RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 UHRF1BP1LA0JNW5 1464 aa24.32■■□□□ 1.48
SPSB1-201ENST00000328089 SLKQ9H2G2 1235 aaPredicted RBP24.32■■□□□ 1.48
SPSB1-201ENST00000328089 EVC2Q86UK5 1308 aa24.31■■□□□ 1.48
SPSB1-201ENST00000328089 VGFO15240 615 aaPredicted RBP24.3■■□□□ 1.48
SPSB1-201ENST00000328089 RARSP54136 660 aaKnown RBP24.3■■□□□ 1.48
SPSB1-201ENST00000328089 FTSJ3Q8IY81 847 aaKnown RBP24.3■■□□□ 1.48
SPSB1-201ENST00000328089 SPHKAPQ2M3C7 1700 aa24.3■■□□□ 1.48
SPSB1-201ENST00000328089 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
SPSB1-201ENST00000328089 TRMT2AQ8IZ69 625 aaKnown RBP24.3■■□□□ 1.48
SPSB1-201ENST00000328089 PCDHB15Q9Y5E8 787 aa24.3■■□□□ 1.48
SPSB1-201ENST00000328089 ELL2O00472 640 aaPredicted RBP24.3■■□□□ 1.48
SPSB1-201ENST00000328089 DDRGK1Q96HY6 314 aa24.28■■□□□ 1.48
SPSB1-201ENST00000328089 NUTM2FA1L443 756 aa24.28■■□□□ 1.48
SPSB1-201ENST00000328089 IL27Q8NEV9 243 aa24.28■■□□□ 1.48
SPSB1-201ENST00000328089 WAPLQ7Z5K2 1190 aa24.27■■□□□ 1.48
SPSB1-201ENST00000328089 SMC4Q9NTJ3 1288 aa24.26■■□□□ 1.47
SPSB1-201ENST00000328089 NFKBIBQ15653 356 aa24.26■■□□□ 1.47
SPSB1-201ENST00000328089 RNF17Q9BXT8 1623 aaKnown RBP24.25■■□□□ 1.47
SPSB1-201ENST00000328089 EXOSC9Q06265 439 aaKnown RBP24.25■■□□□ 1.47
SPSB1-201ENST00000328089 SYNMO15061 1565 aa24.25■■□□□ 1.47
SPSB1-201ENST00000328089 SOX12O15370 315 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 HMOX1P09601 288 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 THUMPD2Q9BTF0 503 aaKnown RBP24.24■■□□□ 1.47
SPSB1-201ENST00000328089 CABP1Q9NZU7 370 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 SLC24A1O60721 1099 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 MAPK8IP3Q9UPT6 1336 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 ITPRIPQ8IWB1 547 aa24.24■■□□□ 1.47
SPSB1-201ENST00000328089 LAMC1P11047 1609 aa24.23■■□□□ 1.47
SPSB1-201ENST00000328089 FRAT2O75474 233 aaPredicted RBP24.22■■□□□ 1.47
SPSB1-201ENST00000328089 TET3O43151 1660 aa24.21■■□□□ 1.47
SPSB1-201ENST00000328089 ZNF518AQ6AHZ1 1483 aa24.21■■□□□ 1.47
SPSB1-201ENST00000328089 RIPK4P57078 832 aa24.2■■□□□ 1.46
SPSB1-201ENST00000328089 PDZRN3Q9UPQ7 1066 aa24.19■■□□□ 1.46
SPSB1-201ENST00000328089 KDM5AP29375 1690 aaKnown RBP24.19■■□□□ 1.46
SPSB1-201ENST00000328089 NCKAP5LQ9HCH0 1330 aa24.18■■□□□ 1.46
SPSB1-201ENST00000328089 MAP3K4Q9Y6R4 1608 aa24.18■■□□□ 1.46
SPSB1-201ENST00000328089 POLR3AO14802 1390 aaPredicted RBP24.18■■□□□ 1.46
SPSB1-201ENST00000328089 NPC1L1Q9UHC9 1359 aa24.18■■□□□ 1.46
SPSB1-201ENST00000328089 PDE3AQ14432 1141 aa24.17■■□□□ 1.46
SPSB1-201ENST00000328089 CEP152O94986 1710 aa24.17■■□□□ 1.46
SPSB1-201ENST00000328089 PPRC1Q5VV67 1664 aaKnown RBP24.16■■□□□ 1.46
SPSB1-201ENST00000328089 FYB1O15117 783 aa24.16■■□□□ 1.46
SPSB1-201ENST00000328089 INSRP06213 1382 aa24.16■■□□□ 1.46
SPSB1-201ENST00000328089 CDK19Q9BWU1 502 aa24.16■■□□□ 1.46
SPSB1-201ENST00000328089 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
SPSB1-201ENST00000328089 ZRANB1Q9UGI0 708 aa24.15■■□□□ 1.46
SPSB1-201ENST00000328089 EFCAB6Q5THR3 1501 aa24.15■■□□□ 1.46
SPSB1-201ENST00000328089 MYOM1P52179 1685 aa24.14■■□□□ 1.46
SPSB1-201ENST00000328089 FAM69CQ0P6D2 419 aa24.14■■□□□ 1.46
SPSB1-201ENST00000328089 SSH1Q8WYL5 1049 aa24.14■■□□□ 1.46
SPSB1-201ENST00000328089 A0A1W2PP64 1363 aa24.14■■□□□ 1.46
SPSB1-201ENST00000328089 INO80Q9ULG1 1556 aaPredicted RBP24.14■■□□□ 1.45
SPSB1-201ENST00000328089 MROH2AA6NES4 1674 aa24.13■■□□□ 1.45
SPSB1-201ENST00000328089 TMPOP42166 694 aaKnown RBP24.13■■□□□ 1.45
SPSB1-201ENST00000328089 MROH1Q8NDA8 1641 aa24.13■■□□□ 1.45
SPSB1-201ENST00000328089 NOB1Q9ULX3 412 aaKnown RBP24.12■■□□□ 1.45
SPSB1-201ENST00000328089 YEATS2Q9ULM3 1422 aa24.12■■□□□ 1.45
SPSB1-201ENST00000328089 DZIP1LQ8IYY4 767 aaKnown RBP24.12■■□□□ 1.45
SPSB1-201ENST00000328089 MFAP1P55081 439 aaKnown RBP24.11■■□□□ 1.45
SPSB1-201ENST00000328089 KIDINS220Q9ULH0 1771 aa24.11■■□□□ 1.45
SPSB1-201ENST00000328089 ZKSCAN2Q63HK3 967 aa24.11■■□□□ 1.45
SPSB1-201ENST00000328089 C1orf115Q9H7X2 142 aa24.11■■□□□ 1.45
SPSB1-201ENST00000328089 TERF2IPQ9NYB0 399 aa24.11■■□□□ 1.45
SPSB1-201ENST00000328089 BRPF3Q9ULD4 1205 aa24.11■■□□□ 1.45
SPSB1-201ENST00000328089 MYOM2P54296 1465 aa24.1■■□□□ 1.45
SPSB1-201ENST00000328089 POGZQ7Z3K3 1410 aa24.1■■□□□ 1.45
SPSB1-201ENST00000328089 DIAPH1O60610 1272 aaKnown RBP24.09■■□□□ 1.45
SPSB1-201ENST00000328089 TRIM27P14373 513 aa24.09■■□□□ 1.45
SPSB1-201ENST00000328089 ABCA9Q8IUA7 1624 aa24.09■■□□□ 1.45
SPSB1-201ENST00000328089 PRKAR2BP31323 418 aa24.08■■□□□ 1.45
SPSB1-201ENST00000328089 WDR63Q8IWG1 891 aa24.08■■□□□ 1.45
SPSB1-201ENST00000328089 KIF1BO60333 1816 aa24.08■■□□□ 1.45
SPSB1-201ENST00000328089 HDGFL2Q7Z4V5 671 aaPredicted RBP24.08■■□□□ 1.45
SPSB1-201ENST00000328089 TXNDC2Q86VQ3 553 aa24.08■■□□□ 1.44
SPSB1-201ENST00000328089 RWDD1Q9H446 243 aaPredicted RBP24.07■■□□□ 1.44
SPSB1-201ENST00000328089 EMILIN1Q9Y6C2 1016 aa24.07■■□□□ 1.44
SPSB1-201ENST00000328089 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
SPSB1-201ENST00000328089 TRIM35Q9UPQ4 493 aa24.06■■□□□ 1.44
SPSB1-201ENST00000328089 PMFBP1Q8TBY8 1022 aa24.06■■□□□ 1.44
SPSB1-201ENST00000328089 RPGRIP1LQ68CZ1 1315 aa24.05■■□□□ 1.44
SPSB1-201ENST00000328089 DEPDC5O75140 1603 aa24.05■■□□□ 1.44
SPSB1-201ENST00000328089 MVPQ14764 893 aaKnown RBP24.05■■□□□ 1.44
SPSB1-201ENST00000328089 ANKRD36BQ8N2N9 1353 aa24.05■■□□□ 1.44
SPSB1-201ENST00000328089 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
SPSB1-201ENST00000328089 TMEM57Q8N5G2 664 aa24.05■■□□□ 1.44
SPSB1-201ENST00000328089 UPF2Q9HAU5 1272 aaKnown RBP24.05■■□□□ 1.44
SPSB1-201ENST00000328089 DCTN1Q14203 1278 aa24.04■■□□□ 1.44
SPSB1-201ENST00000328089 PHACTR3Q96KR7 559 aa24.04■■□□□ 1.44
SPSB1-201ENST00000328089 PLEKHG5O94827 1062 aa24.04■■□□□ 1.44
SPSB1-201ENST00000328089 LNPKQ9C0E8 428 aa24.04■■□□□ 1.44
SPSB1-201ENST00000328089 NME9Q86XW9 330 aa24.03■■□□□ 1.44
SPSB1-201ENST00000328089 GSE1Q14687 1217 aa24.02■■□□□ 1.44
SPSB1-201ENST00000328089 USP19O94966 1318 aa24.01■■□□□ 1.43
SPSB1-201ENST00000328089 ARAP3Q8WWN8 1544 aa24.01■■□□□ 1.43
SPSB1-201ENST00000328089 SLC52A1Q9NWF4 448 aa24.01■■□□□ 1.43
SPSB1-201ENST00000328089 SBNO2Q9Y2G9 1366 aa24■■□□□ 1.43
SPSB1-201ENST00000328089 FAM83GA6ND36 823 aa24■■□□□ 1.43
SPSB1-201ENST00000328089 APBB1O00213 710 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms