RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 POLR3GLQ9BT43 218 aa16.79■□□□□ 0.28
TRIM49B-201ENST00000332682 POGKQ9P215 609 aa16.79■□□□□ 0.28
TRIM49B-201ENST00000332682 MYOM1P52179 1685 aa16.78■□□□□ 0.28
TRIM49B-201ENST00000332682 CDCA8Q53HL2 280 aa16.77■□□□□ 0.28
TRIM49B-201ENST00000332682 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.28
TRIM49B-201ENST00000332682 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
TRIM49B-201ENST00000332682 NWD1Q149M9 1564 aa16.76■□□□□ 0.27
TRIM49B-201ENST00000332682 MINK1Q8N4C8 1332 aaPredicted RBP16.75■□□□□ 0.27
TRIM49B-201ENST00000332682 ADGRB2O60241 1585 aa16.74■□□□□ 0.27
TRIM49B-201ENST00000332682 EVC2Q86UK5 1308 aa16.74■□□□□ 0.27
TRIM49B-201ENST00000332682 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
TRIM49B-201ENST00000332682 KCNA6P17658 529 aa16.74■□□□□ 0.27
TRIM49B-201ENST00000332682 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
TRIM49B-201ENST00000332682 NKTRP30414 1462 aaKnown RBP16.68■□□□□ 0.26
TRIM49B-201ENST00000332682 STRCP1A6NGW2 1772 aa16.68■□□□□ 0.26
TRIM49B-201ENST00000332682 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
TRIM49B-201ENST00000332682 CABP2Q9NPB3 220 aa16.67■□□□□ 0.26
TRIM49B-201ENST00000332682 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
TRIM49B-201ENST00000332682 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
TRIM49B-201ENST00000332682 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
TRIM49B-201ENST00000332682 WASLO00401 505 aaPredicted RBP16.65■□□□□ 0.26
TRIM49B-201ENST00000332682 MIER1Q8N108 512 aa16.65■□□□□ 0.26
TRIM49B-201ENST00000332682 PANK3Q9H999 370 aa16.65■□□□□ 0.26
TRIM49B-201ENST00000332682 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.26
TRIM49B-201ENST00000332682 ATP7BP35670 1465 aa16.64■□□□□ 0.25
TRIM49B-201ENST00000332682 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
TRIM49B-201ENST00000332682 TOPAZ1Q8N9V7 1692 aa16.62■□□□□ 0.25
TRIM49B-201ENST00000332682 ADGRL3Q9HAR2 1447 aa16.62■□□□□ 0.25
TRIM49B-201ENST00000332682 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
TRIM49B-201ENST00000332682 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
TRIM49B-201ENST00000332682 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
TRIM49B-201ENST00000332682 FMN2Q9NZ56 1722 aa16.61■□□□□ 0.25
TRIM49B-201ENST00000332682 USP32Q8NFA0 1604 aa16.61■□□□□ 0.25
TRIM49B-201ENST00000332682 ANP32CO43423 234 aa16.6■□□□□ 0.25
TRIM49B-201ENST00000332682 ANKRD36BQ8N2N9 1353 aa16.6■□□□□ 0.25
TRIM49B-201ENST00000332682 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
TRIM49B-201ENST00000332682 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
TRIM49B-201ENST00000332682 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
TRIM49B-201ENST00000332682 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
TRIM49B-201ENST00000332682 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
TRIM49B-201ENST00000332682 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
TRIM49B-201ENST00000332682 PROSER2Q86WR7 435 aaPredicted RBP16.57■□□□□ 0.24
TRIM49B-201ENST00000332682 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
TRIM49B-201ENST00000332682 CARD14Q9BXL6 1004 aa16.57■□□□□ 0.24
TRIM49B-201ENST00000332682 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
TRIM49B-201ENST00000332682 PRKRIP1Q9H875 184 aaPredicted RBP16.56■□□□□ 0.24
TRIM49B-201ENST00000332682 CABP1Q9NZU7 370 aa16.56■□□□□ 0.24
TRIM49B-201ENST00000332682 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
TRIM49B-201ENST00000332682 TMEM94Q12767 1356 aa16.56■□□□□ 0.24
TRIM49B-201ENST00000332682 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
TRIM49B-201ENST00000332682 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
TRIM49B-201ENST00000332682 ZNF335Q9H4Z2 1342 aaPredicted RBP16.56■□□□□ 0.24
TRIM49B-201ENST00000332682 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
TRIM49B-201ENST00000332682 NCOA3Q9Y6Q9 1424 aa16.55■□□□□ 0.24
TRIM49B-201ENST00000332682 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
TRIM49B-201ENST00000332682 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
TRIM49B-201ENST00000332682 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
TRIM49B-201ENST00000332682 AMER1Q5JTC6 1135 aaPredicted RBP16.54■□□□□ 0.24
TRIM49B-201ENST00000332682 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 MON2Q7Z3U7 1717 aa16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 NUTM2FA1L443 756 aa16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 C14orf37Q86TY3 774 aa16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 NPC1L1Q9UHC9 1359 aa16.53■□□□□ 0.24
TRIM49B-201ENST00000332682 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.24
TRIM49B-201ENST00000332682 DCCP43146 1447 aa16.52■□□□□ 0.23
TRIM49B-201ENST00000332682 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
TRIM49B-201ENST00000332682 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
TRIM49B-201ENST00000332682 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
TRIM49B-201ENST00000332682 C19orf44Q9H6X5 657 aa16.5■□□□□ 0.23
TRIM49B-201ENST00000332682 CC2D1BQ5T0F9 858 aaKnown RBP16.49■□□□□ 0.23
TRIM49B-201ENST00000332682 NRKQ7Z2Y5 1582 aa16.49■□□□□ 0.23
TRIM49B-201ENST00000332682 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
TRIM49B-201ENST00000332682 RALBP1Q15311 655 aa16.48■□□□□ 0.23
TRIM49B-201ENST00000332682 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
TRIM49B-201ENST00000332682 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
TRIM49B-201ENST00000332682 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
TRIM49B-201ENST00000332682 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
TRIM49B-201ENST00000332682 ANKRD26Q9UPS8 1709 aa16.46■□□□□ 0.23
TRIM49B-201ENST00000332682 ACEP12821 1306 aa16.46■□□□□ 0.23
TRIM49B-201ENST00000332682 NSD2O96028 1365 aa16.46■□□□□ 0.23
TRIM49B-201ENST00000332682 MSH6P52701 1360 aa16.46■□□□□ 0.23
TRIM49B-201ENST00000332682 USP6P35125 1406 aa16.45■□□□□ 0.22
TRIM49B-201ENST00000332682 MST1RQ04912 1400 aa16.45■□□□□ 0.22
TRIM49B-201ENST00000332682 C1orf167Q5SNV9 1468 aa16.45■□□□□ 0.22
TRIM49B-201ENST00000332682 LTBP4Q8N2S1 1624 aa16.45■□□□□ 0.22
TRIM49B-201ENST00000332682 PMFBP1Q8TBY8 1022 aa16.44■□□□□ 0.22
TRIM49B-201ENST00000332682 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
TRIM49B-201ENST00000332682 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
TRIM49B-201ENST00000332682 ATF3P18847 181 aa16.43■□□□□ 0.22
TRIM49B-201ENST00000332682 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
TRIM49B-201ENST00000332682 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
TRIM49B-201ENST00000332682 PHF8Q9UPP1 1060 aa16.42■□□□□ 0.22
TRIM49B-201ENST00000332682 SSH2Q76I76 1423 aa16.42■□□□□ 0.22
TRIM49B-201ENST00000332682 FYB1O15117 783 aa16.4■□□□□ 0.22
TRIM49B-201ENST00000332682 CCDC184Q52MB2 194 aa16.4■□□□□ 0.22
TRIM49B-201ENST00000332682 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
TRIM49B-201ENST00000332682 NGDNQ8NEJ9 315 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms