RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
TSPO-201ENST00000329563 CDC42BPGQ6DT37 1551 aa21.68■■□□□ 1.06
TSPO-201ENST00000329563 NUTM2BA6NNL0 878 aaPredicted RBP21.67■■□□□ 1.06
TSPO-201ENST00000329563 NUTM2EB1AL46 878 aaPredicted RBP21.67■■□□□ 1.06
TSPO-201ENST00000329563 WAPLQ7Z5K2 1190 aa21.67■■□□□ 1.06
TSPO-201ENST00000329563 NUTM2AQ8IVF1 878 aaPredicted RBP21.67■■□□□ 1.06
TSPO-201ENST00000329563 ORAI2Q96SN7 254 aa21.67■■□□□ 1.06
TSPO-201ENST00000329563 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
TSPO-201ENST00000329563 ABCC11Q96J66 1382 aa21.66■■□□□ 1.06
TSPO-201ENST00000329563 YTHDC2Q9H6S0 1430 aaKnown RBP21.65■■□□□ 1.06
TSPO-201ENST00000329563 C14orf93Q9H972 538 aaKnown RBP21.64■■□□□ 1.05
TSPO-201ENST00000329563 HRCP23327 699 aa21.63■■□□□ 1.05
TSPO-201ENST00000329563 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
TSPO-201ENST00000329563 RXRBP28702 533 aa21.62■■□□□ 1.05
TSPO-201ENST00000329563 PNPLA6Q8IY17 1366 aa21.61■■□□□ 1.05
TSPO-201ENST00000329563 CDK12Q9NYV4 1490 aaPredicted RBP21.61■■□□□ 1.05
TSPO-201ENST00000329563 AFF2P51816 1311 aa21.6■■□□□ 1.05
TSPO-201ENST00000329563 ADGRB1O14514 1584 aa21.6■■□□□ 1.05
TSPO-201ENST00000329563 FMN2Q9NZ56 1722 aa21.59■■□□□ 1.05
TSPO-201ENST00000329563 SOS2Q07890 1332 aaPredicted RBP21.58■■□□□ 1.05
TSPO-201ENST00000329563 C8orf37Q96NL8 207 aa21.56■■□□□ 1.04
TSPO-201ENST00000329563 DHX57Q6P158 1386 aaKnown RBP21.56■■□□□ 1.04
TSPO-201ENST00000329563 NUTM2FA1L443 756 aa21.55■■□□□ 1.04
TSPO-201ENST00000329563 PXDNQ92626 1479 aa21.55■■□□□ 1.04
TSPO-201ENST00000329563 ESCO1Q5FWF5 840 aa21.54■■□□□ 1.04
TSPO-201ENST00000329563 SIRT1Q96EB6 747 aa21.54■■□□□ 1.04
TSPO-201ENST00000329563 NPHP3Q7Z494 1330 aa21.54■■□□□ 1.04
TSPO-201ENST00000329563 DCAF11Q8TEB1 546 aa21.53■■□□□ 1.04
TSPO-201ENST00000329563 RGPD8O14715 1765 aaPredicted RBP21.53■■□□□ 1.04
TSPO-201ENST00000329563 COL22A1Q8NFW1 1626 aaPredicted RBP21.52■■□□□ 1.04
TSPO-201ENST00000329563 DLC1Q96QB1 1528 aa21.52■■□□□ 1.04
TSPO-201ENST00000329563 NGLY1Q96IV0 654 aa21.52■■□□□ 1.04
TSPO-201ENST00000329563 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
TSPO-201ENST00000329563 RBM6P78332 1123 aaKnown RBP21.51■■□□□ 1.03
TSPO-201ENST00000329563 PRAM1Q96QH2 718 aa21.5■■□□□ 1.03
TSPO-201ENST00000329563 FOXO3O43524 673 aa21.49■■□□□ 1.03
TSPO-201ENST00000329563 ADAMTS2O95450 1211 aa21.49■■□□□ 1.03
TSPO-201ENST00000329563 XPCQ01831 940 aaPredicted RBP21.49■■□□□ 1.03
TSPO-201ENST00000329563 QTRT2Q9H974 415 aaKnown RBP21.49■■□□□ 1.03
TSPO-201ENST00000329563 USP32Q8NFA0 1604 aa21.48■■□□□ 1.03
TSPO-201ENST00000329563 SAFB2Q14151 953 aaKnown RBP eCLIP21.48■■□□□ 1.03
TSPO-201ENST00000329563 UPF1Q92900 1129 aaKnown RBP eCLIP21.48■■□□□ 1.03
TSPO-201ENST00000329563 KIF1AQ12756 1690 aa21.47■■□□□ 1.03
TSPO-201ENST00000329563 ADGRB2O60241 1585 aa21.47■■□□□ 1.03
TSPO-201ENST00000329563 MARF1Q9Y4F3 1742 aaKnown RBP21.45■■□□□ 1.02
TSPO-201ENST00000329563 USP21Q9UK80 565 aa21.44■■□□□ 1.02
TSPO-201ENST00000329563 TRAK1Q9UPV9 953 aa21.44■■□□□ 1.02
TSPO-201ENST00000329563 TRPC5Q9UL62 973 aaPredicted RBP21.43■■□□□ 1.02
TSPO-201ENST00000329563 RGS12O14924 1447 aa21.43■■□□□ 1.02
TSPO-201ENST00000329563 ARHGEF28Q8N1W1 1705 aaKnown RBP21.43■■□□□ 1.02
TSPO-201ENST00000329563 FNBP4Q8N3X1 1017 aaPredicted RBP21.4■■□□□ 1.02
TSPO-201ENST00000329563 STAC3Q96MF2 364 aa21.4■■□□□ 1.02
TSPO-201ENST00000329563 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
TSPO-201ENST00000329563 POGKQ9P215 609 aa21.4■■□□□ 1.02
TSPO-201ENST00000329563 PHF8Q9UPP1 1060 aa21.38■■□□□ 1.01
TSPO-201ENST00000329563 ATAD2Q6PL18 1390 aa21.37■■□□□ 1.01
TSPO-201ENST00000329563 SPATA31A3Q5VYP0 1347 aa21.37■■□□□ 1.01
TSPO-201ENST00000329563 MINK1Q8N4C8 1332 aaPredicted RBP21.37■■□□□ 1.01
TSPO-201ENST00000329563 KIAA1210Q9ULL0 1709 aa21.37■■□□□ 1.01
TSPO-201ENST00000329563 ANKARQ7Z5J8 1434 aa21.37■■□□□ 1.01
TSPO-201ENST00000329563 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
TSPO-201ENST00000329563 KRT28Q7Z3Y7 464 aa21.36■■□□□ 1.01
TSPO-201ENST00000329563 ATRNO75882 1429 aa21.35■■□□□ 1.01
TSPO-201ENST00000329563 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.35■■□□□ 1.01
TSPO-201ENST00000329563 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
TSPO-201ENST00000329563 TRPM3Q9HCF6 1732 aaPredicted RBP21.33■■□□□ 1.01
TSPO-201ENST00000329563 PSME1Q06323 249 aa21.33■■□□□ 1.01
TSPO-201ENST00000329563 PMFBP1Q8TBY8 1022 aa21.33■■□□□ 1.01
TSPO-201ENST00000329563 ABCA3Q99758 1704 aa21.32■■□□□ 1
TSPO-201ENST00000329563 TNS3Q68CZ2 1445 aa21.32■■□□□ 1
TSPO-201ENST00000329563 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
TSPO-201ENST00000329563 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
TSPO-201ENST00000329563 WASLO00401 505 aaPredicted RBP21.3■■□□□ 1
TSPO-201ENST00000329563 EIF3AQ14152 1382 aaKnown RBP21.3■■□□□ 1
TSPO-201ENST00000329563 HAP1P54257 671 aaPredicted RBP21.29■■□□□ 1
TSPO-201ENST00000329563 SIN3AQ96ST3 1273 aa21.29■■□□□ 1
TSPO-201ENST00000329563 ATP7BP35670 1465 aa21.28■■□□□ 1
TSPO-201ENST00000329563 SBNO1A3KN83 1393 aa21.28■■□□□ 1
TSPO-201ENST00000329563 CABLES1Q8TDN4 633 aa21.28■■□□□ 1
TSPO-201ENST00000329563 ALS2Q96Q42 1657 aa21.28■■□□□ 1
TSPO-201ENST00000329563 ARHGEF10O15013 1369 aa21.27■■□□□ 1
TSPO-201ENST00000329563 SLIT2O94813 1529 aa21.26■□□□□ 0.99
TSPO-201ENST00000329563 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
TSPO-201ENST00000329563 GJD4Q96KN9 370 aaPredicted RBP21.26■□□□□ 0.99
TSPO-201ENST00000329563 TOPAZ1Q8N9V7 1692 aa21.25■□□□□ 0.99
TSPO-201ENST00000329563 UNC5CLQ8IV45 518 aa21.25■□□□□ 0.99
TSPO-201ENST00000329563 EP400Q96L91 3159 aa21.25■□□□□ 0.99
TSPO-201ENST00000329563 ITSN1Q15811 1721 aa21.24■□□□□ 0.99
TSPO-201ENST00000329563 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
TSPO-201ENST00000329563 CRYBG1Q9Y4K1 1723 aa21.24■□□□□ 0.99
TSPO-201ENST00000329563 PLEKHG5O94827 1062 aa21.23■□□□□ 0.99
TSPO-201ENST00000329563 PLCH1Q4KWH8 1693 aa21.23■□□□□ 0.99
TSPO-201ENST00000329563 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
TSPO-201ENST00000329563 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
TSPO-201ENST00000329563 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
TSPO-201ENST00000329563 NUDT16Q96DE0 195 aaKnown RBP21.21■□□□□ 0.99
TSPO-201ENST00000329563 GLI3P10071 1580 aa21.21■□□□□ 0.99
TSPO-201ENST00000329563 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
TSPO-201ENST00000329563 GPRASP1Q5JY77 1395 aa21.2■□□□□ 0.98
TSPO-201ENST00000329563 QRICH2Q9H0J4 1663 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms