RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 NPATQ14207 1427 aa13.23□□□□□ -0.29
HIF1A-202ENST00000337138 CD163L1Q9NR16 1453 aa13.22□□□□□ -0.29
HIF1A-202ENST00000337138 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
HIF1A-202ENST00000337138 USP19O94966 1318 aa13.22□□□□□ -0.29
HIF1A-202ENST00000337138 KNSTRNQ9Y448 316 aa13.22□□□□□ -0.29
HIF1A-202ENST00000337138 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
HIF1A-202ENST00000337138 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.3
HIF1A-202ENST00000337138 C8orf34Q49A92 452 aa13.21□□□□□ -0.3
HIF1A-202ENST00000337138 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.3
HIF1A-202ENST00000337138 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.3
HIF1A-202ENST00000337138 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.3
HIF1A-202ENST00000337138 PREX1Q8TCU6 1659 aa13.21□□□□□ -0.3
HIF1A-202ENST00000337138 ADGRL1O94910 1474 aa13.21□□□□□ -0.3
HIF1A-202ENST00000337138 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
HIF1A-202ENST00000337138 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
HIF1A-202ENST00000337138 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
HIF1A-202ENST00000337138 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
HIF1A-202ENST00000337138 KANK1Q14678 1352 aa13.2□□□□□ -0.3
HIF1A-202ENST00000337138 CHGAP10645 457 aaKnown RBP13.2□□□□□ -0.3
HIF1A-202ENST00000337138 POGZQ7Z3K3 1410 aa13.19□□□□□ -0.3
HIF1A-202ENST00000337138 ADGRF5Q8IZF2 1346 aa13.19□□□□□ -0.3
HIF1A-202ENST00000337138 CFAP65Q6ZU64 1925 aaKnown RBP13.19□□□□□ -0.3
HIF1A-202ENST00000337138 TMF1P82094 1093 aa13.19□□□□□ -0.3
HIF1A-202ENST00000337138 ASXL2Q76L83 1435 aa13.18□□□□□ -0.3
HIF1A-202ENST00000337138 AEBP2Q6ZN18 517 aaPredicted RBP13.17□□□□□ -0.3
HIF1A-202ENST00000337138 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
HIF1A-202ENST00000337138 FRAT1Q92837 279 aaPredicted RBP13.17□□□□□ -0.3
HIF1A-202ENST00000337138 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
HIF1A-202ENST00000337138 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
HIF1A-202ENST00000337138 NRXN3Q9Y4C0 1643 aa13.15□□□□□ -0.3
HIF1A-202ENST00000337138 PTPRMP28827 1452 aa13.15□□□□□ -0.3
HIF1A-202ENST00000337138 ARHGAP31Q2M1Z3 1444 aa13.14□□□□□ -0.31
HIF1A-202ENST00000337138 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
HIF1A-202ENST00000337138 GLIPR1L2Q4G1C9 344 aa13.13□□□□□ -0.31
HIF1A-202ENST00000337138 BRPF3Q9ULD4 1205 aa13.13□□□□□ -0.31
HIF1A-202ENST00000337138 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
HIF1A-202ENST00000337138 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
HIF1A-202ENST00000337138 MED14O60244 1454 aa13.12□□□□□ -0.31
HIF1A-202ENST00000337138 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
HIF1A-202ENST00000337138 APAF1O14727 1248 aa13.12□□□□□ -0.31
HIF1A-202ENST00000337138 RRP7AQ9Y3A4 280 aaKnown RBP13.12□□□□□ -0.31
HIF1A-202ENST00000337138 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
HIF1A-202ENST00000337138 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
HIF1A-202ENST00000337138 DDRGK1Q96HY6 314 aa13.11□□□□□ -0.31
HIF1A-202ENST00000337138 ZMYM3Q14202 1370 aa13.1□□□□□ -0.31
HIF1A-202ENST00000337138 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.1□□□□□ -0.31
HIF1A-202ENST00000337138 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
HIF1A-202ENST00000337138 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
HIF1A-202ENST00000337138 SLKQ9H2G2 1235 aaPredicted RBP13.1□□□□□ -0.31
HIF1A-202ENST00000337138 CD109Q6YHK3 1445 aa13.1□□□□□ -0.31
HIF1A-202ENST00000337138 REREQ9P2R6 1566 aa13.1□□□□□ -0.31
HIF1A-202ENST00000337138 BCAR3O75815 825 aa13.09□□□□□ -0.31
HIF1A-202ENST00000337138 CFAP70Q5T0N1 1121 aa13.08□□□□□ -0.32
HIF1A-202ENST00000337138 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
HIF1A-202ENST00000337138 AKAP12Q02952 1782 aa13.08□□□□□ -0.32
HIF1A-202ENST00000337138 NFKBIBQ15653 356 aa13.08□□□□□ -0.32
HIF1A-202ENST00000337138 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
HIF1A-202ENST00000337138 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
HIF1A-202ENST00000337138 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
HIF1A-202ENST00000337138 IGHDP01880 384 aa13.07□□□□□ -0.32
HIF1A-202ENST00000337138 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
HIF1A-202ENST00000337138 NRKQ7Z2Y5 1582 aa13.06□□□□□ -0.32
HIF1A-202ENST00000337138 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
HIF1A-202ENST00000337138 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
HIF1A-202ENST00000337138 CENPQQ7L2Z9 268 aaPredicted RBP13.05□□□□□ -0.32
HIF1A-202ENST00000337138 FRAT2O75474 233 aaPredicted RBP13.05□□□□□ -0.32
HIF1A-202ENST00000337138 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
HIF1A-202ENST00000337138 PANK1Q8TE04 598 aa13.04□□□□□ -0.32
HIF1A-202ENST00000337138 RGPD1P0DJD0 1748 aa13.04□□□□□ -0.32
HIF1A-202ENST00000337138 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
HIF1A-202ENST00000337138 NEO1Q92859 1461 aa13.04□□□□□ -0.32
HIF1A-202ENST00000337138 PNPLA6Q8IY17 1366 aa13.04□□□□□ -0.32
HIF1A-202ENST00000337138 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
HIF1A-202ENST00000337138 C3P01024 1663 aa13.03□□□□□ -0.32
HIF1A-202ENST00000337138 SAFB2Q14151 953 aaKnown RBP eCLIP13.03□□□□□ -0.32
HIF1A-202ENST00000337138 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
HIF1A-202ENST00000337138 NSD3Q9BZ95 1437 aa13.03□□□□□ -0.32
HIF1A-202ENST00000337138 NALCNQ8IZF0 1738 aa13.03□□□□□ -0.32
HIF1A-202ENST00000337138 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
HIF1A-202ENST00000337138 GSE1Q14687 1217 aa13.03□□□□□ -0.32
HIF1A-202ENST00000337138 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
HIF1A-202ENST00000337138 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.32
HIF1A-202ENST00000337138 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.32
HIF1A-202ENST00000337138 OSCARQ8IYS5 282 aa13.02□□□□□ -0.32
HIF1A-202ENST00000337138 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.32
HIF1A-202ENST00000337138 USP35Q9P2H5 1018 aa13.02□□□□□ -0.33
HIF1A-202ENST00000337138 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
HIF1A-202ENST00000337138 ALKQ9UM73 1620 aa13.01□□□□□ -0.33
HIF1A-202ENST00000337138 MARF1Q9Y4F3 1742 aaKnown RBP13□□□□□ -0.33
HIF1A-202ENST00000337138 DLC1Q96QB1 1528 aa13□□□□□ -0.33
HIF1A-202ENST00000337138 NGEFQ8N5V2 710 aa13□□□□□ -0.33
HIF1A-202ENST00000337138 N4BP2Q86UW6 1770 aaPredicted RBP13□□□□□ -0.33
HIF1A-202ENST00000337138 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
HIF1A-202ENST00000337138 SEC24BO95487 1268 aa12.99□□□□□ -0.33
HIF1A-202ENST00000337138 ANTXR1Q9H6X2 564 aa12.99□□□□□ -0.33
HIF1A-202ENST00000337138 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
HIF1A-202ENST00000337138 YEATS2Q9ULM3 1422 aa12.98□□□□□ -0.33
HIF1A-202ENST00000337138 RLBP1P12271 317 aa12.98□□□□□ -0.33
HIF1A-202ENST00000337138 PDE3AQ14432 1141 aa12.98□□□□□ -0.33
HIF1A-202ENST00000337138 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms