RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 TNNQ9UQP3 1299 aa19.13■□□□□ 0.65
RGPD6-202ENST00000330331 NASPP49321 788 aaPredicted RBP19.12■□□□□ 0.65
RGPD6-202ENST00000330331 PMFBP1Q8TBY8 1022 aa19.12■□□□□ 0.65
RGPD6-202ENST00000330331 TRAPPC8Q9Y2L5 1435 aa19.11■□□□□ 0.65
RGPD6-202ENST00000330331 PPP1R9BQ96SB3 815 aa19.1■□□□□ 0.65
RGPD6-202ENST00000330331 MAP7D2Q96T17 732 aa19.1■□□□□ 0.65
RGPD6-202ENST00000330331 COL17A1Q9UMD9 1497 aaPredicted RBP19.1■□□□□ 0.65
RGPD6-202ENST00000330331 E9PSI1 815 aa19.1■□□□□ 0.65
RGPD6-202ENST00000330331 FOXD4L1Q9NU39 408 aa19.1■□□□□ 0.65
RGPD6-202ENST00000330331 UQCRHLA0A096LP55 91 aa19.09■□□□□ 0.65
RGPD6-202ENST00000330331 UQCRHP07919 91 aa19.09■□□□□ 0.65
RGPD6-202ENST00000330331 KNSTRNQ9Y448 316 aa19.09■□□□□ 0.65
RGPD6-202ENST00000330331 ANP32BQ92688 251 aaKnown RBP19.09■□□□□ 0.65
RGPD6-202ENST00000330331 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.65
RGPD6-202ENST00000330331 SMAP1Q8IYB5 467 aaPredicted RBP19.08■□□□□ 0.65
RGPD6-202ENST00000330331 CD109Q6YHK3 1445 aa19.08■□□□□ 0.65
RGPD6-202ENST00000330331 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
RGPD6-202ENST00000330331 PLXNC1O60486 1568 aa19.08■□□□□ 0.64
RGPD6-202ENST00000330331 TMF1P82094 1093 aa19.07■□□□□ 0.64
RGPD6-202ENST00000330331 GBP4Q96PP9 640 aa19.07■□□□□ 0.64
RGPD6-202ENST00000330331 RLBP1P12271 317 aa19.07■□□□□ 0.64
RGPD6-202ENST00000330331 ADGRL1O94910 1474 aa19.07■□□□□ 0.64
RGPD6-202ENST00000330331 ERBINQ96RT1 1412 aa19.06■□□□□ 0.64
RGPD6-202ENST00000330331 TERF1P54274 439 aa19.06■□□□□ 0.64
RGPD6-202ENST00000330331 DDIT3P35638 169 aa19.06■□□□□ 0.64
RGPD6-202ENST00000330331 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
RGPD6-202ENST00000330331 SKOR2Q2VWA4 1001 aaPredicted RBP19.05■□□□□ 0.64
RGPD6-202ENST00000330331 BCL2L13Q9BXK5 485 aa19.05■□□□□ 0.64
RGPD6-202ENST00000330331 RWDD1Q9H446 243 aaPredicted RBP19.04■□□□□ 0.64
RGPD6-202ENST00000330331 PRAG1Q86YV5 1406 aa19.04■□□□□ 0.64
RGPD6-202ENST00000330331 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
RGPD6-202ENST00000330331 HSP90AB1P08238 724 aaKnown RBP19.03■□□□□ 0.64
RGPD6-202ENST00000330331 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.64
RGPD6-202ENST00000330331 SPAG9O60271 1321 aaKnown RBP19.02■□□□□ 0.63
RGPD6-202ENST00000330331 RAB3GAP1Q15042 981 aa19.01■□□□□ 0.63
RGPD6-202ENST00000330331 ZFYVE16Q7Z3T8 1539 aa19.01■□□□□ 0.63
RGPD6-202ENST00000330331 AMER1Q5JTC6 1135 aaPredicted RBP19.01■□□□□ 0.63
RGPD6-202ENST00000330331 MAGI2Q86UL8 1455 aa19■□□□□ 0.63
RGPD6-202ENST00000330331 NEUROD2Q15784 382 aa19■□□□□ 0.63
RGPD6-202ENST00000330331 DUOX2Q9NRD8 1548 aa19■□□□□ 0.63
RGPD6-202ENST00000330331 TRPM1Q7Z4N2 1603 aa18.99■□□□□ 0.63
RGPD6-202ENST00000330331 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
RGPD6-202ENST00000330331 NCOA3Q9Y6Q9 1424 aa18.99■□□□□ 0.63
RGPD6-202ENST00000330331 NINLQ9Y2I6 1382 aa18.99■□□□□ 0.63
RGPD6-202ENST00000330331 DDX49Q9Y6V7 483 aaKnown RBP18.99■□□□□ 0.63
RGPD6-202ENST00000330331 SMC5Q8IY18 1101 aa18.98■□□□□ 0.63
RGPD6-202ENST00000330331 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.98■□□□□ 0.63
RGPD6-202ENST00000330331 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
RGPD6-202ENST00000330331 ZMYM3Q14202 1370 aa18.98■□□□□ 0.63
RGPD6-202ENST00000330331 INO80Q9ULG1 1556 aaPredicted RBP18.98■□□□□ 0.63
RGPD6-202ENST00000330331 SSFA2P28290 1259 aa18.97■□□□□ 0.63
RGPD6-202ENST00000330331 RARSP54136 660 aaKnown RBP18.97■□□□□ 0.63
RGPD6-202ENST00000330331 GLI2P10070 1586 aa18.97■□□□□ 0.63
RGPD6-202ENST00000330331 ATP7AQ04656 1500 aa18.97■□□□□ 0.63
RGPD6-202ENST00000330331 NCLP19338 710 aaKnown RBP18.96■□□□□ 0.63
RGPD6-202ENST00000330331 NOL7Q9UMY1 257 aaKnown RBP18.96■□□□□ 0.63
RGPD6-202ENST00000330331 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
RGPD6-202ENST00000330331 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
RGPD6-202ENST00000330331 DYNC1I1O14576 645 aa18.96■□□□□ 0.63
RGPD6-202ENST00000330331 ZNF500O60304 480 aaPredicted RBP18.95■□□□□ 0.62
RGPD6-202ENST00000330331 DIP2BQ9P265 1576 aa18.95■□□□□ 0.62
RGPD6-202ENST00000330331 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
RGPD6-202ENST00000330331 UNC13BO14795 1591 aa18.94■□□□□ 0.62
RGPD6-202ENST00000330331 PDE4CQ08493 712 aa18.94■□□□□ 0.62
RGPD6-202ENST00000330331 DMTNQ08495 405 aa18.94■□□□□ 0.62
RGPD6-202ENST00000330331 MTERF4Q7Z6M4 381 aaKnown RBP18.94■□□□□ 0.62
RGPD6-202ENST00000330331 RRP7AQ9Y3A4 280 aaKnown RBP18.94■□□□□ 0.62
RGPD6-202ENST00000330331 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
RGPD6-202ENST00000330331 PTMSP20962 102 aa18.94■□□□□ 0.62
RGPD6-202ENST00000330331 SNX21Q969T3 373 aa18.94■□□□□ 0.62
RGPD6-202ENST00000330331 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
RGPD6-202ENST00000330331 CD2BP2O95400 341 aaKnown RBP18.93■□□□□ 0.62
RGPD6-202ENST00000330331 NEO1Q92859 1461 aa18.93■□□□□ 0.62
RGPD6-202ENST00000330331 GOLGA6L22H0YM25 854 aa18.92■□□□□ 0.62
RGPD6-202ENST00000330331 FAM69CQ0P6D2 419 aa18.92■□□□□ 0.62
RGPD6-202ENST00000330331 JARID2Q92833 1246 aaPredicted RBP18.92■□□□□ 0.62
RGPD6-202ENST00000330331 RBSNQ9H1K0 784 aa18.92■□□□□ 0.62
RGPD6-202ENST00000330331 KIDINS220Q9ULH0 1771 aa18.92■□□□□ 0.62
RGPD6-202ENST00000330331 FAM135AQ9P2D6 1515 aa18.91■□□□□ 0.62
RGPD6-202ENST00000330331 POGZQ7Z3K3 1410 aa18.91■□□□□ 0.62
RGPD6-202ENST00000330331 ZSCAN20P17040 1043 aaPredicted RBP18.91■□□□□ 0.62
RGPD6-202ENST00000330331 KLHL40Q2TBA0 621 aa18.91■□□□□ 0.62
RGPD6-202ENST00000330331 CAVIN1Q6NZI2 390 aaKnown RBP18.91■□□□□ 0.62
RGPD6-202ENST00000330331 BBXQ8WY36 941 aaPredicted RBP18.91■□□□□ 0.62
RGPD6-202ENST00000330331 CCDC94Q9BW85 323 aaPredicted RBP18.91■□□□□ 0.62
RGPD6-202ENST00000330331 RBM25P49756 843 aaKnown RBP18.9■□□□□ 0.62
RGPD6-202ENST00000330331 HS1BP3Q53T59 392 aa18.9■□□□□ 0.62
RGPD6-202ENST00000330331 CCDC144AA2RUR9 1427 aa18.89■□□□□ 0.62
RGPD6-202ENST00000330331 PIK3C2GO75747 1445 aa18.89■□□□□ 0.62
RGPD6-202ENST00000330331 PRDM15P57071 1507 aaPredicted RBP18.89■□□□□ 0.62
RGPD6-202ENST00000330331 UTP14CQ5TAP6 766 aaKnown RBP18.89■□□□□ 0.61
RGPD6-202ENST00000330331 SASS6Q6UVJ0 657 aa18.89■□□□□ 0.61
RGPD6-202ENST00000330331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61
RGPD6-202ENST00000330331 ZKSCAN5Q9Y2L8 839 aa18.89■□□□□ 0.61
RGPD6-202ENST00000330331 BAG4O95429 457 aaKnown RBP18.89■□□□□ 0.61
RGPD6-202ENST00000330331 RBM42Q9BTD8 480 aaKnown RBP18.89■□□□□ 0.61
RGPD6-202ENST00000330331 TSPOAP1O95153 1857 aa18.89■□□□□ 0.61
RGPD6-202ENST00000330331 TSC1Q92574 1164 aa18.88■□□□□ 0.61
RGPD6-202ENST00000330331 CSPP1Q1MSJ5 1256 aa18.87■□□□□ 0.61
RGPD6-202ENST00000330331 MCTP1Q6DN14 999 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms