RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 GLI3P10071 1580 aa18.11■□□□□ 0.49
LCE4A-201ENST00000335535 RALGAPBQ86X10 1494 aa18.09■□□□□ 0.49
LCE4A-201ENST00000335535 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
LCE4A-201ENST00000335535 HRCP23327 699 aa18.08■□□□□ 0.48
LCE4A-201ENST00000335535 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
LCE4A-201ENST00000335535 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
LCE4A-201ENST00000335535 SLIT2O94813 1529 aa18.07■□□□□ 0.48
LCE4A-201ENST00000335535 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
LCE4A-201ENST00000335535 BRWD3Q6RI45 1802 aa18.06■□□□□ 0.48
LCE4A-201ENST00000335535 SF3B2Q13435 895 aaKnown RBP18.05■□□□□ 0.48
LCE4A-201ENST00000335535 PXDNQ92626 1479 aa18.05■□□□□ 0.48
LCE4A-201ENST00000335535 UNC5CLQ8IV45 518 aa18.03■□□□□ 0.48
LCE4A-201ENST00000335535 ROCK1Q13464 1354 aa18.02■□□□□ 0.47
LCE4A-201ENST00000335535 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
LCE4A-201ENST00000335535 PSDA5PKW4 1024 aaPredicted RBP18■□□□□ 0.47
LCE4A-201ENST00000335535 ONECUT3O60422 494 aaPredicted RBP17.99■□□□□ 0.47
LCE4A-201ENST00000335535 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
LCE4A-201ENST00000335535 SEPT12Q8IYM1 358 aa17.98■□□□□ 0.47
LCE4A-201ENST00000335535 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
LCE4A-201ENST00000335535 CDC42BPGQ6DT37 1551 aa17.96■□□□□ 0.47
LCE4A-201ENST00000335535 BAG6P46379 1132 aa17.96■□□□□ 0.47
LCE4A-201ENST00000335535 HFM1A2PYH4 1435 aa17.96■□□□□ 0.47
LCE4A-201ENST00000335535 USP32Q8NFA0 1604 aa17.95■□□□□ 0.46
LCE4A-201ENST00000335535 YY1P25490 414 aa17.94■□□□□ 0.46
LCE4A-201ENST00000335535 ITGAEP38570 1179 aa17.94■□□□□ 0.46
LCE4A-201ENST00000335535 VPS72Q15906 364 aa17.94■□□□□ 0.46
LCE4A-201ENST00000335535 KRT27Q7Z3Y8 459 aa17.94■□□□□ 0.46
LCE4A-201ENST00000335535 NAIPQ13075 1403 aa17.94■□□□□ 0.46
LCE4A-201ENST00000335535 DISP2A7MBM2 1401 aa17.93■□□□□ 0.46
LCE4A-201ENST00000335535 NWD2Q9ULI1 1742 aa17.92■□□□□ 0.46
LCE4A-201ENST00000335535 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
LCE4A-201ENST00000335535 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
LCE4A-201ENST00000335535 ESCO1Q5FWF5 840 aa17.9■□□□□ 0.46
LCE4A-201ENST00000335535 RGPD1P0DJD0 1748 aa17.89■□□□□ 0.46
LCE4A-201ENST00000335535 PLCH1Q4KWH8 1693 aa17.88■□□□□ 0.45
LCE4A-201ENST00000335535 FOXO3O43524 673 aa17.88■□□□□ 0.45
LCE4A-201ENST00000335535 SPATA31A3Q5VYP0 1347 aa17.88■□□□□ 0.45
LCE4A-201ENST00000335535 NUP155O75694 1391 aa17.88■□□□□ 0.45
LCE4A-201ENST00000335535 R3HDM1Q15032 1099 aaKnown RBP17.87■□□□□ 0.45
LCE4A-201ENST00000335535 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
LCE4A-201ENST00000335535 CLTCL1P53675 1640 aa17.86■□□□□ 0.45
LCE4A-201ENST00000335535 TNS1Q9HBL0 1735 aaKnown RBP17.84■□□□□ 0.45
LCE4A-201ENST00000335535 CCDC144AA2RUR9 1427 aa17.84■□□□□ 0.45
LCE4A-201ENST00000335535 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
LCE4A-201ENST00000335535 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
LCE4A-201ENST00000335535 KIF1AQ12756 1690 aa17.83■□□□□ 0.45
LCE4A-201ENST00000335535 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
LCE4A-201ENST00000335535 ABCA3Q99758 1704 aa17.81■□□□□ 0.44
LCE4A-201ENST00000335535 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
LCE4A-201ENST00000335535 NRAPQ86VF7 1730 aa17.8■□□□□ 0.44
LCE4A-201ENST00000335535 TNS3Q68CZ2 1445 aa17.79■□□□□ 0.44
LCE4A-201ENST00000335535 KIF1BO60333 1816 aa17.79■□□□□ 0.44
LCE4A-201ENST00000335535 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
LCE4A-201ENST00000335535 CCDC9Q9Y3X0 531 aaKnown RBP17.78■□□□□ 0.44
LCE4A-201ENST00000335535 TECPR2O15040 1411 aa17.78■□□□□ 0.44
LCE4A-201ENST00000335535 PARD3Q8TEW0 1356 aa17.78■□□□□ 0.44
LCE4A-201ENST00000335535 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.44
LCE4A-201ENST00000335535 IFFO2Q5TF58 517 aa17.76■□□□□ 0.43
LCE4A-201ENST00000335535 CAMKK2Q96RR4 588 aa17.76■□□□□ 0.43
LCE4A-201ENST00000335535 THSD7AQ9UPZ6 1657 aa17.76■□□□□ 0.43
LCE4A-201ENST00000335535 EZH2Q15910 746 aaKnown RBP17.75■□□□□ 0.43
LCE4A-201ENST00000335535 FAM98CQ17RN3 349 aaKnown RBP17.75■□□□□ 0.43
LCE4A-201ENST00000335535 NINLQ9Y2I6 1382 aa17.75■□□□□ 0.43
LCE4A-201ENST00000335535 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
LCE4A-201ENST00000335535 KRT28Q7Z3Y7 464 aa17.74■□□□□ 0.43
LCE4A-201ENST00000335535 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
LCE4A-201ENST00000335535 RREB1Q92766 1687 aa17.74■□□□□ 0.43
LCE4A-201ENST00000335535 FAM83GA6ND36 823 aa17.73■□□□□ 0.43
LCE4A-201ENST00000335535 ARHGEF10O15013 1369 aa17.72■□□□□ 0.43
LCE4A-201ENST00000335535 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
LCE4A-201ENST00000335535 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
LCE4A-201ENST00000335535 PPLO60437 1756 aa17.71■□□□□ 0.43
LCE4A-201ENST00000335535 A0A0G2JS52 829 aa17.71■□□□□ 0.43
LCE4A-201ENST00000335535 MYT1Q01538 1121 aa17.71■□□□□ 0.43
LCE4A-201ENST00000335535 NUP188Q5SRE5 1749 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 KNDC1Q76NI1 1749 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
LCE4A-201ENST00000335535 COL14A1Q05707 1796 aaKnown RBP17.69■□□□□ 0.42
LCE4A-201ENST00000335535 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 PSME1Q06323 249 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 FAM182BQ5T319 152 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 SPATA31A5Q5VU36 1347 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 SPATA31A7Q8IWB4 1347 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
LCE4A-201ENST00000335535 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
LCE4A-201ENST00000335535 ABCC11Q96J66 1382 aa17.67■□□□□ 0.42
LCE4A-201ENST00000335535 UTRNP46939 3433 aa17.66■□□□□ 0.42
LCE4A-201ENST00000335535 WAPLQ7Z5K2 1190 aa17.66■□□□□ 0.42
LCE4A-201ENST00000335535 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
LCE4A-201ENST00000335535 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
LCE4A-201ENST00000335535 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
LCE4A-201ENST00000335535 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
LCE4A-201ENST00000335535 ZNF784Q8NCA9 323 aaPredicted RBP17.65■□□□□ 0.42
LCE4A-201ENST00000335535 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
LCE4A-201ENST00000335535 IFT172Q9UG01 1749 aa17.64■□□□□ 0.41
LCE4A-201ENST00000335535 KCNQ2O43526 872 aa17.63■□□□□ 0.41
LCE4A-201ENST00000335535 TRIM37O94972 964 aa17.63■□□□□ 0.41
LCE4A-201ENST00000335535 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
LCE4A-201ENST00000335535 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
LCE4A-201ENST00000335535 CLSPNQ9HAW4 1339 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms