RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 FRAT1Q92837 279 aaPredicted RBP11.62□□□□□ -0.55
SNCA-201ENST00000336904 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
SNCA-201ENST00000336904 NEO1Q92859 1461 aa11.62□□□□□ -0.55
SNCA-201ENST00000336904 RICTORQ6R327 1708 aa11.62□□□□□ -0.55
SNCA-201ENST00000336904 TNNQ9UQP3 1299 aa11.62□□□□□ -0.55
SNCA-201ENST00000336904 GLI2P10070 1586 aa11.61□□□□□ -0.55
SNCA-201ENST00000336904 U2AF1L5P0DN76 240 aaPredicted RBP11.61□□□□□ -0.55
SNCA-201ENST00000336904 U2AF1Q01081 240 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNCA-201ENST00000336904 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
SNCA-201ENST00000336904 EVC2Q86UK5 1308 aa11.61□□□□□ -0.55
SNCA-201ENST00000336904 KIAA1210Q9ULL0 1709 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 NBR1Q14596 966 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 NEXMIFQ5QGS0 1516 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 TULP4Q9NRJ4 1543 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
SNCA-201ENST00000336904 PIK3C2BO00750 1634 aa11.59□□□□□ -0.55
SNCA-201ENST00000336904 RGS3P49796 1198 aa11.59□□□□□ -0.55
SNCA-201ENST00000336904 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
SNCA-201ENST00000336904 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
SNCA-201ENST00000336904 PANK1Q8TE04 598 aa11.59□□□□□ -0.55
SNCA-201ENST00000336904 CABP1Q9NZU7 370 aa11.59□□□□□ -0.55
SNCA-201ENST00000336904 CANXP27824 592 aaKnown RBP11.58□□□□□ -0.56
SNCA-201ENST00000336904 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
SNCA-201ENST00000336904 CLUAP1Q96AJ1 413 aa11.58□□□□□ -0.56
SNCA-201ENST00000336904 A0A1W2PP64 1363 aa11.58□□□□□ -0.56
SNCA-201ENST00000336904 RPGRIP1LQ68CZ1 1315 aa11.57□□□□□ -0.56
SNCA-201ENST00000336904 CDK19Q9BWU1 502 aa11.57□□□□□ -0.56
SNCA-201ENST00000336904 TXNDC2Q86VQ3 553 aa11.57□□□□□ -0.56
SNCA-201ENST00000336904 TSR2Q969E8 191 aaKnown RBP11.57□□□□□ -0.56
SNCA-201ENST00000336904 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
SNCA-201ENST00000336904 ZRANB1Q9UGI0 708 aa11.57□□□□□ -0.56
SNCA-201ENST00000336904 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
SNCA-201ENST00000336904 CEBPAP49715 358 aaPredicted RBP11.56□□□□□ -0.56
SNCA-201ENST00000336904 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
SNCA-201ENST00000336904 ESF1Q9H501 851 aaKnown RBP11.55□□□□□ -0.56
SNCA-201ENST00000336904 SOX12O15370 315 aa11.54□□□□□ -0.56
SNCA-201ENST00000336904 PDE4AP27815 886 aa11.54□□□□□ -0.56
SNCA-201ENST00000336904 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
SNCA-201ENST00000336904 NPC1L1Q9UHC9 1359 aa11.54□□□□□ -0.56
SNCA-201ENST00000336904 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
SNCA-201ENST00000336904 ZC3H13Q5T200 1668 aaKnown RBP11.54□□□□□ -0.56
SNCA-201ENST00000336904 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
SNCA-201ENST00000336904 MYO3AQ8NEV4 1616 aa11.54□□□□□ -0.56
SNCA-201ENST00000336904 DIP2BQ9P265 1576 aa11.53□□□□□ -0.56
SNCA-201ENST00000336904 YTHDC2Q9H6S0 1430 aaKnown RBP11.53□□□□□ -0.56
SNCA-201ENST00000336904 FYB1O15117 783 aa11.53□□□□□ -0.56
SNCA-201ENST00000336904 ANP32AP39687 249 aaKnown RBP11.53□□□□□ -0.56
SNCA-201ENST00000336904 RUNDC1Q96C34 613 aa11.53□□□□□ -0.56
SNCA-201ENST00000336904 ANKRD36BQ8N2N9 1353 aa11.53□□□□□ -0.56
SNCA-201ENST00000336904 CLTCQ00610 1675 aaKnown RBP11.52□□□□□ -0.56
SNCA-201ENST00000336904 E9PSI1 815 aa11.52□□□□□ -0.56
SNCA-201ENST00000336904 CFAP53Q96M91 514 aa11.52□□□□□ -0.56
SNCA-201ENST00000336904 NEURL4Q96JN8 1562 aa11.52□□□□□ -0.56
SNCA-201ENST00000336904 HMOX1P09601 288 aa11.52□□□□□ -0.57
SNCA-201ENST00000336904 TMEM131LA2VDJ0 1609 aa11.52□□□□□ -0.57
SNCA-201ENST00000336904 SLC4A3P48751 1232 aa11.52□□□□□ -0.57
SNCA-201ENST00000336904 NOP58Q9Y2X3 529 aaKnown RBP11.52□□□□□ -0.57
SNCA-201ENST00000336904 POLR3AO14802 1390 aaPredicted RBP11.51□□□□□ -0.57
SNCA-201ENST00000336904 NKTRP30414 1462 aaKnown RBP11.51□□□□□ -0.57
SNCA-201ENST00000336904 LAS1LQ9Y4W2 734 aaKnown RBP11.51□□□□□ -0.57
SNCA-201ENST00000336904 IGHDP01880 384 aa11.51□□□□□ -0.57
SNCA-201ENST00000336904 RLBP1P12271 317 aa11.51□□□□□ -0.57
SNCA-201ENST00000336904 PTPRMP28827 1452 aa11.51□□□□□ -0.57
SNCA-201ENST00000336904 SHPRHQ149N8 1683 aa11.51□□□□□ -0.57
SNCA-201ENST00000336904 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
SNCA-201ENST00000336904 TRMT2AQ8IZ69 625 aaKnown RBP11.5□□□□□ -0.57
SNCA-201ENST00000336904 THUMPD2Q9BTF0 503 aaKnown RBP11.5□□□□□ -0.57
SNCA-201ENST00000336904 BCL11AQ9H165 835 aa11.5□□□□□ -0.57
SNCA-201ENST00000336904 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
SNCA-201ENST00000336904 NME9Q86XW9 330 aa11.49□□□□□ -0.57
SNCA-201ENST00000336904 ARHGAP31Q2M1Z3 1444 aa11.49□□□□□ -0.57
SNCA-201ENST00000336904 METP08581 1390 aa11.49□□□□□ -0.57
SNCA-201ENST00000336904 EMILIN1Q9Y6C2 1016 aa11.49□□□□□ -0.57
SNCA-201ENST00000336904 RRS1Q15050 365 aaKnown RBP11.49□□□□□ -0.57
SNCA-201ENST00000336904 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.49□□□□□ -0.57
SNCA-201ENST00000336904 SLC26A8Q96RN1 970 aa11.49□□□□□ -0.57
SNCA-201ENST00000336904 TERF2IPQ9NYB0 399 aa11.49□□□□□ -0.57
SNCA-201ENST00000336904 ALKQ9UM73 1620 aa11.48□□□□□ -0.57
SNCA-201ENST00000336904 RIMS2Q9UQ26 1411 aa11.48□□□□□ -0.57
SNCA-201ENST00000336904 HDGFL2Q7Z4V5 671 aaPredicted RBP11.48□□□□□ -0.57
SNCA-201ENST00000336904 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
SNCA-201ENST00000336904 INSRP06213 1382 aa11.47□□□□□ -0.57
SNCA-201ENST00000336904 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
SNCA-201ENST00000336904 IPO9Q96P70 1041 aaKnown RBP11.47□□□□□ -0.57
SNCA-201ENST00000336904 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
SNCA-201ENST00000336904 ELL2O00472 640 aaPredicted RBP11.46□□□□□ -0.57
SNCA-201ENST00000336904 RARSP54136 660 aaKnown RBP11.46□□□□□ -0.57
SNCA-201ENST00000336904 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
SNCA-201ENST00000336904 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.57
SNCA-201ENST00000336904 EXOSC9Q06265 439 aaKnown RBP11.46□□□□□ -0.57
SNCA-201ENST00000336904 A2ML1A8K2U0 1454 aa11.46□□□□□ -0.58
SNCA-201ENST00000336904 MAPK8IP3Q9UPT6 1336 aa11.46□□□□□ -0.58
SNCA-201ENST00000336904 ZMYM3Q14202 1370 aa11.46□□□□□ -0.58
SNCA-201ENST00000336904 RIPK4P57078 832 aa11.45□□□□□ -0.58
SNCA-201ENST00000336904 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
SNCA-201ENST00000336904 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms