RNA–Protein interactions for RNA: ENST00000330398.8

ATP6V0C-201, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0C, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-201ENST00000330398 TRAK1Q9UPV9 953 aa26.21■■□□□ 1.79
ATP6V0C-201ENST00000330398 ROBO1Q9Y6N7 1651 aa26.21■■□□□ 1.79
ATP6V0C-201ENST00000330398 PRAM1Q96QH2 718 aa26.2■■□□□ 1.78
ATP6V0C-201ENST00000330398 CDC42BPGQ6DT37 1551 aa26.18■■□□□ 1.78
ATP6V0C-201ENST00000330398 POGKQ9P215 609 aa26.17■■□□□ 1.78
ATP6V0C-201ENST00000330398 BRINP3Q76B58 766 aa26.15■■□□□ 1.78
ATP6V0C-201ENST00000330398 TIMELESSQ9UNS1 1208 aa26.15■■□□□ 1.78
ATP6V0C-201ENST00000330398 C1orf167Q5SNV9 1468 aa26.15■■□□□ 1.78
ATP6V0C-201ENST00000330398 NBPF8Q3BBV2 869 aa26.14■■□□□ 1.78
ATP6V0C-201ENST00000330398 TRPM1Q7Z4N2 1603 aa26.13■■□□□ 1.77
ATP6V0C-201ENST00000330398 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
ATP6V0C-201ENST00000330398 ARHGEF28Q8N1W1 1705 aaKnown RBP26.1■■□□□ 1.77
ATP6V0C-201ENST00000330398 SAFB2Q14151 953 aaKnown RBP eCLIP26.09■■□□□ 1.77
ATP6V0C-201ENST00000330398 GPRASP1Q5JY77 1395 aa26.08■■□□□ 1.77
ATP6V0C-201ENST00000330398 AHDC1Q5TGY3 1603 aaPredicted RBP26.08■■□□□ 1.77
ATP6V0C-201ENST00000330398 ADGRB2O60241 1585 aa26.07■■□□□ 1.76
ATP6V0C-201ENST00000330398 ROCK2O75116 1388 aaKnown RBP26.06■■□□□ 1.76
ATP6V0C-201ENST00000330398 FMN2Q9NZ56 1722 aa26.05■■□□□ 1.76
ATP6V0C-201ENST00000330398 ORAI2Q96SN7 254 aa26.05■■□□□ 1.76
ATP6V0C-201ENST00000330398 PHLPP1O60346 1717 aa26.03■■□□□ 1.76
ATP6V0C-201ENST00000330398 MINK1Q8N4C8 1332 aaPredicted RBP26.03■■□□□ 1.76
ATP6V0C-201ENST00000330398 WASLO00401 505 aaPredicted RBP26.02■■□□□ 1.76
ATP6V0C-201ENST00000330398 RALGAPBQ86X10 1494 aa26.02■■□□□ 1.76
ATP6V0C-201ENST00000330398 ESCO1Q5FWF5 840 aa26.01■■□□□ 1.75
ATP6V0C-201ENST00000330398 NHSL1Q5SYE7 1610 aa26.01■■□□□ 1.75
ATP6V0C-201ENST00000330398 COL16A1Q07092 1604 aaPredicted RBP26■■□□□ 1.75
ATP6V0C-201ENST00000330398 ANKARQ7Z5J8 1434 aa26■■□□□ 1.75
ATP6V0C-201ENST00000330398 CENPJQ9HC77 1338 aaPredicted RBP26■■□□□ 1.75
ATP6V0C-201ENST00000330398 HIRIP3Q9BW71 556 aaPredicted RBP26■■□□□ 1.75
ATP6V0C-201ENST00000330398 EIF3AQ14152 1382 aaKnown RBP25.99■■□□□ 1.75
ATP6V0C-201ENST00000330398 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
ATP6V0C-201ENST00000330398 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
ATP6V0C-201ENST00000330398 CARD11Q9BXL7 1154 aa25.96■■□□□ 1.75
ATP6V0C-201ENST00000330398 JCADQ9P266 1359 aa25.95■■□□□ 1.75
ATP6V0C-201ENST00000330398 NPHP3Q7Z494 1330 aa25.94■■□□□ 1.74
ATP6V0C-201ENST00000330398 DDX17Q92841 729 aaKnown RBP25.94■■□□□ 1.74
ATP6V0C-201ENST00000330398 LRRC59Q96AG4 307 aaKnown RBP25.94■■□□□ 1.74
ATP6V0C-201ENST00000330398 TULP4Q9NRJ4 1543 aa25.93■■□□□ 1.74
ATP6V0C-201ENST00000330398 USP32Q8NFA0 1604 aa25.92■■□□□ 1.74
ATP6V0C-201ENST00000330398 CDK19Q9BWU1 502 aa25.92■■□□□ 1.74
ATP6V0C-201ENST00000330398 PHF8Q9UPP1 1060 aa25.92■■□□□ 1.74
ATP6V0C-201ENST00000330398 RGPD8O14715 1765 aaPredicted RBP25.92■■□□□ 1.74
ATP6V0C-201ENST00000330398 PRR36Q9H6K5 1346 aa25.91■■□□□ 1.74
ATP6V0C-201ENST00000330398 KIF1AQ12756 1690 aa25.91■■□□□ 1.74
ATP6V0C-201ENST00000330398 FOXO3O43524 673 aa25.91■■□□□ 1.74
ATP6V0C-201ENST00000330398 QRICH2Q9H0J4 1663 aa25.89■■□□□ 1.73
ATP6V0C-201ENST00000330398 NUDT16Q96DE0 195 aaKnown RBP25.88■■□□□ 1.73
ATP6V0C-201ENST00000330398 PXDNQ92626 1479 aa25.87■■□□□ 1.73
ATP6V0C-201ENST00000330398 SBNO2Q9Y2G9 1366 aa25.87■■□□□ 1.73
ATP6V0C-201ENST00000330398 SPATA31A6Q5VVP1 1343 aa25.87■■□□□ 1.73
ATP6V0C-201ENST00000330398 SHPRHQ149N8 1683 aa25.86■■□□□ 1.73
ATP6V0C-201ENST00000330398 ATP7BP35670 1465 aa25.85■■□□□ 1.73
ATP6V0C-201ENST00000330398 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
ATP6V0C-201ENST00000330398 EVC2Q86UK5 1308 aa25.84■■□□□ 1.73
ATP6V0C-201ENST00000330398 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
ATP6V0C-201ENST00000330398 PNPLA6Q8IY17 1366 aa25.82■■□□□ 1.72
ATP6V0C-201ENST00000330398 KRT28Q7Z3Y7 464 aa25.82■■□□□ 1.72
ATP6V0C-201ENST00000330398 PLEKHG3A1L390 1219 aa25.81■■□□□ 1.72
ATP6V0C-201ENST00000330398 PSME1Q06323 249 aa25.81■■□□□ 1.72
ATP6V0C-201ENST00000330398 PMFBP1Q8TBY8 1022 aa25.81■■□□□ 1.72
ATP6V0C-201ENST00000330398 SRPK2P78362 688 aaKnown RBP25.8■■□□□ 1.72
ATP6V0C-201ENST00000330398 ITSN1Q15811 1721 aa25.8■■□□□ 1.72
ATP6V0C-201ENST00000330398 CABP2Q9NPB3 220 aa25.79■■□□□ 1.72
ATP6V0C-201ENST00000330398 SLC24A1O60721 1099 aa25.78■■□□□ 1.72
ATP6V0C-201ENST00000330398 XPCQ01831 940 aaPredicted RBP25.78■■□□□ 1.72
ATP6V0C-201ENST00000330398 SPATA31A3Q5VYP0 1347 aa25.78■■□□□ 1.72
ATP6V0C-201ENST00000330398 SBNO1A3KN83 1393 aa25.78■■□□□ 1.72
ATP6V0C-201ENST00000330398 TOPAZ1Q8N9V7 1692 aa25.77■■□□□ 1.72
ATP6V0C-201ENST00000330398 POLR3AO14802 1390 aaPredicted RBP25.76■■□□□ 1.71
ATP6V0C-201ENST00000330398 DISP3Q9P2K9 1392 aa25.76■■□□□ 1.71
ATP6V0C-201ENST00000330398 ST20-MTHFSA0A0A6YYL1 179 aa25.75■■□□□ 1.71
ATP6V0C-201ENST00000330398 NGDNQ8NEJ9 315 aaKnown RBP25.75■■□□□ 1.71
ATP6V0C-201ENST00000330398 TESK2Q96S53 571 aa25.75■■□□□ 1.71
ATP6V0C-201ENST00000330398 PUS7Q96PZ0 661 aaKnown RBP25.74■■□□□ 1.71
ATP6V0C-201ENST00000330398 COL22A1Q8NFW1 1626 aaPredicted RBP25.74■■□□□ 1.71
ATP6V0C-201ENST00000330398 USP47Q96K76 1375 aa25.72■■□□□ 1.71
ATP6V0C-201ENST00000330398 LRP6O75581 1613 aa25.72■■□□□ 1.71
ATP6V0C-201ENST00000330398 PPIP5K1Q6PFW1 1433 aa25.71■■□□□ 1.71
ATP6V0C-201ENST00000330398 ACEP12821 1306 aa25.71■■□□□ 1.71
ATP6V0C-201ENST00000330398 TNS3Q68CZ2 1445 aa25.71■■□□□ 1.71
ATP6V0C-201ENST00000330398 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
ATP6V0C-201ENST00000330398 CABP1Q9NZU7 370 aa25.69■■□□□ 1.7
ATP6V0C-201ENST00000330398 TRPM3Q9HCF6 1732 aaPredicted RBP25.68■■□□□ 1.7
ATP6V0C-201ENST00000330398 ARHGEF10O15013 1369 aa25.68■■□□□ 1.7
ATP6V0C-201ENST00000330398 NUTM2BA6NNL0 878 aaPredicted RBP25.67■■□□□ 1.7
ATP6V0C-201ENST00000330398 NUTM2EB1AL46 878 aaPredicted RBP25.67■■□□□ 1.7
ATP6V0C-201ENST00000330398 NUTM2AQ8IVF1 878 aaPredicted RBP25.67■■□□□ 1.7
ATP6V0C-201ENST00000330398 PHF23Q9BUL5 403 aaPredicted RBP25.66■■□□□ 1.7
ATP6V0C-201ENST00000330398 BRD4O60885 1362 aaPredicted RBP25.66■■□□□ 1.7
ATP6V0C-201ENST00000330398 RGS17Q9UGC6 210 aaPredicted RBP25.65■■□□□ 1.7
ATP6V0C-201ENST00000330398 ZNF692Q9BU19 519 aaPredicted RBP25.63■■□□□ 1.69
ATP6V0C-201ENST00000330398 ALS2Q96Q42 1657 aa25.63■■□□□ 1.69
ATP6V0C-201ENST00000330398 MEX3CQ5U5Q3 659 aaKnown RBP25.62■■□□□ 1.69
ATP6V0C-201ENST00000330398 TMF1P82094 1093 aa25.6■■□□□ 1.69
ATP6V0C-201ENST00000330398 CPSF1Q10570 1443 aaKnown RBP25.59■■□□□ 1.69
ATP6V0C-201ENST00000330398 USP6P35125 1406 aa25.58■■□□□ 1.69
ATP6V0C-201ENST00000330398 PAK3O75914 559 aaPredicted RBP25.58■■□□□ 1.69
ATP6V0C-201ENST00000330398 EIF4G2P78344 907 aaKnown RBP eCLIP25.58■■□□□ 1.699e-7■■□□□ 11.8
ATP6V0C-201ENST00000330398 LMOD2Q6P5Q4 547 aa25.58■■□□□ 1.69
ATP6V0C-201ENST00000330398 SSH2Q76I76 1423 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms