RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
PRKD1-201ENST00000331968 C14orf93Q9H972 538 aaKnown RBP17.1■□□□□ 0.33
PRKD1-201ENST00000331968 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
PRKD1-201ENST00000331968 E9PSI1 815 aa17.1■□□□□ 0.33
PRKD1-201ENST00000331968 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
PRKD1-201ENST00000331968 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
PRKD1-201ENST00000331968 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
PRKD1-201ENST00000331968 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.33
PRKD1-201ENST00000331968 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
PRKD1-201ENST00000331968 NLRP6P59044 892 aa17.08■□□□□ 0.32
PRKD1-201ENST00000331968 USP35Q9P2H5 1018 aa17.08■□□□□ 0.32
PRKD1-201ENST00000331968 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
PRKD1-201ENST00000331968 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
PRKD1-201ENST00000331968 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
PRKD1-201ENST00000331968 DUOX2Q9NRD8 1548 aa17.07■□□□□ 0.32
PRKD1-201ENST00000331968 CENPQQ7L2Z9 268 aaPredicted RBP17.07■□□□□ 0.32
PRKD1-201ENST00000331968 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
PRKD1-201ENST00000331968 ADGRL2O95490 1459 aa17.07■□□□□ 0.32
PRKD1-201ENST00000331968 MS4A1P11836 297 aa17.06■□□□□ 0.32
PRKD1-201ENST00000331968 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
PRKD1-201ENST00000331968 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
PRKD1-201ENST00000331968 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
PRKD1-201ENST00000331968 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
PRKD1-201ENST00000331968 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
PRKD1-201ENST00000331968 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
PRKD1-201ENST00000331968 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
PRKD1-201ENST00000331968 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
PRKD1-201ENST00000331968 SULT6B1Q6IMI4 303 aa17.03■□□□□ 0.32
PRKD1-201ENST00000331968 GCC2Q8IWJ2 1684 aa17.03■□□□□ 0.32
PRKD1-201ENST00000331968 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
PRKD1-201ENST00000331968 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.32
PRKD1-201ENST00000331968 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.31
PRKD1-201ENST00000331968 EIF2S2P20042 333 aaKnown RBP17■□□□□ 0.31
PRKD1-201ENST00000331968 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
PRKD1-201ENST00000331968 FAM83GA6ND36 823 aa17■□□□□ 0.31
PRKD1-201ENST00000331968 PSME1Q06323 249 aa17■□□□□ 0.31
PRKD1-201ENST00000331968 NGEFQ8N5V2 710 aa17■□□□□ 0.31
PRKD1-201ENST00000331968 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
PRKD1-201ENST00000331968 ABTB2Q8N961 1025 aa17■□□□□ 0.31
PRKD1-201ENST00000331968 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
PRKD1-201ENST00000331968 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
PRKD1-201ENST00000331968 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
PRKD1-201ENST00000331968 RTEL1-TNFRSF6BF6WH68 1400 aa16.99■□□□□ 0.31
PRKD1-201ENST00000331968 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
PRKD1-201ENST00000331968 FYB1O15117 783 aa16.98■□□□□ 0.31
PRKD1-201ENST00000331968 ZNF518AQ6AHZ1 1483 aa16.98■□□□□ 0.31
PRKD1-201ENST00000331968 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
PRKD1-201ENST00000331968 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
PRKD1-201ENST00000331968 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
PRKD1-201ENST00000331968 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
PRKD1-201ENST00000331968 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
PRKD1-201ENST00000331968 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRKD1-201ENST00000331968 AMOTL2Q9Y2J4 779 aa16.96■□□□□ 0.31
PRKD1-201ENST00000331968 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
PRKD1-201ENST00000331968 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
PRKD1-201ENST00000331968 ATP7AQ04656 1500 aa16.96■□□□□ 0.3
PRKD1-201ENST00000331968 MCM10Q7L590 875 aa16.95■□□□□ 0.3
PRKD1-201ENST00000331968 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
PRKD1-201ENST00000331968 RPGRIP1LQ68CZ1 1315 aa16.95■□□□□ 0.3
PRKD1-201ENST00000331968 TMPOP42166 694 aaKnown RBP16.94■□□□□ 0.3
PRKD1-201ENST00000331968 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
PRKD1-201ENST00000331968 NOB1Q9ULX3 412 aaKnown RBP16.94■□□□□ 0.3
PRKD1-201ENST00000331968 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
PRKD1-201ENST00000331968 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
PRKD1-201ENST00000331968 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
PRKD1-201ENST00000331968 RWDD1Q9H446 243 aaPredicted RBP16.94■□□□□ 0.3
PRKD1-201ENST00000331968 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
PRKD1-201ENST00000331968 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
PRKD1-201ENST00000331968 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
PRKD1-201ENST00000331968 NPATQ14207 1427 aa16.93■□□□□ 0.3
PRKD1-201ENST00000331968 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
PRKD1-201ENST00000331968 FOXO3O43524 673 aa16.93■□□□□ 0.3
PRKD1-201ENST00000331968 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
PRKD1-201ENST00000331968 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
PRKD1-201ENST00000331968 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
PRKD1-201ENST00000331968 ATP10AO60312 1499 aa16.91■□□□□ 0.3
PRKD1-201ENST00000331968 AEBP1Q8IUX7 1158 aa16.91■□□□□ 0.3
PRKD1-201ENST00000331968 UHRF1BP1Q6BDS2 1440 aa16.91■□□□□ 0.3
PRKD1-201ENST00000331968 HSP90AB2PQ58FF8 381 aa16.9■□□□□ 0.3
PRKD1-201ENST00000331968 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
PRKD1-201ENST00000331968 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
PRKD1-201ENST00000331968 MYO5CQ9NQX4 1742 aa16.89■□□□□ 0.3
PRKD1-201ENST00000331968 OS9Q13438 667 aaPredicted RBP16.89■□□□□ 0.29
PRKD1-201ENST00000331968 KRT24Q2M2I5 525 aa16.89■□□□□ 0.29
PRKD1-201ENST00000331968 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
PRKD1-201ENST00000331968 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
PRKD1-201ENST00000331968 THEMISQ8N1K5 641 aaPredicted RBP16.88■□□□□ 0.29
PRKD1-201ENST00000331968 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
PRKD1-201ENST00000331968 IGHDP01880 384 aa16.88■□□□□ 0.29
PRKD1-201ENST00000331968 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
PRKD1-201ENST00000331968 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
PRKD1-201ENST00000331968 FOXD4L6Q3SYB3 417 aaPredicted RBP16.88■□□□□ 0.29
PRKD1-201ENST00000331968 FOXD4L3Q6VB84 417 aaPredicted RBP16.88■□□□□ 0.29
PRKD1-201ENST00000331968 BCORL1Q5H9F3 1711 aa16.87■□□□□ 0.29
PRKD1-201ENST00000331968 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
PRKD1-201ENST00000331968 MAGI2Q86UL8 1455 aa16.87■□□□□ 0.29
PRKD1-201ENST00000331968 SEC24BO95487 1268 aa16.87■□□□□ 0.29
PRKD1-201ENST00000331968 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
PRKD1-201ENST00000331968 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
PRKD1-201ENST00000331968 ADGBQ8N7X0 1667 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms