338469 SOS2Q07890 1332 aaPredicted RBP17.1■□□□□ 0.33
TREM2-201ENST00000338469 LAMC1P11047 1609 aa17.1■□□□□ 0.33
TREM2-201ENST00000338469 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
TREM2-201ENST00000338469 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
TREM2-201ENST00000338469 ABCC11Q96J66 1382 aa17.09■□□□□ 0.33
TREM2-201ENST00000338469 TECPR2O15040 1411 aa17.09■□□□□ 0.33
TREM2-201ENST00000338469 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
TREM2-201ENST00000338469 UPF1Q92900 1129 aaKnown RBP eCLIP17.08■□□□□ 0.32
TREM2-201ENST00000338469 NRXN1Q9ULB1 1477 aa17.07■□□□□ 0.32
TREM2-201ENST00000338469 YTHDC2Q9H6S0 1430 aaKnown RBP17.06■□□□□ 0.32
TREM2-201ENST00000338469 AFF2P51816 1311 aa17.06■□□□□ 0.32
TREM2-201ENST00000338469 XPCQ01831 940 aaPredicted RBP17.05■□□□□ 0.32
TREM2-201ENST00000338469 ESCO1Q5FWF5 840 aa17.05■□□□□ 0.32
TREM2-201ENST00000338469 ZNF772Q68DY9 489 aaPredicted RBP17.05■□□□□ 0.32
TREM2-201ENST00000338469 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
TREM2-201ENST00000338469 C8orf37Q96NL8 207 aa17.04■□□□□ 0.32
TREM2-201ENST00000338469 FOXO3O43524 673 aa17.03■□□□□ 0.32
TREM2-201ENST00000338469 ADAMTS2O95450 1211 aa17.03■□□□□ 0.32
TREM2-201ENST00000338469 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
TREM2-201ENST00000338469 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
TREM2-201ENST00000338469 MYOM2P54296 1465 aa17.01■□□□□ 0.31
TREM2-201ENST00000338469 PXDNQ92626 1479 aa17.01■□□□□ 0.31
TREM2-201ENST00000338469 HRCP23327 699 aa17■□□□□ 0.31
TREM2-201ENST00000338469 RXRBP28702 533 aa17■□□□□ 0.31
TREM2-201ENST00000338469 SIRT1Q96EB6 747 aa17■□□□□ 0.31
TREM2-201ENST00000338469 SAFB2Q14151 953 aaKnown RBP eCLIP16.99■□□□□ 0.31
TREM2-201ENST00000338469 QTRT2Q9H974 415 aaKnown RBP16.98■□□□□ 0.31
TREM2-201ENST00000338469 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
TREM2-201ENST00000338469 FMN2Q9NZ56 1722 aa16.98■□□□□ 0.31
TREM2-201ENST00000338469 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
TREM2-201ENST00000338469 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
TREM2-201ENST00000338469 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
TREM2-201ENST00000338469 ADGRB1O14514 1584 aa16.97■□□□□ 0.31
TREM2-201ENST00000338469 RGPD8O14715 1765 aaPredicted RBP16.97■□□□□ 0.31
TREM2-201ENST00000338469 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
TREM2-201ENST00000338469 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.3
TREM2-201ENST00000338469 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
TREM2-201ENST00000338469 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
TREM2-201ENST00000338469 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
TREM2-201ENST00000338469 RGS12O14924 1447 aa16.93■□□□□ 0.3
TREM2-201ENST00000338469 RBM6P78332 1123 aaKnown RBP16.92■□□□□ 0.3
TREM2-201ENST00000338469 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
TREM2-201ENST00000338469 USP21Q9UK80 565 aa16.92■□□□□ 0.3
TREM2-201ENST00000338469 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
TREM2-201ENST00000338469 CDK12Q9NYV4 1490 aaPredicted RBP16.92■□□□□ 0.3
TREM2-201ENST00000338469 HIRIP3Q9BW71 556 aaPredicted RBP16.91■□□□□ 0.3
TREM2-201ENST00000338469 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
TREM2-201ENST00000338469 USP32Q8NFA0 1604 aa16.91■□□□□ 0.3
TREM2-201ENST00000338469 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
TREM2-201ENST00000338469 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
TREM2-201ENST00000338469 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
TREM2-201ENST00000338469 POGKQ9P215 609 aa16.89■□□□□ 0.29
TREM2-201ENST00000338469 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
TREM2-201ENST00000338469 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
TREM2-201ENST00000338469 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
TREM2-201ENST00000338469 ATRNO75882 1429 aa16.87■□□□□ 0.29
TREM2-201ENST00000338469 KIF1AQ12756 1690 aa16.86■□□□□ 0.29
TREM2-201ENST00000338469 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
TREM2-201ENST00000338469 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
TREM2-201ENST00000338469 MARF1Q9Y4F3 1742 aaKnown RBP16.85■□□□□ 0.29
TREM2-201ENST00000338469 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
TREM2-201ENST00000338469 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
TREM2-201ENST00000338469 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.28
TREM2-201ENST00000338469 TNS3Q68CZ2 1445 aa16.83■□□□□ 0.28
TREM2-201ENST00000338469 SLIT2O94813 1529 aa16.82■□□□□ 0.28
TREM2-201ENST00000338469 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
TREM2-201ENST00000338469 PSME1Q06323 249 aa16.82■□□□□ 0.28
TREM2-201ENST00000338469 SBNO1A3KN83 1393 aa16.81■□□□□ 0.28
TREM2-201ENST00000338469 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
TREM2-201ENST00000338469 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
TREM2-201ENST00000338469 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
TREM2-201ENST00000338469 TRPM3Q9HCF6 1732 aaPredicted RBP16.79■□□□□ 0.28
TREM2-201ENST00000338469 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
TREM2-201ENST00000338469 LMOD2Q6P5Q4 547 aa16.79■□□□□ 0.28
TREM2-201ENST00000338469 UNC5CLQ8IV45 518 aa16.79■□□□□ 0.28
TREM2-201ENST00000338469 GLI3P10071 1580 aa16.78■□□□□ 0.28
TREM2-201ENST00000338469 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
TREM2-201ENST00000338469 TULP4Q9NRJ4 1543 aa16.78■□□□□ 0.28
TREM2-201ENST00000338469 ABCA3Q99758 1704 aa16.77■□□□□ 0.28
TREM2-201ENST00000338469 SIN3AQ96ST3 1273 aa16.77■□□□□ 0.28
TREM2-201ENST00000338469 EP400Q96L91 3159 aa16.77■□□□□ 0.27
TREM2-201ENST00000338469 RALGAPBQ86X10 1494 aa16.76■□□□□ 0.27
TREM2-201ENST00000338469 NUDT16Q96DE0 195 aaKnown RBP16.76■□□□□ 0.27
TREM2-201ENST00000338469 CCER1Q8TC90 406 aaPredicted RBP16.75■□□□□ 0.27
TREM2-201ENST00000338469 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
TREM2-201ENST00000338469 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.75■□□□□ 0.27
TREM2-201ENST00000338469 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
TREM2-201ENST00000338469 ATP7BP35670 1465 aa16.74■□□□□ 0.27
TREM2-201ENST00000338469 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
TREM2-201ENST00000338469 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
TREM2-201ENST00000338469 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
TREM2-201ENST00000338469 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
TREM2-201ENST00000338469 KIAA1210Q9ULL0 1709 aa16.72■□□□□ 0.27
TREM2-201ENST00000338469 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
TREM2-201ENST00000338469 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
TREM2-201ENST00000338469 VPS72Q15906 364 aa16.71■□□□□ 0.27
TREM2-201ENST00000338469 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
TREM2-201ENST00000338469 BRWD3Q6RI45 1802 aa16.7■□□□□ 0.26
TREM2-201ENST00000338469 CRYBG1Q9Y4K1 1723 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms