RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 SIRT1Q96EB6 747 aa26.69■■□□□ 1.86
RAB28-202ENST00000330852 STK26Q9P289 416 aa26.69■■□□□ 1.86
RAB28-202ENST00000330852 ORAI2Q96SN7 254 aa26.68■■□□□ 1.86
RAB28-202ENST00000330852 SOS2Q07890 1332 aaPredicted RBP26.68■■□□□ 1.86
RAB28-202ENST00000330852 YTHDC2Q9H6S0 1430 aaKnown RBP26.68■■□□□ 1.86
RAB28-202ENST00000330852 PNPLA6Q8IY17 1366 aa26.67■■□□□ 1.86
RAB28-202ENST00000330852 NUTM2BA6NNL0 878 aaPredicted RBP26.67■■□□□ 1.86
RAB28-202ENST00000330852 NUTM2EB1AL46 878 aaPredicted RBP26.67■■□□□ 1.86
RAB28-202ENST00000330852 TMEM132EQ6IEE7 984 aa26.67■■□□□ 1.86
RAB28-202ENST00000330852 NUTM2AQ8IVF1 878 aaPredicted RBP26.67■■□□□ 1.86
RAB28-202ENST00000330852 DDX17Q92841 729 aaKnown RBP26.67■■□□□ 1.86
RAB28-202ENST00000330852 WAPLQ7Z5K2 1190 aa26.64■■□□□ 1.85
RAB28-202ENST00000330852 DHX57Q6P158 1386 aaKnown RBP26.63■■□□□ 1.85
RAB28-202ENST00000330852 STAC3Q96MF2 364 aa26.62■■□□□ 1.85
RAB28-202ENST00000330852 NPHP3Q7Z494 1330 aa26.61■■□□□ 1.85
RAB28-202ENST00000330852 ESCO1Q5FWF5 840 aa26.61■■□□□ 1.85
RAB28-202ENST00000330852 CFAP70Q5T0N1 1121 aa26.59■■□□□ 1.85
RAB28-202ENST00000330852 FMN2Q9NZ56 1722 aa26.58■■□□□ 1.85
RAB28-202ENST00000330852 PLEKHH1Q9ULM0 1364 aa26.58■■□□□ 1.85
RAB28-202ENST00000330852 AFF2P51816 1311 aa26.56■■□□□ 1.84
RAB28-202ENST00000330852 COL22A1Q8NFW1 1626 aaPredicted RBP26.56■■□□□ 1.84
RAB28-202ENST00000330852 RXRBP28702 533 aa26.54■■□□□ 1.84
RAB28-202ENST00000330852 DLC1Q96QB1 1528 aa26.54■■□□□ 1.84
RAB28-202ENST00000330852 KIF1AQ12756 1690 aa26.53■■□□□ 1.84
RAB28-202ENST00000330852 PXDNQ92626 1479 aa26.53■■□□□ 1.84
RAB28-202ENST00000330852 CDK12Q9NYV4 1490 aaPredicted RBP26.53■■□□□ 1.84
RAB28-202ENST00000330852 C8orf37Q96NL8 207 aa26.53■■□□□ 1.84
RAB28-202ENST00000330852 FOXO3O43524 673 aa26.51■■□□□ 1.83
RAB28-202ENST00000330852 NUTM2FA1L443 756 aa26.49■■□□□ 1.83
RAB28-202ENST00000330852 DCAF11Q8TEB1 546 aa26.49■■□□□ 1.83
RAB28-202ENST00000330852 NGLY1Q96IV0 654 aa26.49■■□□□ 1.83
RAB28-202ENST00000330852 ADGRB1O14514 1584 aa26.49■■□□□ 1.83
RAB28-202ENST00000330852 PRAM1Q96QH2 718 aa26.48■■□□□ 1.83
RAB28-202ENST00000330852 ADAMTS2O95450 1211 aa26.48■■□□□ 1.83
RAB28-202ENST00000330852 RGPD8O14715 1765 aaPredicted RBP26.47■■□□□ 1.83
RAB28-202ENST00000330852 POGKQ9P215 609 aa26.47■■□□□ 1.83
RAB28-202ENST00000330852 QTRT2Q9H974 415 aaKnown RBP26.45■■□□□ 1.83
RAB28-202ENST00000330852 KDM2AQ9Y2K7 1162 aa26.45■■□□□ 1.83
RAB28-202ENST00000330852 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.82
RAB28-202ENST00000330852 MARF1Q9Y4F3 1742 aaKnown RBP26.44■■□□□ 1.82
RAB28-202ENST00000330852 ADGRB2O60241 1585 aa26.43■■□□□ 1.82
RAB28-202ENST00000330852 FNBP4Q8N3X1 1017 aaPredicted RBP26.42■■□□□ 1.82
RAB28-202ENST00000330852 PHF8Q9UPP1 1060 aa26.42■■□□□ 1.82
RAB28-202ENST00000330852 ANKARQ7Z5J8 1434 aa26.41■■□□□ 1.82
RAB28-202ENST00000330852 XPCQ01831 940 aaPredicted RBP26.41■■□□□ 1.82
RAB28-202ENST00000330852 SAFB2Q14151 953 aaKnown RBP eCLIP26.4■■□□□ 1.822e-6■■■□□ 16.4
RAB28-202ENST00000330852 SPATA31A3Q5VYP0 1347 aa26.4■■□□□ 1.82
RAB28-202ENST00000330852 PSME1Q06323 249 aa26.39■■□□□ 1.82
RAB28-202ENST00000330852 KRT28Q7Z3Y7 464 aa26.39■■□□□ 1.82
RAB28-202ENST00000330852 USP21Q9UK80 565 aa26.39■■□□□ 1.82
RAB28-202ENST00000330852 TRAK1Q9UPV9 953 aa26.39■■□□□ 1.82
RAB28-202ENST00000330852 EIF3AQ14152 1382 aaKnown RBP26.39■■□□□ 1.81
RAB28-202ENST00000330852 TRPC5Q9UL62 973 aaPredicted RBP26.37■■□□□ 1.81
RAB28-202ENST00000330852 KIAA1210Q9ULL0 1709 aa26.34■■□□□ 1.81
RAB28-202ENST00000330852 UPF1Q92900 1129 aaKnown RBP eCLIP26.34■■□□□ 1.81
RAB28-202ENST00000330852 USP32Q8NFA0 1604 aa26.34■■□□□ 1.81
RAB28-202ENST00000330852 SBNO1A3KN83 1393 aa26.34■■□□□ 1.81
RAB28-202ENST00000330852 TNS3Q68CZ2 1445 aa26.33■■□□□ 1.81
RAB28-202ENST00000330852 RGS12O14924 1447 aa26.31■■□□□ 1.8
RAB28-202ENST00000330852 ATRNO75882 1429 aa26.31■■□□□ 1.8
RAB28-202ENST00000330852 ARHGEF28Q8N1W1 1705 aaKnown RBP26.31■■□□□ 1.8
RAB28-202ENST00000330852 WASLO00401 505 aaPredicted RBP26.3■■□□□ 1.8
RAB28-202ENST00000330852 MINK1Q8N4C8 1332 aaPredicted RBP26.29■■□□□ 1.8
RAB28-202ENST00000330852 TULP4Q9NRJ4 1543 aa26.29■■□□□ 1.8
RAB28-202ENST00000330852 ARHGEF10O15013 1369 aa26.29■■□□□ 1.8
RAB28-202ENST00000330852 BCL9LQ86UU0 1499 aa26.28■■□□□ 1.8
RAB28-202ENST00000330852 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.28■■□□□ 1.8
RAB28-202ENST00000330852 HIRIP3Q9BW71 556 aaPredicted RBP26.28■■□□□ 1.8
RAB28-202ENST00000330852 PMFBP1Q8TBY8 1022 aa26.25■■□□□ 1.79
RAB28-202ENST00000330852 GPRASP1Q5JY77 1395 aa26.24■■□□□ 1.79
RAB28-202ENST00000330852 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
RAB28-202ENST00000330852 SLIT2O94813 1529 aa26.23■■□□□ 1.79
RAB28-202ENST00000330852 HAP1P54257 671 aaPredicted RBP26.23■■□□□ 1.79
RAB28-202ENST00000330852 PRR36Q9H6K5 1346 aa26.23■■□□□ 1.79
RAB28-202ENST00000330852 TRPM3Q9HCF6 1732 aaPredicted RBP26.22■■□□□ 1.79
RAB28-202ENST00000330852 UNC5CLQ8IV45 518 aa26.22■■□□□ 1.79
RAB28-202ENST00000330852 ABCA3Q99758 1704 aa26.21■■□□□ 1.79
RAB28-202ENST00000330852 LMOD2Q6P5Q4 547 aa26.2■■□□□ 1.79
RAB28-202ENST00000330852 GJD4Q96KN9 370 aaPredicted RBP26.2■■□□□ 1.79
RAB28-202ENST00000330852 NWD2Q9ULI1 1742 aa26.19■■□□□ 1.78
RAB28-202ENST00000330852 ATAD2Q6PL18 1390 aa26.19■■□□□ 1.78
RAB28-202ENST00000330852 ALS2Q96Q42 1657 aa26.18■■□□□ 1.78
RAB28-202ENST00000330852 NGDNQ8NEJ9 315 aaKnown RBP26.17■■□□□ 1.78
RAB28-202ENST00000330852 CABLES1Q8TDN4 633 aa26.17■■□□□ 1.78
RAB28-202ENST00000330852 NUDT16Q96DE0 195 aaKnown RBP26.16■■□□□ 1.78
RAB28-202ENST00000330852 ATP7BP35670 1465 aa26.16■■□□□ 1.78
RAB28-202ENST00000330852 PLCH1Q4KWH8 1693 aa26.14■■□□□ 1.78
RAB28-202ENST00000330852 NBPF1Q3BBV0 1214 aa26.14■■□□□ 1.77
RAB28-202ENST00000330852 CDK19Q9BWU1 502 aa26.14■■□□□ 1.77
RAB28-202ENST00000330852 CCDC61Q9Y6R9 512 aa26.11■■□□□ 1.77
RAB28-202ENST00000330852 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
RAB28-202ENST00000330852 VPS72Q15906 364 aa26.11■■□□□ 1.77
RAB28-202ENST00000330852 GLI3P10071 1580 aa26.1■■□□□ 1.77
RAB28-202ENST00000330852 L3MBTL2Q969R5 705 aa26.1■■□□□ 1.77
RAB28-202ENST00000330852 TOPAZ1Q8N9V7 1692 aa26.09■■□□□ 1.77
RAB28-202ENST00000330852 FAM83GA6ND36 823 aa26.08■■□□□ 1.76
RAB28-202ENST00000330852 CENPJQ9HC77 1338 aaPredicted RBP26.07■■□□□ 1.76
RAB28-202ENST00000330852 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
RAB28-202ENST00000330852 PLEKHG3A1L390 1219 aa26.07■■□□□ 1.76
RAB28-202ENST00000330852 PAK3O75914 559 aaPredicted RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms